FFCP PHASE1:Hg19::chr8:82754792..82754820,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64089|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14980|TSSclassifier=W|UniProt=P57768|association_with_transcript=-253bp_to_ENST00000345957_5end|description=CAGE_peak_3_at_SNX16_5end|id=chr8:82754792..82754820,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001443;1.11e-07;11!UBERON:0000310;4.93e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0001443,1.43e-07,11;UBERON:0009569,4.46e-07,112;UBERON:0000310,5.93e-07,10|phase1_expression=6.54042165374004,2.78330681058278,6.76581139660662,1.0007329835313,2.68176656656373,1.74467704820074,0,0,0,0.245733936501509,11.1648186875588,0,1.31883489114227,0,0,0.672325146451775,0.602694528023977,0,0,0.123121058076788,4.48801520737357,1.88072832886853,2.57612388417951,3.14811177667634,0.87879847716362,1.45185470921107,1.39571002064908,0.944529375764151,2.75354993794233,0,3.09632246632152,2.75826367343678,4.51808878167375,1.47901604066715,1.54934401160603,0.710846162437108,0.880801318004542,7.75593571944628,0.601633342410425,1.08505435357926,0.223915474239924,0,0,0,0,0,0.697287110717054,0.411167888021826,0,0.575384784644301,0.256160706529101,0.236482229888585,0,0,0,0,0,0,1.22433556948361,0.320929027076094,1.27867425159808,0,0,0.426224750532694,0.580418477257168,0.56738522469114,1.24564449799115,0.502497330513487,1.0429658368404,0,7.87019353423379,0,0.949387162322653,0,1.91343869968539,1.67726916406701,0.336985893439485,1.65194582125657,3.05378614724452,0,1.39241674039363,2.00930569141097,0,0,0,0,0,0,0,0,1.70763890732835,1.17447437874188,0.382273228125229,2.64342657158052,0.560508562981536,2.10707267820062,1.37696839079683,1.17903228824749,0.822405995998037,0.167186495390678,0,1.89379122293893,1.94826728407911,0.779873198196215,0.589211814949674,0.664601683750863,0.541607727530031,2.68991771423918,2.86130564631732,2.13769275984779,2.48715016007264,0.579606171470105,0.741432815810302,1.60524496853828,0,0.453237370790265,0.383220493601921,0.68725489096526,2.78321661221453,0,0.651083453856419,0,0,0.383959833463255,0,0,0,1.00803371612366,0.802320587350522,0.724122019413995,19.5045493051169,0,0.767175371061182,3.61439152384566,0,0.289693037921647,0,0.486634870302636,2.07976597760949,1.10864698731282,0.351339142772504,3.20898734969396,0.364295288292542,1.85392221392215,0.324547393654683,0.174129737299267,0,1.90792499444274,2.85997455390064,0.371457501329565,0.79504962946682,0,0,0,0,1.92582629358047,1.25396979922086,5.16833518338658,2.84613010149368,0.66944122552934,0.805658634218294,3.80136052859256,1.95249646038536,2.20597848207521,0,2.23249320710199,1.57170560838319,1.12611480483322,0,0,1.09921046358244,0,0,1.3082821564276,2.48485975847659,0.379891534993739,1.32409180813219,2.58152958673932,1.41867352879343,1.12135520028461,0,0,0,1.0776853765575,0.653847612453835,0.302714855289863,0,0,0,0,0.747243402759005,2.58355897016283,2.5899671098901,1.12360645361799,1.63323337003915,0.61417158655884,0.206651562351531,1.18800285728205,0.247266929278557,0.910161361938026,0.718618141816238,2.18836948140286,0.375355559615893,0,0,0,0.150238058906597,2.83580457900053,1.97328599257748,1.70845911054854,0,2.40072876867522,0.206105058476878,0.257640540045629,0.18611685633159,3.20675031258406,0.389748020644795,0.252433774244115,0.0920498986422993,0,0,0.201504196455281,0.508681776931463,1.15956511897978,0.272746120590835,0,2.92736894711029,1.98794652482228,2.67246068599892,1.7622379352613,4.03713361401005,1.09493207722749,0,0,0,0,0.721879481669586,1.65629520055781,0.505754070234305,0.482022059766964,0.55146986366197,0.653638332277218,0.71181185733329,0.539325232640658,0.588664395376038,0.38474715694639,0,2.80483547606892,0,0,2.53510069643662,1.96565443335525,2.36315962672562,1.7658523976586,0.491953754172454,1.02940686179115,3.51200913307602,0,1.3068766413512,0,0,1.03993478527958,1.44331342025273,0.695582429850461,2.58299127318808,0,1.38895653772983,0.570762456703795,5.53143078571493,5.15091697256924,0,0,0,0,0,0.141775097242386,0.447792613514241,0.290633938513962,0.383382679165211,5.41929561685538,1.84901711427775,2.28060927094849,0.864719720501769,3.53478813593864,0.761974731506028,1.14596527667483,1.17217447210047,1.71072446022705,1.54241239054985,1.8020583470635,3.14409075893636,0,1.30788020649984,0.22001485746285,2.06834745212444,0,0.845302752556,0.531876233169741,0,1.02882949704857,1.41849132023278,1.5985330740966,4.57529579706072,3.25572963234866,0,1.30294473717494,0.710783897485092,0.791951872933429,1.80863626235752,0.871533458600294,1.69954085009497,3.64871341923571,0.502257091432126,4.21667878966063,0.239624855491583,0,2.85273810081437,1.44781306667579,1.02738161275192,2.32779252211864,0.896681151948218,1.18218456121156,1.2937654491571,0.77005821767849,3.30323011489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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64089 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14980 | |||
|TSSclassifier=W | |||
|UniProt=P57768 | |||
|association_with_transcript=-253bp_to_ENST00000345957_5end | |||
|description=CAGE_peak_3_at_SNX16_5end | |||
|id=chr8:82754792..82754820,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001443;1.11e-07;11!UBERON:0000310;4.93e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001443,1.43e-07,11;UBERON:0009569,4.46e-07,112;UBERON:0000310,5.93e-07,10 | |||
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| |||
|short_description=p3@SNX16 | |||
}} |
Revision as of 06:11, 14 September 2013
Short description: | p3@SNX16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SNX16_5end |
Coexpression cluster: | NA |
Association with transcript: | -253bp_to_ENST00000345957_5end |
EntrezGene: | SNX16 |
HGNC: | 14980 |
UniProt: | P57768 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chest | 1.43e-07 | 11 |
subdivision of trunk | 4.46e-07 | 112 |
breast | 5.93e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.