FFCP PHASE1:Mm9::chr5:90947967..90947982,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=280662|HGNC=|MCL_coexpression_id=8|UniProt=O89020,E9Q826|association_with_transcript=0bp_to_ENSMUST00000128740,ENSMUST00000171790,NM_145146,uc008ybb.1,uc008ybc.1_5end|description=CAGE_peak_1_at_Afm_5end|id=chr5:90947967..90947982,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!1.13e-19!49;UBERON:0005173!1.13e-19!49;UBERON:0002417!1.13e-19!49;UBERON:0000916!1.13e-19!49;UBERON:0009854!3.55e-18!23;UBERON:0009856!3.55e-18!23;UBERON:0002107!5.50e-18!22;UBERON:0007499!5.50e-18!22;UBERON:0006925!5.50e-18!22;UBERON:0009497!5.50e-18!22;UBERON:0000015!5.50e-18!22;UBERON:0002423!5.50e-18!22;UBERON:0006235!5.50e-18!22;UBERON:0008835!5.50e-18!22;UBERON:0003894!5.50e-18!22;UBERON:0004161!5.50e-18!22;UBERON:0008836!5.50e-18!22;UBERON:0005177!1.47e-16!85;UBERON:0002365!1.85e-14!25;UBERON:0002330!1.85e-14!25;UBERON:0009569!2.91e-13!66;UBERON:0002100!2.49e-11!98;UBERON:0004119!4.16e-09!130;UBERON:0000925!4.16e-09!130;UBERON:0006595!4.16e-09!130;UBERON:0005256!6.63e-09!47;UBERON:0001007!7.58e-09!128;UBERON:0001555!7.58e-09!128;UBERON:0007026!7.58e-09!128;UBERON:0000466!9.53e-09!79;UBERON:0004921!1.20e-08!126;UBERON:0004185!1.20e-08!126;UBERON:0003104!3.86e-08!131;UBERON:0009142!3.86e-08!131;UBERON:0005409!1.16e-07!59;UBERON:0000949!1.65e-07!72;UBERON:0001041!4.33e-07!92;UBERON:0001045!5.22e-07!13;UBERON:0000077!6.32e-07!97;UBERON:0001264!9.39e-07!12;UBERON:0003922!9.39e-07!12;UBERON:0002114!9.39e-07!12;UBERON:0003923!9.39e-07!12;UBERON:0003924!9.39e-07!12;UBERON:0003921!9.39e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0009854,4.72e-21,23;UBERON:0009856,4.72e-21,23;UBERON:0005172,4.88e-21,49;UBERON:0005173,4.88e-21,49;UBERON:0002417,4.88e-21,49;UBERON:0000916,4.88e-21,49;UBERON:0002107,7.90e-21,22;UBERON:0007499,7.90e-21,22;UBERON:0006925,7.90e-21,22;UBERON:0009497,7.90e-21,22;UBERON:0000015,7.90e-21,22;UBERON:0002423,7.90e-21,22;UBERON:0006235,7.90e-21,22;UBERON:0008835,7.90e-21,22;UBERON:0003894,7.90e-21,22;UBERON:0004161,7.90e-21,22;UBERON:0008836,7.90e-21,22;UBERON:0005177,3.57e-18,79;UBERON:0002365,3.74e-17,25;UBERON:0002330,3.74e-17,25;UBERON:0002100,1.04e-13,90;UBERON:0003104,2.99e-13,61;UBERON:0009142,2.99e-13,61;UBERON:0009569,1.99e-12,66;UBERON:0005256,1.34e-10,45;UBERON:0000949,8.53e-10,72;UBERON:0001264,1.17e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2667532635669,0,0,0.319984845586813,0.22940928106717,0,0,0,0.570070258369122,0,0,0,0,0,0.866554859253824,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,5.50742528533188,388.051168518605,384.863774878587,538.623785254542,644.578206108088,448.474913984433,171.342192560737,0,0,0,0,0,0,0,0,0,0,306.812084805114,0,1.7813056687779,1.56136794089522,3.95805121805784,5.76538743140146,3.16517545160507,4.46837087115678,3.14166478324189,8.89901883843746,0.578397427679647,0,0,0,0,7.45567044872489,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,1.01839363850316,0.497627882440372,0.758168275301024,0,0,0,0,2.41127708537144,0,0,0,0,0,0.378212160335639,0,0,0.278047249225598,0,0,0.59710280045548,0,0,0,1.24275463521301,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0.268412837520744,0,0,0.991256348951394,0,1.91959425481711,6.50262681209228,11.2114691350221,23.7986559055544,30.0210359190575,29.1045207952215,0,16.7992933818491,11.0587491872119,14.9217354030863,14.2323783596958,0,0.432276099749388,0.995706366271836,1.51734320762465,4.91268604221834,10.1436962105772,18.3286195060783,24.0501084087856,20.690066867644,47.8700586030628,81.62841183272,90.4312672366319,80.5783480409357,702.296273569456,18.8534969459186,28.107936301188,34.6287653072675,55.1779530176728,96.2296867412143,119.674150337267,197.359550291256,140.246971160406,333.866678436707,549.194548934494,813.872252551017,784.150672536891,507.683544673695,765.847558325043,797.961584