FFCP PHASE1:Mm9::chr6:143591339..143591345,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=180|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:143591339..143591345,+|id=chr6:143591339..143591345,+|ontology_enrichment_celltype=CL:0000239!6.49e-07!6;CL:0000677!6.49e-07!6;CL:0000212!6.49e-07!6;CL:0000584!6.49e-07!6|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001962!5.74e-10!2;UBERON:0001961!5.74e-10!2;UBERON:0001744!5.74e-10!2;UBERON:0000344!5.96e-10!15;UBERON:0000160!1.12e-09!43;UBERON:0001007!1.79e-08!128;UBERON:0001555!1.79e-08!128;UBERON:0007026!1.79e-08!128;UBERON:0004119!2.72e-08!130;UBERON:0000925!2.72e-08!130;UBERON:0006595!2.72e-08!130;UBERON:0004923!4.91e-08!24;UBERON:0002465!6.65e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0001962,1.68e-58,2;UBERON:0001961,1.68e-58,2;UBERON:0001744,1.68e-58,2;UBERON:0002465,1.70e-39,3;UBERON:0003199,2.87e-30,1;UBERON:0000344,2.29e-18,15;UBERON:0004923,6.63e-12,24|phase1_expression=0,0,0,0.60492842261366,1.00179145989269,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51983330145495,3.67054849707472,0,0,0,0.570070258369122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr6:143591339..143591345,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=180 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:143591339..143591345,+ | |||
|id=chr6:143591339..143591345,+ | |||
|ontology_enrichment_celltype=CL:0000239!6.49e-07!6;CL:0000677!6.49e-07!6;CL:0000212!6.49e-07!6;CL:0000584!6.49e-07!6 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001962!5.74e-10!2;UBERON:0001961!5.74e-10!2;UBERON:0001744!5.74e-10!2;UBERON:0000344!5.96e-10!15;UBERON:0000160!1.12e-09!43;UBERON:0001007!1.79e-08!128;UBERON:0001555!1.79e-08!128;UBERON:0007026!1.79e-08!128;UBERON:0004119!2.72e-08!130;UBERON:0000925!2.72e-08!130;UBERON:0006595!2.72e-08!130;UBERON:0004923!4.91e-08!24;UBERON:0002465!6.65e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,1.68e-58,2;UBERON:0001961,1.68e-58,2;UBERON:0001744,1.68e-58,2;UBERON:0002465,1.70e-39,3;UBERON:0003199,2.87e-30,1;UBERON:0000344,2.29e-18,15;UBERON:0004923,6.63e-12,24 | |||
|phase1_expression=0,0,0,0.60492842261366,1.00179145989269,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51983330145495,3.67054849707472,0,0,0,0.570070258369122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr6:143591339..143591345,+ | |||
}} |
Revision as of 09:19, 14 September 2013
Short description: | p@chr6:143591339..143591345, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:143591339..143591345, + |
Coexpression cluster: | MCL_coexpression_mm9:180 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 1.68e-58 | 2 |
mucosa-associated lymphoid tissue | 1.68e-58 | 2 |
lymphoid tissue | 1.68e-58 | 2 |
lymphoid system | 1.70e-39 | 3 |
egg chamber | 2.87e-30 | 1 |
mucosa | 2.29e-18 | 15 |
organ component layer | 6.63e-12 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.