FFCP PHASE1:Hg19::chr8:38243951..38243964,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=137994|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14648|TSSclassifier=S|UniProt=Q2VYF4|association_with_transcript=0bp_to_ENST00000297720,NM_001199659,NM_144652_5end|description=CAGE_peak_8_at_LETM2_5end|id=chr8:38243951..38243964,+|ontology_enrichment_celltype=CL:0000037!1.79e-10!172;CL:0000566!1.79e-10!172;CL:0002032!2.17e-10!165;CL:0000837!2.17e-10!165;CL:0002031!6.26e-10!124;CL:0000988!1.31e-09!182;CL:0000738!8.38e-09!140;CL:0000838!2.01e-08!52;CL:0000542!4.95e-08!53;CL:0000051!4.95e-08!53|ontology_enrichment_celltype_v019=CL:0002032;2.07e-12;1!CL:0000557;2.07e-12;1|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.71e-07!115|ontology_enrichment_uberon_v019=UBERON:0001874;2.07e-12;1!UBERON:0007195;2.07e-12;1!UBERON:0001905;7.82e-07;2!UBERON:0001954;7.82e-07;2!UBERON:0002757;7.82e-07;2!UBERON:0010134;7.82e-07;2!UBERON:0003022;7.82e-07;2!UBERON:0005408;7.82e-07;2!UBERON:0002421;7.82e-07;2!UBERON:0001899;7.82e-07;2!UBERON:0002600;7.82e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001874,2.75e-12,1;UBERON:0007195,3.45e-12,1;UBERON:0001954,6.07e-07,2;UBERON:0003022,6.07e-07,2;UBERON:0002421,6.07e-07,2;UBERON:0002600,6.07e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.305653622991805,0.738905305049512,0.787107813136792,0,0,0.154816123316076,0,0,0.369754010166788,0.154934401160603,0.284338464974843,0,0,0,0.434021741431704,0.447830948479849,0,0.257575567634187,0.436194716338694,0.377875943688809,0.485168122375632,0.464858073811369,0.411167888021826,0,0.28769239232215,0,0.47296445977717,0.344745680736619,0,0,0.376484679085209,0,0.449446968890169,0.306083892370903,0.320929027076094,0.639337125799041,0,0.199463657621632,1.27867425159808,0,0,0,0.251248665256743,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0.182664153764634,1.75996244461323,0.546138611262131,0,0.426730222566507,0,0,0.661044872784862,0.954053754535364,0.569212969109448,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0.334372990781356,0.651844533267181,0,0,0.891283655081389,0,0.443067789167242,0.270803863765016,0.896639238079726,0.650296737799391,0,0.276350017785848,0.289803085735052,0,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0.821127996921047,0.403213486449465,0.267440195783507,0.144824403882799,0,0,0,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0.189069634328136,0,0,0.589405839739707,0.364295288292542,0,0,0,0.132957960518865,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0.450445921933289,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.404132016209064,0.163461903113459,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0.309977343527296,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0.504867548488229,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0.236613600079688,0,0,0.220587945464788,0.217879444092406,0,0,0.392442930250692,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0.301586917234893,0.277765335475589,0,0,1.44331342025273,0.34779121492523,0.117408694235822,0.144366447761074,0,0,0.790204397959275,0,0.246217006087397,0.468008530278475,0,0,0.16798212819886,0,0.179117045405697,0.290633938513962,0,0.985326475791887,0.264145302039678,0.621984346622316,0.576479813667846,1.00993946741104,0.126995788584338,0.763976851116555,0,1.71072446022705,0,0.300343057843917,0.285826432630578,0,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0.896681151948218,0.394061520403854,0,0.641715181398742,0,0,0,0,0,0,2.99161459204025,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0.184161977871793,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,1.46139224653261,0,1.13733384070897,0,0.215915916102139,0,0,0,0.509752546090077,0.831076008928724,0,0.219259876645935,0.261435451024901,0.512900250232778,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0,0,0,0.0890320356467374,0.165284915360978,0.192190067365106,0.382838137483752,0,0,0.31481234683064,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.196498082026242,0,0,0,0,0,0.349934720244983,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,0,0,1.29694662238543,0,0.79312517629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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=137994 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14648 | |||
|TSSclassifier=S | |||
|UniProt=Q2VYF4 | |||
|association_with_transcript=0bp_to_ENST00000297720,NM_001199659,NM_144652_5end | |||
|description=CAGE_peak_8_at_LETM2_5end | |||
|id=chr8:38243951..38243964,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.79e-10!172;CL:0000566!1.79e-10!172;CL:0002032!2.17e-10!165;CL:0000837!2.17e-10!165;CL:0002031!6.26e-10!124;CL:0000988!1.31e-09!182;CL:0000738!8.38e-09!140;CL:0000838!2.01e-08!52;CL:0000542!4.95e-08!53;CL:0000051!4.95e-08!53 | |||
|ontology_enrichment_celltype_v019=CL:0002032;2.07e-12;1!CL:0000557;2.07e-12;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.71e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001874;2.07e-12;1!UBERON:0007195;2.07e-12;1!UBERON:0001905;7.82e-07;2!UBERON:0001954;7.82e-07;2!UBERON:0002757;7.82e-07;2!UBERON:0010134;7.82e-07;2!UBERON:0003022;7.82e-07;2!UBERON:0005408;7.82e-07;2!UBERON:0002421;7.82e-07;2!UBERON:0001899;7.82e-07;2!UBERON:0002600;7.82e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,2.75e-12,1;UBERON:0007195,3.45e-12,1;UBERON:0001954,6.07e-07,2;UBERON:0003022,6.07e-07,2;UBERON:0002421,6.07e-07,2;UBERON:0002600,6.07e-07,2 | |||
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| |||
|short_description=p8@LETM2 | |||
}} |
Revision as of 05:12, 14 September 2013
Short description: | p8@LETM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_LETM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000297720, NM_001199659, NM_144652_5end |
EntrezGene: | LETM2 |
HGNC: | 14648 |
UniProt: | Q2VYF4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
putamen | 2.75e-12 | 1 |
stroma of bone marrow | 3.45e-12 | 1 |
Ammon's horn | 6.07e-07 | 2 |
lobe parts of cerebral cortex | 6.07e-07 | 2 |
hippocampal formation | 6.07e-07 | 2 |
limbic lobe | 6.07e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.