335009,0,0.189491411770485,0,0.339490171550376,0,0,1.19021820443007,0,0,0.221464689648775,0.478364305972461,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.566153061577665,0,0,0,0,0,1.6025904330053,0.162886959353576,0,7.96470830039777,19.9080121647085,17.5347663039556,30.9312330799673,14.7650946440386,17.5238034328039,6.20227903603731,13.8142817201452,22.4593348382374,19.5942789920206,6.32511651449993,7.21948802737308,0,0,0,0,0,0,0,0,0.469343416127421,0.42366414172764,0,0,0,0,0,0,4.37221254944776,0,0,2.06386867963222,0,0.188368457004691,0,0,0,0,0,1.90934123603023,2.84702394223022,11.1825706919767,7.02034715341708,5.22720740036172,8.7345025498471,16.4534502589481,64.717655832938,4.18809507174447,7.2584385043404,0,0,0.299033092087958,0,0,0,0,0,8.98410255423256,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0.288635524920988,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,1.19707462020309,3.58540572083682,15.5588298923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| ||
|EntrezGene=280662 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=O89020,E9Q826 | |||
|association_with_transcript=0bp_to_ENSMUST00000128740,ENSMUST00000171790,NM_145146,uc008ybb.1,uc008ybc.1_5end | |||
|description=CAGE_peak_1_at_Afm_5end | |||
|id=chr5:90947967..90947982,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!1.13e-19!49;UBERON:0005173!1.13e-19!49;UBERON:0002417!1.13e-19!49;UBERON:0000916!1.13e-19!49;UBERON:0009854!3.55e-18!23;UBERON:0009856!3.55e-18!23;UBERON:0002107!5.50e-18!22;UBERON:0007499!5.50e-18!22;UBERON:0006925!5.50e-18!22;UBERON:0009497!5.50e-18!22;UBERON:0000015!5.50e-18!22;UBERON:0002423!5.50e-18!22;UBERON:0006235!5.50e-18!22;UBERON:0008835!5.50e-18!22;UBERON:0003894!5.50e-18!22;UBERON:0004161!5.50e-18!22;UBERON:0008836!5.50e-18!22;UBERON:0005177!1.47e-16!85;UBERON:0002365!1.85e-14!25;UBERON:0002330!1.85e-14!25;UBERON:0009569!2.91e-13!66;UBERON:0002100!2.49e-11!98;UBERON:0004119!4.16e-09!130;UBERON:0000925!4.16e-09!130;UBERON:0006595!4.16e-09!130;UBERON:0005256!6.63e-09!47;UBERON:0001007!7.58e-09!128;UBERON:0001555!7.58e-09!128;UBERON:0007026!7.58e-09!128;UBERON:0000466!9.53e-09!79;UBERON:0004921!1.20e-08!126;UBERON:0004185!1.20e-08!126;UBERON:0003104!3.86e-08!131;UBERON:0009142!3.86e-08!131;UBERON:0005409!1.16e-07!59;UBERON:0000949!1.65e-07!72;UBERON:0001041!4.33e-07!92;UBERON:0001045!5.22e-07!13;UBERON:0000077!6.32e-07!97;UBERON:0001264!9.39e-07!12;UBERON:0003922!9.39e-07!12;UBERON:0002114!9.39e-07!12;UBERON:0003923!9.39e-07!12;UBERON:0003924!9.39e-07!12;UBERON:0003921!9.39e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,4.72e-21,23;UBERON:0009856,4.72e-21,23;UBERON:0005172,4.88e-21,49;UBERON:0005173,4.88e-21,49;UBERON:0002417,4.88e-21,49;UBERON:0000916,4.88e-21,49;UBERON:0002107,7.90e-21,22;UBERON:0007499,7.90e-21,22;UBERON:0006925,7.90e-21,22;UBERON:0009497,7.90e-21,22;UBERON:0000015,7.90e-21,22;UBERON:0002423,7.90e-21,22;UBERON:0006235,7.90e-21,22;UBERON:0008835,7.90e-21,22;UBERON:0003894,7.90e-21,22;UBERON:0004161,7.90e-21,22;UBERON:0008836,7.90e-21,22;UBERON:0005177,3.57e-18,79;UBERON:0002365,3.74e-17,25;UBERON:0002330,3.74e-17,25;UBERON:0002100,1.04e-13,90;UBERON:0003104,2.99e-13,61;UBERON:0009142,2.99e-13,61;UBERON:0009569,1.99e-12,66;UBERON:0005256,1.34e-10,45;UBERON:0000949,8.53e-10,72;UBERON:0001264,1.17e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2667532635669,0,0,0.319984845586813,0.22940928106717,0,0,0,0.570070258369122,0,0,0,0,0,0.866554859253824,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,5.50742528533188,388.051168518605,384.863774878587,538.623785254542,644.578206108088,448.474913984433,171.342192560737,0,0,0,0,0,0,0,0,0,0,306.812084805114,0,1.7813056687779,1.56136794089522,3.95805121805784,5.76538743140146,3.16517545160507,4.46837087115678,3.14166478324189,8.89901883843746,0.578397427679647,0,0,0,0,7.45567044872489,