FFCP PHASE1:Mm9::chr3:60806700..60806705,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=18441|HGNC=|MCL_coexpression_id=1500|UniProt=P49650,Q544J5|association_with_transcript=-11bp_to_ENSMUST00000029331,NM_008772,uc008pjj.1,uc008pjk.1_5end|description=CAGE_peak_2_at_P2ry1_5end|id=chr3:60806700..60806705,+|ontology_enrichment_celltype=CL:0002563!4.44e-07!9;CL:0002251!4.44e-07!9|ontology_enrichment_celltype_v019_2=CL:0000066,1.27e-13,25;CL:0002563,1.44e-13,9;CL:0002251,1.44e-13,9;CL:0000075,3.43e-11,7;CL:0002076,1.44e-10,15;CL:0000239,4.09e-10,6;CL:0000677,4.09e-10,6;CL:0000584,4.09e-10,6;CL:0000223,5.52e-10,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.16e-09!15;UBERON:0001242!4.73e-09!13;UBERON:0000060!4.73e-09!13;UBERON:0001262!4.73e-09!13;UBERON:0004786!4.73e-09!13;UBERON:0005409!5.59e-08!59;UBERON:0000485!1.71e-07!11;UBERON:0000160!4.39e-07!43;UBERON:0003350!4.44e-07!9;UBERON:0004808!4.44e-07!9;UBERON:0001277!4.44e-07!9;UBERON:0004923!7.24e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.28e-18,31;UBERON:0001242,1.15e-15,13;UBERON:0001262,1.15e-15,13;UBERON:0004786,1.15e-15,13;UBERON:0000344,3.28e-15,15;UBERON:0003350,1.44e-13,9;UBERON:0004808,1.44e-13,9;UBERON:0001277,1.44e-13,9;UBERON:0000485,4.48e-13,11;UBERON:0005409,5.08e-13,47;UBERON:0004923,2.53e-09,24;UBERON:0001007,3.25e-07,116;UBERON:0001555,3.25e-07,116;UBERON:0007026,3.25e-07,116;UBERON:0004119,6.18e-07,118;UBERON:0000925,6.18e-07,118;UBERON:0006595,6.18e-07,118;UBERON:0004921,6.71e-07,114|phase1_expression=0.640595388419176,3.83872948403297,3.18499467572675,4.53696316960245,9.01612313903425,2.01455126294268,2.33612640595526,0,0,0,0,0,0,0,0.333109761815663,0.809901069559304,1.39912375625629,0,0.137114433605739,0.42438965179803,0.425216450755349,0,0,1.27993938234725,0.91763712426868,4.59385571292016,2.58457197695445,1.50829862880122,1.52018735565099,3.02436155711917,1.77384408524244,1.90509202037889,0,0,2.02196133825892,1.32987716286794,1.83752420636132,1.25559489221072,3.906676722619,0.523523743973798,1.76469446409304,4.09827290975067,1.45653105909346,0,0,0,0,0.872100625521786,0.219686182734472,0.194429899074283,0.699932108126813,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,1.3498495759221,0.988866362566974,0.7104801149461,0.299600110518405,0,0,0.135005938331691,0,0.571301968807607,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0.383062014255563,0.153606533256243,0.131886287730194,0.0914876436024097,0,0.837548997004143,0.56276261003168,0.61119299110724,0.294628585473668,0.569486723196412,0.372798891650601,0.151452386666368,0.68014404096107,1.73918693221007,3.44169550792555,0.679971333707751,1.07940638327563,0,0,0.702222100658759,0,0,0,1.54927761754349,0,0,0,1.29894624606728,0,1.51657333504435,1.02765491747154,0,0,0,0.608930956624282,0,0.301445281105245,0.23517741427141,0.251333182659351,0,0.86759614151947,1.76922110389975,0.647067399789637,0.883366073841574,0.969750506270444,0,0,0.209446706813455,1.27728527604296,0.718890747035522,0,1.14363204365758,0.898743836428936,1.37250180845588,0.628271760564322,0.347648640384553,0,0,0.648965052271031,0.203678727700633,0.746441823660558,0.252722758433675,1.05220927943237,0.390361328888111,0,0,0,0.204109497453984,0.384341160854549,0.374806898238915,0.258703370739016,0,0.567318240503458,0.175951124163949,0.219195732427575,0.278047249225598,0,0.61734640922383,0.199034266818493,0,0.772043721344145,0,0,0.234526059981096,0,0.473489471170421,0.787056926989615,0,0.930135779001631,0,0.700592054203017,0.658239399653922,0.985004784474571,1.29710095273369,1.16959989940266,1.3173006917463,1.61047702512446,0,0.102904612379284,0.991256348951394,0.793351699990633,0