FFCP PHASE1:Hg19::chr7:55495851..55495864,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55915|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6509|TSSclassifier=S|UniProt=|association_with_transcript=102bp_to_ENST00000466041_5end|description=CAGE_peak_22_at_LANCL2_5end|id=chr7:55495851..55495864,+|ontology_enrichment_celltype=CL:0000242!1.79e-11!2|ontology_enrichment_celltype_v019=CL:0000123;3.52e-50;2!CL:0000242;3.52e-50;2!CL:0000312;4.66e-21;5!CL:0000240;8.34e-18;6!CL:0000311;8.34e-18;6!CL:0000079;8.34e-18;6!CL:0000237;8.34e-18;6!CL:0000362;2.31e-12;9!CL:0002159;1.93e-08;14|ontology_enrichment_celltype_v019_2=CL:0000242,4.52e-50,2;CL:0000312,5.15e-21,5;CL:0000240,9.07e-18,6;CL:0000311,9.07e-18,6;CL:0000079,9.07e-18,6;CL:0000237,9.07e-18,6;CL:0000036,9.07e-18,6;CL:0000357,9.07e-18,6;CL:0000114,9.07e-18,6;CL:0000362,2.45e-12,9;CL:0002159,2.00e-08,14|ontology_enrichment_development_v019=CL:0000357;8.34e-18;6!CL:0000114;8.34e-18;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!7.23e-15!34;UBERON:0003528!7.23e-15!34;UBERON:0001950!8.27e-14!20;UBERON:0007023!1.28e-12!115;UBERON:0002619!1.67e-12!22;UBERON:0002148!4.08e-11!2;UBERON:0009662!4.08e-11!2;UBERON:0000956!6.36e-11!25;UBERON:0000203!6.36e-11!25;UBERON:0001869!1.66e-10!32;UBERON:0002791!3.73e-10!33;UBERON:0001893!8.02e-10!34;UBERON:0001872!1.92e-09!5;UBERON:0003075!3.37e-08!86;UBERON:0007284!3.37e-08!86;UBERON:0001049!3.72e-08!57;UBERON:0005068!3.72e-08!57;UBERON:0006241!3.72e-08!57;UBERON:0007135!3.72e-08!57;UBERON:0005743!4.90e-08!86;UBERON:0002780!6.10e-08!41;UBERON:0001890!6.10e-08!41;UBERON:0006240!6.10e-08!41;UBERON:0002616!8.11e-08!59;UBERON:0003080!1.01e-07!42;UBERON:0002346!1.02e-07!90;UBERON:0000988!1.09e-07!3;UBERON:0006331!1.09e-07!3;UBERON:0000955!1.41e-07!69;UBERON:0006238!1.41e-07!69;UBERON:0001017!2.76e-07!82;UBERON:0000073!4.89e-07!94;UBERON:0001016!4.89e-07!94;UBERON:0002426!8.34e-07!1;UBERON:0003831!8.34e-07!1;UBERON:0003898!8.34e-07!1;UBERON:0004830!8.34e-07!1;UBERON:0001774!8.34e-07!1;UBERON:0003830!8.34e-07!1;UBERON:0005175!8.34e-07!1;UBERON:0003897!8.34e-07!1;UBERON:0001103!8.34e-07!1;UBERON:0010084!8.34e-07!1|ontology_enrichment_uberon_v019=UBERON:0001003;5.74e-08;15!UBERON:0007376;5.74e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0001003,5.93e-08,15;UBERON:0007376,5.93e-08,15;UBERON:0007383,5.93e-08,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658156191461918,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78352179414492,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.1516839638757,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0.476128862927481,0,0.124149428591716,0,0,0.202117188958219,0,0,0,0,0.665320713092027,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p22@LANCL2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=55915 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6509 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=102bp_to_ENST00000466041_5end | |||
|description=CAGE_peak_22_at_LANCL2_5end | |||
|id=chr7:55495851..55495864,+ | |||
