FFCP PHASE1:Mm9::chr2:90894211..90894271,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19182|HGNC=|UniProt=B7ZCF1,A2AGN7|association_with_transcript=0bp_to_ENSMUST00000002171,ENSMUST00000111441,ENSMUST00000152269_5end|description=CAGE_peak_1_at_Psmc3_5end|id=chr2:90894211..90894271,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!3.11e-07!47;UBERON:0002107!5.06e-07!22;UBERON:0007499!5.06e-07!22;UBERON:0006925!5.06e-07!22;UBERON:0009497!5.06e-07!22;UBERON:0000015!5.06e-07!22;UBERON:0002423!5.06e-07!22;UBERON:0006235!5.06e-07!22;UBERON:0008835!5.06e-07!22;UBERON:0003894!5.06e-07!22;UBERON:0004161!5.06e-07!22;UBERON:0008836!5.06e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.11e-07,47;UBERON:0002107,5.06e-07,22;UBERON:0007499,5.06e-07,22;UBERON:0006925,5.06e-07,22;UBERON:0009497,5.06e-07,22;UBERON:0000015,5.06e-07,22;UBERON:0002423,5.06e-07,22;UBERON:0006235,5.06e-07,22;UBERON:0008835,5.06e-07,22;UBERON:0003894,5.06e-07,22;UBERON:0004161,5.06e-07,22;UBERON:0008836,5.06e-07,22|phase1_expression=49.005547214067,65.6073766361999,66.4298889508723,45.6720959073313,59.105696133669,63.1226062388706,56.7678716647127,39.1243670027976,60.2575730809134,36.748130632553,45.0303256433078,43.3162823344677,49.3058102201872,35.9297853942079,81.2787818830217,107.109416449218,142.011061260014,30.2843678743908,28.2455733227822,32.6780031884483,68.0346321208558,59.5745707205312,62.4267496042056,65.7568857680901,57.3523202667925,57.423196411502,59.8759174661114,61.4093013154784,48.4559719613753,51.6661766007858,65.4105006433149,88.2692636108887,69.5023209970564,63.3926724061755,59.5034336687626,53.361321160076,54.3090487657902,58.5944283031671,81.2588758304752,83.7637990358077,42.940898626264,47.1301384621327,50.9785870682711,58.667917176619,56.4669506892696,123.710510956973,44.5963066278382,59.3028425354815,123.683320879508,119.768817829759,65.3736588990443,63.2511283205875,33.2209559994318,41.3456420946466,53.1028202645093,98.2731045657317,83.3812310221782,63.9433394424028,47.3420518411459,49.7251520515711,36.7622214033584,96.2318471076335,85.3723004266694,40.0455374190223,49.4433181283487,34.8135256323589,27.5632101676932,37.2691756161908,38.7799150033706,42.5268705744826,45.4301916518985,53.1310830991075,59.8553745978873,41.4018901346545,41.2135525378416,34.0110951045708,56.1590993096882,76.3570281749423,72.3486771636907,46.5558595687584,52.9713456457952,53.1331637967895,68.120651756337,56.8390236131997,56.3825534296429,61.2827457785229,56.9486723196412,52.1918448310842,67.9263954198661,72.3219830221937,38.5519769973231,74.8568772973806,66.6371907033596,110.639154285753,68.2265238320053,65.8599524033083,65.8684330417916,51.8108180637296,71.7009372703918,55.1209736236131,39.7178443770239,65.4465034813021,91.7298862943925,120.881339536066,107.379556341562,107.424582961442,94.5330712177645,63.7146048832355,32.1082975722493,25.383605780085,61.0668350216798,55.4127170528097,55.8089503359662,55.3152090828125,37.1580314548827,49.3869703925625,28.1802263217186,26.172483602504,61.0381280845413,72.1480150765445,67.7983461673408,67.8825354389311,41.0061874679869,47.1377083188591,45.0310419648928,52.3686963177612,59.5481168794424,40.1934829765583,63.6621837636054,52.4267237916879,67.2525886143381,47.9999625071142,86.9121600961382,103.053329304123,74.3881199523225,72.5218445912877,43.3835690002347,49.8871952146473,21.9868799837297,39.5630689066571,61.6770899643216,48.2794419310293,54.1987010714101,52.4452766068288,49.2584253855614,48.9394411488126,45.0705295132296,30.2682943764648,68.1194857667781,59.9466274131987,46.0991945309546,71.8962002362445,55.8874970943452,47.3622946470147,54.3264840116971,45.5788471014349,49.1549231119264,57.6459311936962,66.7784223579643,61.1021028979731,84.4293815931946,81.0279276574567,54.4512891845984,76.9348146132349,76.9792893308017,76.7362017676346,81.2868406240846,85.7057612975024,62.6973028170361,65.6669856316381,59.9098502543874,53.655395385097,54.4484285