FFCP PHASE1:Mm9::chr6:40578823..40578838,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=232714|HGNC=|MCL_coexpression_id=12|UniProt=B5THE2,Q6XK24|association_with_transcript=0bp_to_ENSMUST00000071535,NM_001171003,uc009bnf.2,uc012ekg.1_5end|description=CAGE_peak_1_at_Mgam_5end|id=chr6:40578823..40578838,+|ontology_enrichment_celltype=CL:0002563!8.49e-11!9;CL:0002251!8.49e-11!9;CL:0000239!3.95e-08!6;CL:0000677!3.95e-08!6;CL:0000212!3.95e-08!6;CL:0000584!3.95e-08!6;CL:0000075!9.37e-07!7|ontology_enrichment_celltype_v019_2=CL:0002563,9.76e-15,9;CL:0002251,9.76e-15,9;CL:0000239,6.18e-11,6;CL:0000677,6.18e-11,6;CL:0000584,6.18e-11,6;CL:0000075,3.22e-09,7;CL:0002076,5.43e-08,15;CL:0000066,1.22e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.28e-20!43;UBERON:0000344!1.67e-17!15;UBERON:0005409!1.25e-16!59;UBERON:0001242!2.01e-15!13;UBERON:0000060!2.01e-15!13;UBERON:0001262!2.01e-15!13;UBERON:0004786!2.01e-15!13;UBERON:0003350!8.49e-11!9;UBERON:0004808!8.49e-11!9;UBERON:0001277!8.49e-11!9;UBERON:0004923!5.97e-09!24;UBERON:0000485!2.47e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.69e-39,31;UBERON:0000344,2.56e-24,15;UBERON:0005409,1.01e-22,47;UBERON:0001242,2.41e-21,13;UBERON:0001262,2.41e-21,13;UBERON:0004786,2.41e-21,13;UBERON:0003350,9.76e-15,9;UBERON:0004808,9.76e-15,9;UBERON:0001277,9.76e-15,9;UBERON:0004923,1.53e-13,24;UBERON:0000485,1.16e-11,11;UBERON:0002108,7.46e-08,4|phase1_expression=0,1172.55736966825,994.173338066136,1750.66285504393,1596.35469133901,219.250329116928,240.387407172796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,518.535442273431,652.898813917166,985.382050421375,835.247510552446,856.282678693723,1178.52524746843,1600.89538423508,573.395100554618,0,0,0,22.2415747208481,36.4053873335098,23.4794759701724,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,91.710206346034,0,0,0,0,0,0,0,0,0,0,484.368017768252,0,0,0,0,0,0,0,3.01599819191221,0,0,0,0,0,0,39.1422698558057,0,0,1190.68533432724,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2530.67745887291,1050.3976507876,0,0,0.902072229254653,19.3616183638409,28.4643896121434,27.3924901602085,1209.10004881542,79.0554982675252,21.3634927480229,27.65494961372,20.4712291475076,1140.60182958221,713.68784068624,1230.89220998524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,11.8877014857382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,823.433363479328,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.972048067396211,0.209088296014469,0.436725127492355,0.134864346384821,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596044064343795,0.120195449519969,0,0,0,0.100826185136841,0.194915761479505,0.288635524920988,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.551530525350042,0.888986911206461,2.06035057238894,0.962757628775446,0.758091635291392,1.52087579934144,1.13175804831646,2.06011316433741,1.79270426733634,1.7230640686684,0.476293691283074,0.927074607558844,1.92909220463705,0.412085900803307,0.588795680537589,2.74295401908332,1.06485483695602,2.62279808942053,1.88950341622027,2.4468438907986,1.4384483341585,1.09756783723664,0.526139422875686,1.35804113845862,1.12228454331548,1.66089025373844,1.87158516513571,1.22769312950907,0.619747364743864,1.35034627686799,0,2.57324769289949,3.00819475667618,0,0,0|short_description=p1@Mgam}} | ||
|EntrezGene=232714 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=B5THE2,Q6XK24 | |||
|association_with_transcript=0bp_to_ENSMUST00000071535,NM_001171003,uc009bnf.2,uc012ekg.1_5end | |||
|description=CAGE_peak_1_at_Mgam_5end | |||
|id=chr6:40578823..40578838,+ | |||
