FFCP PHASE1:Mm9::chr4:101390467..101390478,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16847|HGNC=|UniProt=P48356,Q3US58,Q640Q2,Q3UNU8,A2AV69|association_with_transcript=455bp_to_NM_001122899,NM_010704,NM_146146,uc008tvw.2,uc008tvx.2,uc008tvy.2,uc008tvz.2_5end|description=CAGE_peak_4_at_Lepr_5end|id=chr4:101390467..101390478,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.12e-08,14;UBERON:0000117,3.12e-08,14;UBERON:0000171,3.12e-08,14;UBERON:0000170,3.12e-08,14;UBERON:0005597,3.12e-08,14;UBERON:0000118,3.12e-08,14|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0.142371680799103,0.186399445825301,0,0,0.289864488701678,0.860423876981386,0,0,0,0.896053774194671,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.68510327831436,3.88406825470758,0,0,0.304465478312141,0,0,0.352766121407114,0.376999773989026,0.494389935468748,0.144599356919912,0.884610551949874,0.161766849947409,0.441683036920787,1.45462575940567,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0.20778804455956,0,0.81471491080253,1.49288364732112,0,0,0.520481771850815,0.229902104433473,0.720248519221397,0,0.476255494059295,0.2562274405697,0.187403449119458,0.258703370739016,0,0,0.175951124163949,0.657587197282725,1.11218899690239,1.74126083261083,2.67516777330327,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0.467061369468678,0.822799249567402,0.656669856316381,0.405344047729279,0.146199987425332,0.219550115291051,0.268412837520744,0,0.823236899034275,0,0,0,0,0.128867461322093,0,0.444756087689741,0.951128130562796,0.474529061544512,1.4822905925161,0.502670417600539,0.596869416123452,0.38992817423824,0.898819408654221,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,0,0.610953983535943,0.969762435838129,1.19230893813542,1.51767689098217,0.442830443938806,1.09899109488962,1.1105744752962,0.592905254174298,0,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0,2.2698931748505,1.37280706594041,0,4.46569137202204,1.24815069245824,1.01031551178845,0.538192240565737,0,2.21703828199926,0,0.651859905768103,0,0.234690248288502,0,0.714130922658041,0.975668239288994,3.15270288212382,2.21464689648775,2.07291199254733,4.58817281204066,2.07221978239075,2.89298117163023,0,0,0,0.275936746304732,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,1.56134093729095,0.534196811001766,0.651547837414304,0.989820737835213,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,1.05418608574999,0,0,0.18006109403131,0,0.214337035031592,1.06404140185364,0.891844088010353,0.493647061806363,0.304464949114599,1.64270195644597,2.96564899209348,0.441056796109924,0.32977250588296,4.19807509409354,1.5078231232039,0.954978752025092,0.492422699235184,0.874442509889552,0.18542530201051,0.341741761595705,0,0.740778109478847,0.188368457004691,0.410082683163076,0.457556346413045,0,0,0,0.954670618015114,0.316335993581135,0.203319467126849,0.648032044930808,1.04544148007234,0.218362563746178,0.674321731924103,1.40510874733071,0.26175594198403,1.29614973291793,0.621339313086926,0,0.149516546043979,0.330916980914195,1.16670713006429,0.774958940866387,2.36538575687089,1.87771581833206,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.772758376128762,0.750729901804728,0.73260649706906,0,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0,0,0.888986911206461,0.412070114477788,0.64183841918363,0.505394423527595,0.25347929989024,0.754505365544305,0.280924522409647,0.448176066834085,0.689225627467359,0,0.231768651889711,0.578727661391115,0.412085900803307,0.588795680537589,0,0.887379030796687,0.476872379894642,0.145346416632329,0.470546902076653,0.930760686808441,0.365855945745545,0.526139422875686,0.543216455383447,0.561142271657738,0.711810108745045,0.492522411877817,0.409231043169689,0.464810523557898,0.771626443924566,0.249810577937946,1.40358965067245,1.71896843238639,0.956441660344217,0.441182838239031,1.15933917810211|short_description=p4@Lepr}} | ||
|EntrezGene=16847 | |||
|HGNC= | |||
|UniProt=P48356,Q3US58,Q640Q2,Q3UNU8,A2AV69 | |||
|association_with_transcript=455bp_to_NM_001122899,NM_010704,NM_146146,uc008tvw.2,uc008tvx.2,uc008tvy.2,uc008tvz.2_5end | |||
|description=CAGE_peak_4_at_Lepr_5end | |||