.213288250535234,0.928946687441754,0.38660238396628,1.00841762311671,1.11189021922435,1.14135375667535,2.84717436926707,0.823494773620054,0.502670417600539,1.1937388322469,2.14460495831032,0.898819408654221,3.02593269824572,2.19055400579804,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.126473074248515,0.738050739898011,0.470996183524124,0.123397163921801,1.77871576252289,0.166845105716094,1.17935397067922,0.224862112384854,1.01430060694251,0.482354319504834,0.25462585178142,0.287696137450811,0.648540907100142,0.549122826376163,2.87536413054709,0.372140947668503,0.936113019343682,0.505157755894224,0.538192240565737,0,0,0.189491411770485,0.488894929326078,0,0,0.167506257441816,0,0.390267295715598,0.157635144106191,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0.54390568381871,0.491764273019036,0.275936746304732,0.963303539926752,0.703270119553219,0,0.252470927204373,0.94652465824877,0.390438744296638,1.50796378412959,0.477937595905104,0.445597348164788,1.98153571552183,0.809621403349789,0.584511715822624,1.58115111178609,0,0,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0.377210159511796,0.295301892880773,0.307435147943927,0.775284879504663,0,0,0.316036757935816,0,0,0,0.720244376125241,0,0.214337035031592,0,0.535106452806212,0.493647061806363,0.608929898229199,0,0.42366414172764,0,1.15420377059036,0.807322133479528,1.08563264870681,1.3130957840345,0.492422699235184,2.91480836629851,0.370850604021019,0.512612642393558,0.206386867963223,0.185194527369712,1.13021074202815,0.956859594047176,0.686334519619568,0.679913719975421,0.139951452323658,0.552799895217695,0.954670618015114,0.474503990371703,0.609958401380546,0.108005340821801,0.627264888043406,1.31017538247707,0.674321731924103,0.578574190077352,0,1.68499465279331,0,0,0.299033092087958,0.496375471371293,0,0.516639293910924,0.506868376472335,0.352071715937262,0.2604087696879,0.104859344425711,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0,0,0.198681354781265,0.240390899039938,0.147689527174577,0,0.15241361331,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,1.81384306892169,0,0,0,0.965947970160952,0.750729901804728,1.09890974560359,1.50057865355346,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.31136204275253,0.399024873401031,0.512200817262403,0,0.419226325255965,0.551530525350042,0.888986911206461,0.824140228955577,0.320919209591815,0.252697211763798,0.25347929989024,0.754505365544305,0.561849044819294,0.640251524048693,0.287177344778066,0.476293691283074,1.0429589335037,0.38581844092741,0,0.735994600671987,0.342869252385415,0.70990322463735,0.238436189947321,0.436039249896986,0.470546902076653,0.507687647350059,1.09756783723664,0,0.543216455383447,0,0.355905054372522,0.689531376628944,0.818462086339379,1.08455788830176,0.578719832943424,0.499621155875892,0.233931608445408,0.429742108096597,0.382576664137687,0.882365676478062,1.15933917810211|short_description=p2@P2ry1}} | ||
|EntrezGene=18441 | |||
|HGNC= | |||
|MCL_coexpression_id=1500 | |||
|UniProt=P49650,Q544J5 | |||
|association_with_transcript=-11bp_to_ENSMUST00000029331,NM_008772,uc008pjj.1,uc008pjk.1_5end | |||
|description=CAGE_peak_2_at_P2ry1_5end | |||
