FFCP PHASE1:Mm9::chr3:36961964..36961971,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=21744|HGNC=|MCL_coexpression_id=550|UniProt=Q5SUE7|association_with_transcript=-477bp_to_ENSMUST00000144629_5end|description=CAGE_peak_6_at_Adad1_5end|id=chr3:36961964..36961971,+|ontology_enrichment_celltype=CL:0000239!1.45e-33!6;CL:0000677!1.45e-33!6;CL:0000212!1.45e-33!6;CL:0000584!1.45e-33!6;CL:0000075!8.31e-29!7;CL:0002563!1.87e-22!9;CL:0002251!1.87e-22!9;CL:0002076!1.58e-13!15;CL:0000066!2.31e-11!25;CL:0000223!3.69e-10!20|ontology_enrichment_celltype_v019_2=CL:0000239,1.60e-22,6;CL:0000677,1.60e-22,6;CL:0000584,1.60e-22,6;CL:0000075,1.96e-19,7;CL:0002563,2.64e-15,9;CL:0002251,2.64e-15,9;CL:0002076,1.73e-09,15;CL:0000223,2.75e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.17e-52!15;UBERON:0001242!9.51e-39!13;UBERON:0000060!9.51e-39!13;UBERON:0001262!9.51e-39!13;UBERON:0004786!9.51e-39!13;UBERON:0004923!9.30e-33!24;UBERON:0000331!2.83e-24!3;UBERON:0002116!2.83e-24!3;UBERON:0001204!2.83e-24!3;UBERON:0001168!2.83e-24!3;UBERON:0003350!1.87e-22!9;UBERON:0004808!1.87e-22!9;UBERON:0001277!1.87e-22!9;UBERON:0000485!2.11e-18!11;UBERON:0001962!2.26e-17!2;UBERON:0001961!2.26e-17!2;UBERON:0001744!2.26e-17!2;UBERON:0002465!6.55e-12!3;UBERON:0000160!1.98e-11!43;UBERON:0003199!1.19e-09!1;UBERON:0005409!3.54e-08!59;UBERON:0000064!2.04e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.27e-35,15;UBERON:0001962,6.69e-30,2;UBERON:0001961,6.69e-30,2;UBERON:0001744,6.69e-30,2;UBERON:0004923,3.63e-22,24;UBERON:0002465,2.49e-20,3;UBERON:0001242,1.97e-18,13;UBERON:0001262,1.97e-18,13;UBERON:0004786,1.97e-18,13;UBERON:0003199,4.83e-16,1;UBERON:0003350,2.64e-15,9;UBERON:0004808,2.64e-15,9;UBERON:0001277,2.64e-15,9;UBERON:0000485,1.14e-12,11;UBERON:0000160,4.66e-08,31|phase1_expression=0,0.697950815278722,0.454999239389536,3.93203474698879,6.51164448930251,0,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67982572424835,4.5881856213434,0,0,0.215471232685889,3.80046838912748,0.504060259519861,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p6@Adad1}} | ||
|EntrezGene=21744 | |||
|HGNC= | |||
|MCL_coexpression_id=550 | |||
|UniProt=Q5SUE7 | |||
|association_with_transcript=-477bp_to_ENSMUST00000144629_5end | |||
|description=CAGE_peak_6_at_Adad1_5end | |||
|id=chr3:36961964..36961971,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.45e-33!6;CL:0000677!1.45e-33!6;CL:0000212!1.45e-33!6;CL:0000584!1.45e-33!6;CL:0000075!8.31e-29!7;CL:0002563!1.87e-22!9;CL:0002251!1.87e-22!9;CL:0002076!1.58e-13!15;CL:0000066!2.31e-11!25;CL:0000223!3.69e-10!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.60e-22,6;CL:0000677,1.60e-22,6;CL:0000584,1.60e-22,6;CL:0000075,1.96e-19,7;CL:0002563,2.64e-15,9;CL:0002251,2.64e-15,9;CL:0002076,1.73e-09,15;CL:0000223,2.75e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.17e-52!15;UBERON:0001242!9.51e-39!13;UBERON:0000060!9.51e-39!13;UBERON:0001262!9.51e-39!13;UBERON:0004786!9.51e-39!13;UBERON:0004923!9.30e-33!24;UBERON:0000331!2.83e-24!3;UBERON:0002116!2.83e-24!3;UBERON:0001204!2.83e-24!3;UBERON:0001168!2.83e-24!3;UBERON:0003350!1.87e-22!9;UBERON:0004808!1.87e-22!9;UBERON:0001277!1.87e-22!9;UBERON:0000485!2.11e-18!11;UBERON:0001962!2.26e-17!2;UBERON:0001961!2.26e-17!2;UBERON:0001744!2.26e-17!2;UBERON:0002465!6.55e-12!3;UBERON:0000160!1.98e-11!43;UBERON:0003199!1.19e-09!1;UBERON:0005409!3.54e-08!59;UBERON:0000064!2.04e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.27e-35,15;UBERON:0001962,6.69e-30,2;UBERON:0001961,6.69e-30,2;UBERON:0001744,6.69e-30,2;UBERON:0004923,3.63e-22,24;UBERON:0002465,2.49e-20,3;UBERON:0001242,1.97e-18,13;UBERON:0001262,1.97e-18,13;UBERON:0004786,1.97e-18,13;UBERON:0003199,4.83e-16,1;UBERON:0003350,2.64e-15,9;UBERON:0004808,2.64e-15,9;UBERON:0001277,2.64e-15,9;UBERON:0000485,1.14e-12,11;UBERON:0000160,4.66e-08,31 | |||
|phase1_expression=0,0.697950815278722,0.454999239389536,3.93203474698879,6.51164448930251,0,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67982572424835,4.5881856213434,0,0,0.215471232685889,3.80046838912748,0.504060259519861,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@Adad1 | |||
}} |
Revision as of 02:10, 14 September 2013
Short description: | p6@Adad1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Adad1_5end |
Coexpression cluster: | MCL_coexpression_mm9:550 |
Association with transcript: | -477bp_to_ENSMUST00000144629_5end |
EntrezGene: | Adad1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.60e-22 | 6 |
gut absorptive cell | 1.60e-22 | 6 |
enterocyte | 1.60e-22 | 6 |
columnar/cuboidal epithelial cell | 1.96e-19 | 7 |
intestinal epithelial cell | 2.64e-15 | 9 |
epithelial cell of alimentary canal | 2.64e-15 | 9 |
endo-epithelial cell | 1.73e-09 | 15 |
endodermal cell | 2.75e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.27e-35 | 15 |
gut-associated lymphoid tissue | 6.69e-30 | 2 |
mucosa-associated lymphoid tissue | 6.69e-30 | 2 |
lymphoid tissue | 6.69e-30 | 2 |
organ component layer | 3.63e-22 | 24 |
lymphoid system | 2.49e-20 | 3 |
intestinal mucosa | 1.97e-18 | 13 |
wall of intestine | 1.97e-18 | 13 |
gastrointestinal system mucosa | 1.97e-18 | 13 |
egg chamber | 4.83e-16 | 1 |
epithelium of mucosa | 2.64e-15 | 9 |
gastrointestinal system epithelium | 2.64e-15 | 9 |
intestinal epithelium | 2.64e-15 | 9 |
simple columnar epithelium | 1.14e-12 | 11 |
intestine | 4.66e-08 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.