|id=chr4:101390467..101390478,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.12e-08,14;UBERON:0000117,3.12e-08,14;UBERON:0000171,3.12e-08,14;UBERON:0000170,3.12e-08,14;UBERON:0005597,3.12e-08,14;UBERON:0000118,3.12e-08,14 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0.142371680799103,0.186399445825301,0,0,0.289864488701678,0.860423876981386,0,0,0,0.896053774194671,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.68510327831436,3.88406825470758,0,0,0.304465478312141,0,0,0.352766121407114,0.376999773989026,0.494389935468748,0.144599356919912,0.884610551949874,0.161766849947409,0.441683036920787,1.45462575940567,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0.20778804455956,0,0.81471491080253,1.49288364732112,0,0,0.520481771850815,0.229902104433473,0.720248519221397,0,0.476255494059295,0.2562274405697,0.187403449119458,0.258703370739016,0,0,0.175951124163949,0.657587197282725,1.11218899690239,1.74126083261083,2.67516777330327,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0.467061369468678,0.822799249567402,0.656669856316381,0.405344047729279,0.146199987425332,0.219550115291051,0.268412837520744,0,0.823236899034275,0,0,0,0,0.128867461322093,0,0.444756087689741,0.951128130562796,0.474529061544512,1.4822905925161,0.502670417600539,0.596869416123452,0.38992817423824,0.898819408654221,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,0,0.610953983535943,0.969762435838129,1.19230893813542,1.51767689098217,0.442830443938806,1.09899109488962,1.1105744752962,0.592905254174298,0,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0,2.2698931748505,1.37280706594041,0,4.46569137202204,1.24815069245824,1.01031551178845,0.538192240565737,0,2.21703828199926,0,0.651859905768103,0,0.234690248288502,0,0.714130922658041,0.975668239288994,3.15270288212382,2.21464689648775,2.07291199254733,4.58817281204066,2.07221978239075,2.89298117163023,0,0,0,0.275936746304732,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,1.56134093729095,0.534196811001766,0.651547837414304,0.989820737835213,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,1.05418608574999,0,0,0.18006109403131,0,0.214337035031592,1.06404140185364,0.891844088010353,0.493647061806363,0.304464949114599,1.64270195644597,2.96564899209348,0.441056796109924,0.32977250588296,4.19807509409354,1.5078231232039,0.954978752025092,0.492422699235184,0.874442509889552,0.18542530201051,0.341741761595705,0,0.740778109478847,0.188368457004691,0.410082683163076,0.457556346413045,0,0,0,0.954670618015114,0.316335993581135,0.203319467126849,0.648032044930808,1.04544148007234,0.218362563746178,0.674321731924103,1.40510874733071,0.26175594198403,1.29614973291793,0.621339313086926,0,0.149516546043979,0.330916980914195,1.16670713006429,0.774958940866387,2.36538575687089,1.87771581833206,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.772758376128762,0.750729901804728,0.73260649706906,0,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0,0,0.888986911206461,0.412070114477788,0.64183841918363,0.505394423527595,0.25347929989024,0.754505365544305,0.280924522409647,0.448176066834085,0.689225627467359,0,0.231768651889711,0.578727661391115,0.412085900803307,0.588795680537589,0,0.887379030796687,0.476872379894642,0.145346416632329,0.470546902076653,0.930760686808441,0.365855945745545,0.526139422875686,0.543216455383447,0.561142271657738,0.711810108745045,0.492522411877817,0.409231043169689,0.464810523557898,0.771626443924566,0.249810577937946,1.40358965067245,1.71896843238639,0.956441660344217,0.441182838239031,1.15933917810211 | |||
|short_description=p4@Lepr | |||
}} |
Revision as of 03:15, 14 September 2013
Short description: | p4@Lepr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Lepr_5end |
Coexpression cluster: | NA |
Association with transcript: | 455bp_to_NM_001122899, NM_010704, NM_146146, uc008tvw.2, uc008tvx.2, uc008tvy.2, uc008tvz.2_5end |
EntrezGene: | Lepr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 3.12e-08 | 14 |
respiratory tube | 3.12e-08 | 14 |
respiration organ | 3.12e-08 | 14 |
pair of lungs | 3.12e-08 | 14 |
lung primordium | 3.12e-08 | 14 |
lung bud | 3.12e-08 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.