FFCP PHASE1:Mm9::chr4:57254065..57254072,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=189|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:57254065..57254072,-|id=chr4:57254065..57254072,-|ontology_enrichment_celltype=CL:0002610!6.98e-10!3|ontology_enrichment_celltype_v019_2=CL:0002610,1.65e-52,3;CL:0000117,1.31e-07,23;CL:0000337,1.31e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004684!6.98e-10!3;UBERON:0002275!6.98e-10!3|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.65e-52,3;UBERON:0002275,1.65e-52,3;UBERON:0000073,1.10e-08,54;UBERON:0001894,5.53e-08,10;UBERON:0006222,5.53e-08,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20231761998777,2.93680877595932,1.38245879930619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0778804455956,2.43361894601636,0,0,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.292399974850665,0,0.134206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0.220591419119515,0.463735671240843|short_description=p@chr4:57254065..57254072,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=189 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:57254065..57254072,- | |||
|id=chr4:57254065..57254072,- | |||
|ontology_enrichment_celltype=CL:0002610!6.98e-10!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.65e-52,3;CL:0000117,1.31e-07,23;CL:0000337,1.31e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004684!6.98e-10!3;UBERON:0002275!6.98e-10!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.65e-52,3;UBERON:0002275,1.65e-52,3;UBERON:0000073,1.10e-08,54;UBERON:0001894,5.53e-08,10;UBERON:0006222,5.53e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20231761998777,2.93680877595932,1.38245879930619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0778804455956,2.43361894601636,0,0,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.292399974850665,0,0.134206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p@chr4:57254065..57254072,- | |||
}} |
Revision as of 05:15, 14 September 2013
Short description: | p@chr4:57254065..57254072, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:57254065..57254072, - |
Coexpression cluster: | MCL_coexpression_mm9:189 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.65e-52 | 3 |
CNS neuron (sensu Vertebrata) | 1.31e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.31e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.65e-52 | 3 |
reticular formation | 1.65e-52 | 3 |
regional part of nervous system | 1.10e-08 | 54 |
diencephalon | 5.53e-08 | 10 |
future diencephalon | 5.53e-08 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.