|id=chr3:60806700..60806705,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.44e-07!9;CL:0002251!4.44e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.27e-13,25;CL:0002563,1.44e-13,9;CL:0002251,1.44e-13,9;CL:0000075,3.43e-11,7;CL:0002076,1.44e-10,15;CL:0000239,4.09e-10,6;CL:0000677,4.09e-10,6;CL:0000584,4.09e-10,6;CL:0000223,5.52e-10,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.16e-09!15;UBERON:0001242!4.73e-09!13;UBERON:0000060!4.73e-09!13;UBERON:0001262!4.73e-09!13;UBERON:0004786!4.73e-09!13;UBERON:0005409!5.59e-08!59;UBERON:0000485!1.71e-07!11;UBERON:0000160!4.39e-07!43;UBERON:0003350!4.44e-07!9;UBERON:0004808!4.44e-07!9;UBERON:0001277!4.44e-07!9;UBERON:0004923!7.24e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.28e-18,31;UBERON:0001242,1.15e-15,13;UBERON:0001262,1.15e-15,13;UBERON:0004786,1.15e-15,13;UBERON:0000344,3.28e-15,15;UBERON:0003350,1.44e-13,9;UBERON:0004808,1.44e-13,9;UBERON:0001277,1.44e-13,9;UBERON:0000485,4.48e-13,11;UBERON:0005409,5.08e-13,47;UBERON:0004923,2.53e-09,24;UBERON:0001007,3.25e-07,116;UBERON:0001555,3.25e-07,116;UBERON:0007026,3.25e-07,116;UBERON:0004119,6.18e-07,118;UBERON:0000925,6.18e-07,118;UBERON:0006595,6.18e-07,118;UBERON:0004921,6.71e-07,114 | |||
|phase1_expression=0.640595388419176,3.83872948403297,3.18499467572675,4.53696316960245,9.01612313903425,2.01455126294268,2.33612640595526,0,0,0,0,0,0,0,0.333109761815663,0.809901069559304,1.39912375625629,0,0.137114433605739,0.42438965179803,0.425216450755349,0,0,1.27993938234725,0.91763712426868,4.59385571292016,2.58457197695445,1.50829862880122,1.52018735565099,3.02436155711917,1.77384408524244,1.90509202037889,0,0,2.02196133825892,1.32987716286794,1.83752420636132,1.25559489221072,3.906676722619,0.523523743973798,1.76469446409304,4.09827290975067,1.45653105909346,0,0,0,0,0.872100625521786,0.219686182734472,0.194429899074283,0.699932108126813,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,1.3498495759221,0.988866362566974,0.7104801149461,0.299600110518405,0,0,0.135005938331691,0,0.571301968807607,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0.383062014255563,0.153606533256243,0.131886287730194,0.0914876436024097,0,0.837548997004143,0.56276261003168,0.61119299110724,0.294628585473668,0.569486723196412,0.372798891650601,0.151452386666368,0.68014404096107,1.73918693221007,3.44169550792555,0.679971333707751,1.07940638327563,0,0,0.702222100658759,0,0,0,1.54927761754349,0,0,0,1.29894624606728,0,1.51657333504435,1.02765491747154,0,0,0,0.608930956624282,0,0.301445281105245,0.23517741427141,0.251333182659351,0,0.86759614151947,1.76922110389975,0.647067399789637,0.883366073841574,0.969750506270444,0,0,0.209446706813455,1.27728527604296,0.718890747035522,0,1.14363204365758,0.898743836428936,1.37250180845588,0.628271760564322,0.347648640384553,0,0,0.648965052271031,0.203678727700633,0.746441823660558,0.252722758433675,1.05220927943237,0.390361328888111,0,0,0,0.204109497453984,0.384341160854549,0.374806898238915,0.258703370739016,0,0.567318240503458,0.175951124163949,0.219195732427575,0.278047249225598,0,0.61734640922383,0.199034266818493,0,0.772043721344145,0,0,0.234526059981096,0,0.473489471170421,0.787056926989615,0,0.930135779001631,0,0.700592054203017,0.658239399653922,0.985004784474571,1.29710095273369,1.16959989940266,1.3173006917463,1.61047702512446,0,0.102904612379284,0.991256348951394,0.793351699990633,0.213288250535234,0.928946687441754,0.38660238396628,1.00841762311671,1.11189021922435,1.14135375667535,2.84717436926707,0.823494773620054,0.502670417600539,1.1937388322469,2.14460495831032,0.898819408654221,3.02593269824572,2.19055400579804,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.126473074248515,0.738050739898011,0.470996183524124,0.123397163921801,1.77871576252289,0.166845105716094,1.17935397067922,0.224862112384854,1.01430060694251,0.482354319504834,0.25462585178142,0.287696137450811,0.648540907100142,0.549122826376163,2.87536413054709,0.372140947668503,0.936113019343682,0.505157755894224,0.538192240565737,0,0,0.189491411770485,0.488894929326078,0,0,0.167506257441816,0,0.390267295715598,0.157635144106191,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