FFCP PHASE1:Mm9::chr6:65094976..65094993,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=54486|HGNC=|MCL_coexpression_id=106|UniProt=Q9JHF7|association_with_transcript=-74bp_to_ENSMUST00000031982_5end|description=CAGE_peak_4_at_Hpgds_5end|id=chr6:65094976..65094993,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002476,7.56e-10,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000020!2.71e-08!12;UBERON:0001032!2.71e-08!12;UBERON:0004456!2.71e-08!12;UBERON:0005085!1.84e-07!13;UBERON:0000970!2.22e-07!9;UBERON:0000019!2.22e-07!9;UBERON:0000047!2.22e-07!9;UBERON:0004088!2.22e-07!9;UBERON:0002104!2.22e-07!9;UBERON:0001456!2.22e-07!9;UBERON:0003072!2.22e-07!9;UBERON:0003071!2.22e-07!9;UBERON:0004128!2.22e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000474,1.33e-31,9;UBERON:0003100,5.07e-26,11;UBERON:0003134,1.78e-20,8;UBERON:0006834,5.15e-19,1;UBERON:0000993,1.16e-18,1;UBERON:0005795,1.74e-18,4;UBERON:0000995,1.74e-18,4;UBERON:0003975,5.16e-15,5;UBERON:0005156,1.89e-11,26;UBERON:0000990,1.89e-11,26;UBERON:0004175,8.40e-09,9;UBERON:0003133,2.29e-07,24;UBERON:0000992,3.64e-07,3|phase1_expression=0.960893082628764,0,0,0,0,0,0,0.129123323441576,0,0,0,0.0797721589953364,0.171200729931206,0,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0,0.252722758433675,0,0.910843100738926,0.459804208866946,0.360124259610698,0.150704817835715,0.136072998302656,0.12811372028485,0.0937017245597288,0.258703370739016,0,0.378212160335639,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0.210407459670956,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08781136763742,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,3.69044221541498,0,0,3.13443233647817,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0.484393280087717,0.180938774784468,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0.279902904647316,0.138199973804424,0,0,0,0.108005340821801,0.209088296014469,0.436725127492355,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0,10.5102186252662,1.46521299413812,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.290692833264657,0,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0,0,0.191288332068843,0,0.231867835620421|short_description=p4@Hpgds}} | ||
|EntrezGene=54486 | |||
|HGNC= | |||
|MCL_coexpression_id=106 | |||
|UniProt=Q9JHF7 | |||
|association_with_transcript=-74bp_to_ENSMUST00000031982_5end | |||
|description=CAGE_peak_4_at_Hpgds_5end | |||
|id=chr6:65094976..65094993,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,7.56e-10,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000020!2.71e-08!12;UBERON:0001032!2.71e-08!12;UBERON:0004456!2.71e-08!12;UBERON:0005085!1.84e-07!13;UBERON:0000970!2.22e-07!9;UBERON:0000019!2.22e-07!9;UBERON:0000047!2.22e-07!9;UBERON:0004088!2.22e-07!9;UBERON:0002104!2.22e-07!9;UBERON:0001456!2.22e-07!9;UBERON:0003072!2.22e-07!9;UBERON:0003071!2.22e-07!9;UBERON:0004128!2.22e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000474,1.33e-31,9;UBERON:0003100,5.07e-26,11;UBERON:0003134,1.78e-20,8;UBERON:0006834,5.15e-19,1;UBERON:0000993,1.16e-18,1;UBERON:0005795,1.74e-18,4;UBERON:0000995,1.74e-18,4;UBERON:0003975,5.16e-15,5;UBERON:0005156,1.89e-11,26;UBERON:0000990,1.89e-11,26;UBERON:0004175,8.40e-09,9;UBERON:0003133,2.29e-07,24;UBERON:0000992,3.64e-07,3 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0.129123323441576,0,0,0,0.0797721589953364,0.171200729931206,0,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0,0.252722758433675,0,0.910843100738926,0.459804208866946,0.360124259610698,0.150704817835715,0.136072998302656,0.12811372028485,0.0937017245597288,0.258703370739016,0,0.378212160335639,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0.210407459670956,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08781136763742,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,3.69044221541498,0,0,3.13443233647817,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0.484393280087717,0.180938774784468,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0.279902904647316,0.138199973804424,0,0,0,0.108005340821801,0.209088296014469,0.436725127492355,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0,10.5102186252662,1.46521299413812,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.290692833264657,0,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p4@Hpgds | |||
}} |
Revision as of 10:26, 14 September 2013
Short description: | p4@Hpgds |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Hpgds_5end |
Coexpression cluster: | MCL_coexpression_mm9:106 |
Association with transcript: | -74bp_to_ENSMUST00000031982_5end |
EntrezGene: | Hpgds |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 7.56e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
female reproductive system | 1.33e-31 | 9 |
female organism | 5.07e-26 | 11 |
female reproductive organ | 1.78e-20 | 8 |
uterus or analog | 5.15e-19 | 1 |
oviduct | 1.16e-18 | 1 |
embryonic uterus | 1.74e-18 | 4 |
uterus | 1.74e-18 | 4 |
internal female genitalia | 5.16e-15 | 5 |
reproductive structure | 1.89e-11 | 26 |
reproductive system | 1.89e-11 | 26 |
internal genitalia | 8.40e-09 | 9 |
reproductive organ | 2.29e-07 | 24 |
female gonad | 3.64e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.