|ontology_enrichment_celltype=CL:0000242!1.79e-11!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;3.52e-50;2!CL:0000242;3.52e-50;2!CL:0000312;4.66e-21;5!CL:0000240;8.34e-18;6!CL:0000311;8.34e-18;6!CL:0000079;8.34e-18;6!CL:0000237;8.34e-18;6!CL:0000362;2.31e-12;9!CL:0002159;1.93e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.52e-50,2;CL:0000312,5.15e-21,5;CL:0000240,9.07e-18,6;CL:0000311,9.07e-18,6;CL:0000079,9.07e-18,6;CL:0000237,9.07e-18,6;CL:0000036,9.07e-18,6;CL:0000357,9.07e-18,6;CL:0000114,9.07e-18,6;CL:0000362,2.45e-12,9;CL:0002159,2.00e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000357;8.34e-18;6!CL:0000114;8.34e-18;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!7.23e-15!34;UBERON:0003528!7.23e-15!34;UBERON:0001950!8.27e-14!20;UBERON:0007023!1.28e-12!115;UBERON:0002619!1.67e-12!22;UBERON:0002148!4.08e-11!2;UBERON:0009662!4.08e-11!2;UBERON:0000956!6.36e-11!25;UBERON:0000203!6.36e-11!25;UBERON:0001869!1.66e-10!32;UBERON:0002791!3.73e-10!33;UBERON:0001893!8.02e-10!34;UBERON:0001872!1.92e-09!5;UBERON:0003075!3.37e-08!86;UBERON:0007284!3.37e-08!86;UBERON:0001049!3.72e-08!57;UBERON:0005068!3.72e-08!57;UBERON:0006241!3.72e-08!57;UBERON:0007135!3.72e-08!57;UBERON:0005743!4.90e-08!86;UBERON:0002780!6.10e-08!41;UBERON:0001890!6.10e-08!41;UBERON:0006240!6.10e-08!41;UBERON:0002616!8.11e-08!59;UBERON:0003080!1.01e-07!42;UBERON:0002346!1.02e-07!90;UBERON:0000988!1.09e-07!3;UBERON:0006331!1.09e-07!3;UBERON:0000955!1.41e-07!69;UBERON:0006238!1.41e-07!69;UBERON:0001017!2.76e-07!82;UBERON:0000073!4.89e-07!94;UBERON:0001016!4.89e-07!94;UBERON:0002426!8.34e-07!1;UBERON:0003831!8.34e-07!1;UBERON:0003898!8.34e-07!1;UBERON:0004830!8.34e-07!1;UBERON:0001774!8.34e-07!1;UBERON:0003830!8.34e-07!1;UBERON:0005175!8.34e-07!1;UBERON:0003897!8.34e-07!1;UBERON:0001103!8.34e-07!1;UBERON:0010084!8.34e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;5.74e-08;15!UBERON:0007376;5.74e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,5.93e-08,15;UBERON:0007376,5.93e-08,15;UBERON:0007383,5.93e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658156191461918,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78352179414492,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.1516839638757,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0.476128862927481,0,0.124149428591716,0,0,0.202117188958219,0,0,0,0,0.665320713092027,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p22@LANCL2 | |||
}} |
Revision as of 01:37, 14 September 2013
Short description: | p22@LANCL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_22_at_LANCL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 102bp_to_ENST00000466041_5end |
EntrezGene: | LANCL2 |
HGNC: | 6509 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.52e-50 | 2 |
keratinocyte | 5.15e-21 | 5 |
stratified squamous epithelial cell | 9.07e-18 | 6 |
keratin accumulating cell | 9.07e-18 | 6 |
stratified epithelial cell | 9.07e-18 | 6 |
keratinizing barrier epithelial cell | 9.07e-18 | 6 |
epithelial fate stem cell | 9.07e-18 | 6 |
stratified epithelial stem cell | 9.07e-18 | 6 |
surface ectodermal cell | 9.07e-18 | 6 |
epidermal cell | 2.45e-12 | 9 |
general ecto-epithelial cell | 2.00e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 5.93e-08 | 15 |
outer epithelium | 5.93e-08 | 15 |
enveloping layer of ectoderm | 5.93e-08 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.