0.54390568381871,0.491764273019036,0.275936746304732,0.963303539926752,0.703270119553219,0,0.252470927204373,0.94652465824877,0.390438744296638,1.50796378412959,0.477937595905104,0.445597348164788,1.98153571552183,0.809621403349789,0.584511715822624,1.58115111178609,0,0,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0.377210159511796,0.295301892880773,0.307435147943927,0.775284879504663,0,0,0.316036757935816,0,0,0,0.720244376125241,0,0.214337035031592,0,0.535106452806212,0.493647061806363,0.608929898229199,0,0.42366414172764,0,1.15420377059036,0.807322133479528,1.08563264870681,1.3130957840345,0.492422699235184,2.91480836629851,0.370850604021019,0.512612642393558,0.206386867963223,0.185194527369712,1.13021074202815,0.956859594047176,0.686334519619568,0.679913719975421,0.139951452323658,0.552799895217695,0.954670618015114,0.474503990371703,0.609958401380546,0.108005340821801,0.627264888043406,1.31017538247707,0.674321731924103,0.578574190077352,0,1.68499465279331,0,0,0.299033092087958,0.496375471371293,0,0.516639293910924,0.506868376472335,0.352071715937262,0.2604087696879,0.104859344425711,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0,0,0.198681354781265,0.240390899039938,0.147689527174577,0,0.15241361331,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,1.81384306892169,0,0,0,0.965947970160952,0.750729901804728,1.09890974560359,1.50057865355346,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.31136204275253,0.399024873401031,0.512200817262403,0,0.419226325255965,0.551530525350042,0.888986911206461,0.824140228955577,0.320919209591815,0.252697211763798,0.25347929989024,0.754505365544305,0.561849044819294,0.640251524048693,0.287177344778066,0.476293691283074,1.0429589335037,0.38581844092741,0,0.735994600671987,0.342869252385415,0.70990322463735,0.238436189947321,0.436039249896986,0.470546902076653,0.507687647350059,1.09756783723664,0,0.543216455383447,0,0.355905054372522,0.689531376628944,0.818462086339379,1.08455788830176,0.578719832943424,0.499621155875892,0.233931608445408,0.429742108096597,0.382576664137687,0.882365676478062,1.15933917810211 | |||
|short_description=p2@P2ry1 | |||
}} |
Revision as of 02:24, 14 September 2013
Short description: | p2@P2ry1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_P2ry1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1500 |
Association with transcript: | -11bp_to_ENSMUST00000029331, NM_008772, uc008pjj.1, uc008pjk.1_5end |
EntrezGene: | P2ry1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.27e-13 | 25 |
intestinal epithelial cell | 1.44e-13 | 9 |
epithelial cell of alimentary canal | 1.44e-13 | 9 |
columnar/cuboidal epithelial cell | 3.43e-11 | 7 |
endo-epithelial cell | 1.44e-10 | 15 |
brush border epithelial cell | 4.09e-10 | 6 |
gut absorptive cell | 4.09e-10 | 6 |
enterocyte | 4.09e-10 | 6 |
endodermal cell | 5.52e-10 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.28e-18 | 31 |
intestinal mucosa | 1.15e-15 | 13 |
wall of intestine | 1.15e-15 | 13 |
gastrointestinal system mucosa | 1.15e-15 | 13 |
mucosa | 3.28e-15 | 15 |
epithelium of mucosa | 1.44e-13 | 9 |
gastrointestinal system epithelium | 1.44e-13 | 9 |
intestinal epithelium | 1.44e-13 | 9 |
simple columnar epithelium | 4.48e-13 | 11 |
gastrointestinal system | 5.08e-13 | 47 |
organ component layer | 2.53e-09 | 24 |
digestive system | 3.25e-07 | 116 |
digestive tract | 3.25e-07 | 116 |
primitive gut | 3.25e-07 | 116 |
endoderm-derived structure | 6.18e-07 | 118 |
endoderm | 6.18e-07 | 118 |
presumptive endoderm | 6.18e-07 | 118 |
subdivision of digestive tract | 6.71e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.