921806,60.2586820234069,89.3732281397541,40.8531311145759,47.2498859666831,45.2210468994661,60.5738631520064,48.7697010906921,41.7530574683582,43.9670083678887,45.5874989881984,51.5511446765035,64.5359523700536,62.5856027951241,61.8284613648663,61.6765063327568,63.363328313714,58.4232615625244,61.8154822641625,65.7166201739412,73.9704813717019,59.0664810192298,39.4477074855781,54.1712532068536,50.8155516379179,48.8145306436617,44.2023394498558,70.5576507342498,62.4854936808672,64.4133195671799,80.3386619406174,98.7723025839277,92.972404688545,96.915570437872,93.1127957173228,75.9708053220113,64.9295922042621,63.86854251408,54.6395714231869,94.1745647235119,83.3855597858656,72.1953438476897,72.3927401625781,82.8458719666527,103.691705015665,88.2871644094962,23.2789019609922,48.6992928250146,44.326473592231,54.6579176196106,48.8155716440084,36.1813516074322,29.5174114698657,33.953254727257,41.6156780440344,44.0714732401062,41.1393303136317,34.0835694608735,31.428666699593,32.1120910050956,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| ||
|EntrezGene=19182 | |||
|HGNC= | |||
|UniProt=B7ZCF1,A2AGN7 | |||
|association_with_transcript=0bp_to_ENSMUST00000002171,ENSMUST00000111441,ENSMUST00000152269_5end | |||
|description=CAGE_peak_1_at_Psmc3_5end | |||
|id=chr2:90894211..90894271,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.11e-07!47;UBERON:0002107!5.06e-07!22;UBERON:0007499!5.06e-07!22;UBERON:0006925!5.06e-07!22;UBERON:0009497!5.06e-07!22;UBERON:0000015!5.06e-07!22;UBERON:0002423!5.06e-07!22;UBERON:0006235!5.06e-07!22;UBERON:0008835!5.06e-07!22;UBERON:0003894!5.06e-07!22;UBERON:0004161!5.06e-07!22;UBERON:0008836!5.06e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.11e-07,47;UBERON:0002107,5.06e-07,22;UBERON:0007499,5.06e-07,22;UBERON:0006925,5.06e-07,22;UBERON:0009497,5.06e-07,22;UBERON:0000015,5.06e-07,22;UBERON:0002423,5.06e-07,22;UBERON:0006235,5.06e-07,22;UBERON:0008835,5.06e-07,22;UBERON:0003894,5.06e-07,22;UBERON:0004161,5.06e-07,22;UBERON:0008836,5.06e-07,22 | |||
|phase1_expression=49.005547214067,65.6073766361999,66.4298889508723,45.6720959073313,59.105696133669,63.1226062388706,56.7678716647127,39.1243670027976,60.2575730809134,36.748130632553,45.0303256433078,43.3162823344677,49.3058102201872,35.9297853942079,81.2787818830217,107.109416449218,142.011061260014,30.2843678743908,28.2455733227822,32.6780031884483,68.0346321208558,59.5745707205312,62.4267496042056,65.7568857680901,57.3523202667925,57.423196411502,59.8759174661114,61.4093013154784,48.4559719613753,51.6661766007858,65.4105006433149,88.2692636108887,69.5023209970564,63.3926724061755,59.5034336687626,53.361321160076,54.3090487657902,58.5944283031671,81.2588758304752,83.7637990358077,42.940898626264,47.1301384621327,50.9785870682711,58.667917176619,56.4669506892696,123.710510956973,44.5963066278382,59.3028425354815,123.683320879508,119.768817829759,65.3736588990443,63.2511283205875,33.2209559994318,41.3456420946466,53.1028202645093,98.2731045657317,83.3812310221782,63.9433394424028,47.3420518411459,49.7251520515711,36.7622214033584,96.2318471076335,85.3723004266694,40.0455374190223,49.4433181283487,34.8135256323589,27.5632101676932,37.2691756161908,38.7799150033706,42.5268705744826,45.4301916518985,53.1310830991075,59.8553745978873,41.4018901346545,41.2135525378416,34.0110951045708,56.1590993096882,76.3570281749423,72.3486771636907,46.5558595687584,52.9713456457952,53.1331637967895,68.120651756337,56.8390236131997,56.3825534296429,61.2827457785229,56.9486723196412,52.1918448310842,67.9263954198661,72.3219830221937,38.5519769973231,74.8568772973806,66.6371907033596,110.639154285753,68.2265238320053,65.8599524033083,65.8684330417916,51.8108180637296,71.7009372703918,55.1209736236131,39.7178443770239,65.4465034813021,91.7298862943925,120.881339536066,107.379556341562,107.424582961442,94.5330712177645,63.7146048832355,32.1082975722493,25.383605780085,61.0668350216798,55.4127170528097,55.8089503