|ontology_enrichment_celltype=CL:0002563!8.49e-11!9;CL:0002251!8.49e-11!9;CL:0000239!3.95e-08!6;CL:0000677!3.95e-08!6;CL:0000212!3.95e-08!6;CL:0000584!3.95e-08!6;CL:0000075!9.37e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,9.76e-15,9;CL:0002251,9.76e-15,9;CL:0000239,6.18e-11,6;CL:0000677,6.18e-11,6;CL:0000584,6.18e-11,6;CL:0000075,3.22e-09,7;CL:0002076,5.43e-08,15;CL:0000066,1.22e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.28e-20!43;UBERON:0000344!1.67e-17!15;UBERON:0005409!1.25e-16!59;UBERON:0001242!2.01e-15!13;UBERON:0000060!2.01e-15!13;UBERON:0001262!2.01e-15!13;UBERON:0004786!2.01e-15!13;UBERON:0003350!8.49e-11!9;UBERON:0004808!8.49e-11!9;UBERON:0001277!8.49e-11!9;UBERON:0004923!5.97e-09!24;UBERON:0000485!2.47e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.69e-39,31;UBERON:0000344,2.56e-24,15;UBERON:0005409,1.01e-22,47;UBERON:0001242,2.41e-21,13;UBERON:0001262,2.41e-21,13;UBERON:0004786,2.41e-21,13;UBERON:0003350,9.76e-15,9;UBERON:0004808,9.76e-15,9;UBERON:0001277,9.76e-15,9;UBERON:0004923,1.53e-13,24;UBERON:0000485,1.16e-11,11;UBERON:0002108,7.46e-08,4 | |||
|phase1_expression=0,1172.55736966825,994.173338066136,1750.66285504393,1596.35469133901,219.250329116928,240.387407172796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,518.535442273431,652.898813917166,985.382050421375,835.247510552446,856.282678693723,1178.52524746843,1600.89538423508,573.395100554618,0,0,0,22.2415747208481,36.4053873335098,23.4794759701724,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,91.710206346034,0,0,0,0,0,0,0,0,0,0,484.368017768252,0,0,0,0,0,0,0,3.01599819191221,0,0,0,0,0,0,39.1422698558057,0,0,1190.68533432724,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2530.67745887291,1050.3976507876,0,0,0.902072229254653,19.3616183638409,28.4643896121434,27.3924901602085,1209.10004881542,79.0554982675252,21.3634927480229,27.65494961372,20.4712291475076,1140.60182958221,713.68784068624,1230.89220998524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,11.8877014857382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,823.433363479328,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.972048067396211,0.209088296014469,0.436725127492355,0.134864346384821,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596044064343795,0.120195449519969,0,0,0,0.100826185136841,0.194915761479505,0.288635524920988,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.551530525350042,0.888986911206461,2.06035057238894,0.962757628775446,0.758091635291392,1.52087579934144,1.13175804831646,2.06011316433741,1.79270426733634,1.7230640686684,0.476293691283074,0.927074607558844,1.92909220463705,0.412085900803307,0.588795680537589,2.74295401908332,1.06485483695602,2.62279808942053,1.88950341622027,2.4468438907986,1.4384483341585,1.09756783723664,0.526139422875686,1.35804113845862,1.12228454331548,1.66089025373844,1.87158516513571,1.22769312950907,0.619747364743864,1.35034627686799,0,2.57324769289949,3.00819475667618,0,0,0 | |||
|short_description=p1@Mgam | |||
}} |
Revision as of 09:49, 14 September 2013
Short description: | p1@Mgam |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mgam_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000071535, NM_001171003, uc009bnf.2, uc012ekg.1_5end |
EntrezGene: | Mgam |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 9.76e-15 | 9 |
epithelial cell of alimentary canal | 9.76e-15 | 9 |
brush border epithelial cell | 6.18e-11 | 6 |
gut absorptive cell | 6.18e-11 | 6 |
enterocyte | 6.18e-11 | 6 |
columnar/cuboidal epithelial cell | 3.22e-09 | 7 |
endo-epithelial cell | 5.43e-08 | 15 |
epithelial cell | 1.22e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.69e-39 | 31 |
mucosa | 2.56e-24 | 15 |
gastrointestinal system | 1.01e-22 | 47 |
intestinal mucosa | 2.41e-21 | 13 |
wall of intestine | 2.41e-21 | 13 |
gastrointestinal system mucosa | 2.41e-21 | 13 |
epithelium of mucosa | 9.76e-15 | 9 |
gastrointestinal system epithelium | 9.76e-15 | 9 |
intestinal epithelium | 9.76e-15 | 9 |
organ component layer | 1.53e-13 | 24 |
simple columnar epithelium | 1.16e-11 | 11 |
small intestine | 7.46e-08 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.