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,1.01839363850316,0.497627882440372,0.758168275301024,0,0,0,0,2.41127708537144,0,0,0,0,0,0.378212160335639,0,0,0.278047249225598,0,0,0.59710280045548,0,0,0,1.24275463521301,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0.268412837520744,0,0,0.991256348951394,0,1.91959425481711,6.50262681209228,11.2114691350221,23.7986559055544,30.0210359190575,29.1045207952215,0,16.7992933818491,11.0587491872119,14.9217354030863,14.2323783596958,0,0.432276099749388,0.995706366271836,1.51734320762465,4.91268604221834,10.1436962105772,18.3286195060783,24.0501084087856,20.690066867644,47.8700586030628,81.62841183272,90.4312672366319,80.5783480409357,702.296273569456,18.8534969459186,28.107936301188,34.6287653072675,55.1779530176728,96.2296867412143,119.674150337267,197.359550291256,140.246971160406,333.866678436707,549.194548934494,813.872252551017,784.150672536891,507.683544673695,765.847558325043,797.961584335009,0,0.189491411770485,0,0.339490171550376,0,0,1.19021820443007,0,0,0.221464689648775,0.478364305972461,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.566153061577665,0,0,0,0,0,1.6025904330053,0.162886959353576,0,7.96470830039777,19.9080121647085,17.5347663039556,30.9312330799673,14.7650946440386,17.5238034328039,6.20227903603731,13.8142817201452,22.4593348382374,19.5942789920206,6.32511651449993,7.21948802737308,0,0,0,0,0,0,0,0,0.469343416127421,0.42366414172764,0,0,0,0,0,0,4.37221254944776,0,0,2.06386867963222,0,0.188368457004691,0,0,0,0,0,1.90934123603023,2.84702394223022,11.1825706919767,7.02034715341708,5.22720740036172,8.7345025498471,16.4534502589481,64.717655832938,4.18809507174447,7.2584385043404,0,0,0.299033092087958,0,0,0,0,0,8.98410255423256,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0.288635524920988,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,1.19707462020309,3.58540572083682,15.5588298923708,5.44994222832754,7.72142735490059,15.1127774905098,12.5681384915725,17.329637317958,16.172621552883,19.7713853914387,14.5242282867279,15.1699242101209,16.1983635584319,14.6460445836814,13.3362233559261,11.8202012463753,15.4327376370964,17.3076078337389,16.1918812147837,13.7147700954166,14.0205886865877,16.9289694862598,15.1160273297622,16.8455790943442,15.6537024599602,10.426894453748,13.41655528333,15.75327720612,12.3451299764702,9.01626137743724,11.4265199555654,12.2769312950907,14.2541893891089,17.1686883773216,0,13.8019648982791,12.8922632428979,0.57386499620653,7.27951683094401,2.08681052058379 | |||
|short_description=p1@Afm | |||
}} |
Revision as of 08:17, 14 September 2013
Short description: | p1@Afm |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Afm_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000128740, ENSMUST00000171790, NM_145146, uc008ybb.1, uc008ybc.1_5end |
EntrezGene: | Afm |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 4.72e-21 | 23 |
sac | 4.72e-21 | 23 |
abdomen element | 4.88e-21 | 49 |
abdominal segment element | 4.88e-21 | 49 |
abdominal segment of trunk | 4.88e-21 | 49 |
abdomen | 4.88e-21 | 49 |
liver | 7.90e-21 | 22 |
epithelial sac | 7.90e-21 | 22 |
digestive gland | 7.90e-21 | 22 |
epithelium of foregut-midgut junction | 7.90e-21 | 22 |
anatomical boundary | 7.90e-21 | 22 |
hepatobiliary system | 7.90e-21 | 22 |
foregut-midgut junction | 7.90e-21 | 22 |
hepatic diverticulum | 7.90e-21 | 22 |
liver primordium | 7.90e-21 | 22 |
septum transversum | 7.90e-21 | 22 |
liver bud | 7.90e-21 | 22 |
trunk region element | 3.57e-18 | 79 |
exocrine gland | 3.74e-17 | 25 |
exocrine system | 3.74e-17 | 25 |
trunk | 1.04e-13 | 90 |
mesenchyme | 2.99e-13 | 61 |
entire embryonic mesenchyme | 2.99e-13 | 61 |
subdivision of trunk | 1.99e-12 | 66 |
trunk mesenchyme | 1.34e-10 | 45 |
endocrine system | 8.53e-10 | 72 |
pancreas | 1.17e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.