359662,55.3152090828125,37.1580314548827,49.3869703925625,28.1802263217186,26.172483602504,61.0381280845413,72.1480150765445,67.7983461673408,67.8825354389311,41.0061874679869,47.1377083188591,45.0310419648928,52.3686963177612,59.5481168794424,40.1934829765583,63.6621837636054,52.4267237916879,67.2525886143381,47.9999625071142,86.9121600961382,103.053329304123,74.3881199523225,72.5218445912877,43.3835690002347,49.8871952146473,21.9868799837297,39.5630689066571,61.6770899643216,48.2794419310293,54.1987010714101,52.4452766068288,49.2584253855614,48.9394411488126,45.0705295132296,30.2682943764648,68.1194857667781,59.9466274131987,46.0991945309546,71.8962002362445,55.8874970943452,47.3622946470147,54.3264840116971,45.5788471014349,49.1549231119264,57.6459311936962,66.7784223579643,61.1021028979731,84.4293815931946,81.0279276574567,54.4512891845984,76.9348146132349,76.9792893308017,76.7362017676346,81.2868406240846,85.7057612975024,62.6973028170361,65.6669856316381,59.9098502543874,53.655395385097,54.4484285921806,60.2586820234069,89.3732281397541,40.8531311145759,47.2498859666831,45.2210468994661,60.5738631520064,48.7697010906921,41.7530574683582,43.9670083678887,45.5874989881984,51.5511446765035,64.5359523700536,62.5856027951241,61.8284613648663,61.6765063327568,63.363328313714,58.4232615625244,61.8154822641625,65.7166201739412,73.9704813717019,59.0664810192298,39.4477074855781,54.1712532068536,50.8155516379179,48.8145306436617,44.2023394498558,70.5576507342498,62.4854936808672,64.4133195671799,80.3386619406174,98.7723025839277,92.972404688545,96.915570437872,93.1127957173228,75.9708053220113,64.9295922042621,63.86854251408,54.6395714231869,94.1745647235119,83.3855597858656,72.1953438476897,72.3927401625781,82.8458719666527,103.691705015665,88.2871644094962,23.2789019609922,48.6992928250146,44.326473592231,54.6579176196106,48.8155716440084,36.1813516074322,29.5174114698657,33.953254727257,41.6156780440344,44.0714732401062,41.1393303136317,34.0835694608735,31.428666699593,32.1120910050956,37.6978209848181,52.2149456465961,61.9622984003986,38.9070812289673,61.9725277352877,75.8359612251555,46.8853943777292,106.542731280245,45.7486918153572,66.7650252747252,39.4224817851022,45.4040716109849,36.761781223595,41.3291734951695,48.9820949026622,45.007402118342,46.6439577976898,55.9099090573944,26.2589157635297,47.5435161791571,38.1155484887368,20.1263550026493,50.4431525691859,75.7475584803542,87.3715079628131,79.2141334974772,65.8523221124123,37.8145231971031,41.8653834932518,50.1676546678958,51.3356224873999,58.1507634601901,62.1969790592493,69.1008139762852,7.14923172082955,57.7996111840506,70.5004826616012,46.7254736368871,36.8867685975929,43.1652538597011,40.1499610269175,40.4938382322417,50.219745525634,27.114505070569,48.2957191740367,66.7789324412994,54.8979050766079,69.3598636673792,69.2359595218192,83.8759997697263,59.1706098358597,58.2235448313,68.3483523191411,52.6286513306217,66.6700298530962,103.414282895575,109.902159087704,78.9284697562503,59.3224720678555,57.6599983573471,51.6867902028545,29.5947891584685,47.766735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| |||
|short_description=p1@Psmc3 | |||
}} |
Revision as of 00:50, 14 September 2013
Short description: | p1@Psmc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Psmc3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000002171, ENSMUST00000111441, ENSMUST00000152269_5end |
EntrezGene: | Psmc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 3.11e-07 | 47 |
liver | 5.06e-07 | 22 |
epithelial sac | 5.06e-07 | 22 |
digestive gland | 5.06e-07 | 22 |
epithelium of foregut-midgut junction | 5.06e-07 | 22 |
anatomical boundary | 5.06e-07 | 22 |
hepatobiliary system | 5.06e-07 | 22 |
foregut-midgut junction | 5.06e-07 | 22 |
hepatic diverticulum | 5.06e-07 | 22 |
liver primordium | 5.06e-07 | 22 |
septum transversum | 5.06e-07 | 22 |
liver bud | 5.06e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.