FFCP PHASE1:Hg19::chr8:72756251..72756262,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9242|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7321|TSSclassifier=W|UniProt=O60682|association_with_transcript=136bp_to_AF087036_5end|description=CAGE_peak_12_at_MSC_5end|id=chr8:72756251..72756262,-|ontology_enrichment_celltype=CL:0000048!4.74e-13!430;CL:0000723!1.76e-12!436;CL:0000034!7.01e-12!444;CL:0000219!2.30e-11!390;CL:0000134!4.49e-11!358;CL:0002320!2.17e-10!365;CL:0000055!8.02e-10!180;CL:0000057!1.33e-09!75|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000219,1.10e-10,386;CL:0000134,1.51e-09,354;CL:0002320,3.58e-09,361|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!9.85e-07!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!3.28e-11!375|ontology_enrichment_uberon_v019=UBERON:0004457;1.48e-09;9!UBERON:0000042;1.48e-09;9!UBERON:0003688;1.49e-09;6!UBERON:0002358;1.49e-09;6!UBERON:0003684;1.49e-09;6!UBERON:0001178;1.49e-09;6|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.14e-09,6;UBERON:0002358,1.14e-09,6;UBERON:0003684,1.14e-09,6;UBERON:0001178,1.14e-09,6;UBERON:0002384,2.27e-09,371;UBERON:0004457,3.86e-07,12;UBERON:0000042,3.86e-07,12|phase1_expression=0.726713517082227,1.2846031433459,0.704772020479856,1.0007329835313,1.78784437770915,0,0,1.26343974685366,0.261185628199839,0,0,0,0,0,0,0,0.602694528023977,0,0.975865597581014,0,0,0.313454721478088,0,0,0,0.458480434487708,0.57470412614962,0.472264687882075,0,0,0,0,0,0,0,0,0,1.10799081706375,0.802177789880567,0.217010870715852,0,0.647787332037959,0,0,0.377875943688809,0.242584061187816,0.464858073811369,1.6446715520873,0.309706370895104,0,0,0.709446689665756,0.344745680736619,0,0,0.376484679085209,0.818718450173537,1.34834090667051,0.306083892370903,0,0,0,0,0.426224750532694,1.16083695451434,2.26954089876456,0.622822248995575,0.251248665256743,1.0429658368404,0.868755378820466,0,1.10483290796269,2.21523671208619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24203425192614,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0.201606743224732,0,0,0,0,0.639312809217652,0,0.50133791063589,0.289693037921647,0.795285947051099,0.486634870302636,0,0,0.263504357079378,0,0,0.370784442784429,0,0.870648686496336,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.886413581652058,0.529636723252875,0.573673241497627,0.709336764396714,1.12135520028461,2.1349799145941,1.97334038733728,0,0.942974704487816,0.163461903113459,0.151357427644931,1.15235184896,2.57753575017176,0.936480230490962,0.570471821544449,0.298897361103602,0,0,0,0,0.122834317311768,0.826606249406124,2.37600571456411,0.741800787835671,0,0.718618141816238,0.168336113954066,0,0.554128230968366,0.438977620880838,0,3.15499923703853,0.113432183160021,0,0.427114777637135,0.635795703478686,0,0.206105058476878,0,0.37223371266318,0,0.389748020644795,0,0.644349290496095,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,2.80805118167085,0.594524649154913,0,0,0,0,0,0,0,0.088048434013226,0,0,0,1.0159663086747,0.381988425558278,0,0,0.308482478109971,0,0.571652865261156,0,0.87192013766656,0.07333828582095,1.29271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,1.20575750823834,1.74306691720059,0.899756920638513,0,0,0,1.91699884393266,0,0,0,0,0.179060963239896,0.784596007954691,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.356857977594324,0.473107245101804,0,0,2.27407504055985,0,0.664225598535437,0.184369168541703,0.173767228936166,0.195801157462741,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,1.24053903909388,0.61384789315225,0.561320188866147,1.79394808957981,0,1.28683136914886,0,0.154209693802656,0.710246901252508,0.328508624055237,0.519254429183621,0.581051892299796,0,0,0,0.34444334449382,0.182091168006717,1.04899531967539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0,0.574265537996172,0,1.6068392984416,0.290012154876366,0.154048617114644,0.15350367472613,0.275673144969061,0,0.290033387828457,0.170453254832202,0.356128142586949,0,0,0,0,0,0.62962469366128,0.6970372701606,0,0.532306030317022,0,0.37064843820784,0.572499546967965,0,0,0,0,0,0.636406495851874,0,0.179872457583315,0.54907405947211,0.471249609382746,0.606547444719948,0,0.842516912477962,0,0.731140468893853,0,0.136499911407986,0.424216295861138,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0.563391205064483,0,0,0.7133421029625,0,1.26664581178598,0.987884678879706,0.379473173765715,0.349934720244983,0,0.670302275535787,0,0.282431402330337,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0.447352215784832,0.333698283423817,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9242 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7321 | |||
|TSSclassifier=W | |||
|UniProt=O60682 | |||
|association_with_transcript=136bp_to_AF087036_5end | |||
|description=CAGE_peak_12_at_MSC_5end | |||
|id=chr8:72756251..72756262,- | |||
|ontology_enrichment_celltype=CL:0000048!4.74e-13!430;CL:0000723!1.76e-12!436;CL:0000034!7.01e-12!444;CL:0000219!2.30e-11!390;CL:0000134!4.49e-11!358;CL:0002320!2.17e-10!365;CL:0000055!8.02e-10!180;CL:0000057!1.33e-09!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,1.10e-10,386;CL:0000134,1.51e-09,354;CL:0002320,3.58e-09,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!9.85e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.28e-11!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.48e-09;9!UBERON:0000042;1.48e-09;9!UBERON:0003688;1.49e-09;6!UBERON:0002358;1.49e-09;6!UBERON:0003684;1.49e-09;6!UBERON:0001178;1.49e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.14e-09,6;UBERON:0002358,1.14e-09,6;UBERON:0003684,1.14e-09,6;UBERON:0001178,1.14e-09,6;UBERON:0002384,2.27e-09,371;UBERON:0004457,3.86e-07,12;UBERON:0000042,3.86e-07,12 | |||
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| |||
|short_description=p12@MSC | |||
}} |
Revision as of 06:00, 14 September 2013
Short description: | p12@MSC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_MSC_5end |
Coexpression cluster: | NA |
Association with transcript: | 136bp_to_AF087036_5end |
EntrezGene: | MSC |
HGNC: | 7321 |
UniProt: | O60682 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 1.10e-10 | 386 |
mesenchymal cell | 1.51e-09 | 354 |
connective tissue cell | 3.58e-09 | 361 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.14e-09 | 6 |
peritoneum | 1.14e-09 | 6 |
abdominal cavity | 1.14e-09 | 6 |
visceral peritoneum | 1.14e-09 | 6 |
connective tissue | 2.27e-09 | 371 |
cavity lining | 3.86e-07 | 12 |
serous membrane | 3.86e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.