FFCP PHASE1:Mm9::chr7:140900711..140900723,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22276|HGNC=|UniProt=E9Q9B5|association_with_transcript=16bp_to_ENSMUST00000124759_5end|description=CAGE_peak_5_at_Uros_5end|id=chr7:140900711..140900723,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009854!6.79e-10!23;UBERON:0009856!6.79e-10!23;UBERON:0002107!2.27e-09!22;UBERON:0007499!2.27e-09!22;UBERON:0006925!2.27e-09!22;UBERON:0009497!2.27e-09!22;UBERON:0000015!2.27e-09!22;UBERON:0002423!2.27e-09!22;UBERON:0006235!2.27e-09!22;UBERON:0008835!2.27e-09!22;UBERON:0003894!2.27e-09!22;UBERON:0004161!2.27e-09!22;UBERON:0008836!2.27e-09!22;UBERON:0005172!4.61e-08!49;UBERON:0005173!4.61e-08!49;UBERON:0002417!4.61e-08!49;UBERON:0000916!4.61e-08!49;UBERON:0002365!4.04e-07!25;UBERON:0002330!4.04e-07!25|ontology_enrichment_uberon_v019_2=UBERON:0009854,2.28e-12,23;UBERON:0009856,2.28e-12,23;UBERON:0002107,1.87e-11,22;UBERON:0007499,1.87e-11,22;UBERON:0006925,1.87e-11,22;UBERON:0009497,1.87e-11,22;UBERON:0000015,1.87e-11,22;UBERON:0002423,1.87e-11,22;UBERON:0006235,1.87e-11,22;UBERON:0008835,1.87e-11,22;UBERON:0003894,1.87e-11,22;UBERON:0004161,1.87e-11,22;UBERON:0008836,1.87e-11,22;UBERON:0002365,1.73e-09,25;UBERON:0002330,1.73e-09,25;UBERON:0005172,1.12e-07,49;UBERON:0005173,1.12e-07,49;UBERON:0002417,1.12e-07,49;UBERON:0000916,1.12e-07,49;UBERON:0000970,2.53e-07,9;UBERON:0000019,2.53e-07,9;UBERON:0000047,2.53e-07,9;UBERON:0010312,2.53e-07,9;UBERON:0004088,2.53e-07,9;UBERON:0002104,2.53e-07,9;UBERON:0001456,2.53e-07,9;UBERON:0003072,2.53e-07,9;UBERON:0004128,2.53e-07,9;UBERON:0003071,2.53e-07,9|phase1_expression=0.320297694209588,1.04692622291808,0.454999239389536,0.90739263392049,2.00358291978539,0.33575854382378,0.934450562382103,1.29123323441576,3.801295498095,3.27690336850791,1.02730780935303,0.398860794976682,1.19840510951844,1.31130603628496,0.333109761815663,0.607425802169478,0,0.946386496074713,1.09691546884591,0.42438965179803,0.935476191661768,0.496454756004426,0.522399578277871,0.319984845586813,0.68822784320151,0.57423196411502,0.430761996159075,0.430942465371778,0.570070258369122,1.26015064879965,0.443461021310609,2.54012269383853,4.30545351309199,0,0.866554859253824,0.831173226792462,1.22501613757421,0.418531630736908,1.5626706890476,0,0,0.683045484958446,1.45653105909346,0.377690453926732,0.304130793658544,0.550640256485045,0,0,1.09843091367236,0.58328969722285,0,0,1.17447824240415,1.45072428402269,0.336093799142464,0,0.286533439938757,0,0.202316460859598,1.05798195854407,0,0.677689064138264,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0.135005938331691,0.420649922702764,0.285650984403804,0,0.122490799214954,0.191690942036473,0,0,0.510749352340751,0.307213066512487,0.263772575460388,0.0914876436024097,0,0,0.56276261003168,0.30559649555362,0,0.427115042397309,0.372798891650601,0.227178579999552,0.151143120213571,2.6087803983151,7.74381489283248,0.679971333707751,3.2382191498269,4.54843492213368,2.68816132258401,2.52799956237153,0.340860645156116,0,0.35333957451034,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0,1.82694207550496,1.03575153458869,0.890652834388949,0,0,0.461230994512117,0.904335843315735,0.823120949949934,0.753999547978053,0.247194967734374,0.86759614151947,0.884610551949874,0.485300549842228,1.10420759230197,0.969750506270444,1.86391761218122,0.292780797011547,0.41889341362691,0.255457055208591,0.718890747035522,0.599902730993408,0.381210681219194,0.449371918214468,0,0.125654352112864,0.173824320192276,0.511430914660661,0.41557608911912,0.324482526135515,0.611036183101898,0.746441823660558,3.53811861807145,4.41927897361595,1.04096354370163,0.919608417733892,1.0803727788321,1.20563854268572,2.85753296435577,3.71529788826064,2.71735001223214,1.55222022443409,0.646703978798527,0.567318240503458,0.351902248327898,0.657587197282725,0,0.696504333044333,0,0.199034266818493,1.40442637462647,0.51469581422943,0.568326998791185,1.24275463521301,0.938104239924385,0.540186184383045,0.23674473558521,0,0.308534225774757,0,0.804820204198858,0.583826711835847,0.493679549740441,0.985004784474571,0.810688095458557,1.02339991197733,1.53685080703735,1.34206418760372,0.420579897128254,0.411618449517138,0.330418782983798,0,0.426576501070468,0.464473343720877,0.644337306610467,0.201683524623343,0.667134131534611,0,0.474529061544512,0,0.502670417600539,0.397912944082302,0.58489226135736,0.898819408654221,0,0.597423819763102,0.948339504765408,0.228497025219458,0,0.203651327845314,0.581857461502877,0.98190147846446,0.632365371242573,1.47610147979602,1.8839847340965,2.71473760627961,4.44678940630723,0.333690211432188,0.982794975566015,1.12431056192427,1.42002084971952,1.20588579876208,1.52775511068852,0.863088412352432,0.810676133875177,1.09824565275233,1.43768206527355,0.744281895337007,3.74445207737473,4.79899868099512,4.4849353380478,5.78932225636041,0.184753190166605,0,0.162964976442026,0.169745085775188,0.234690248288502,0.33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| ||
|EntrezGene=22276 | |||
|HGNC= | |||
|UniProt=E9Q9B5 | |||
|association_with_transcript=16bp_to_ENSMUST00000124759_5end | |||
|description=CAGE_peak_5_at_Uros_5end | |||
|id=chr7:140900711..140900723,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!6.79e-10!23;UBERON:0009856!6.79e-10!23;UBERON:0002107!2.27e-09!22;UBERON:0007499!2.27e-09!22;UBERON:0006925!2.27e-09!22;UBERON:0009497!2.27e-09!22;UBERON:0000015!2.27e-09!22;UBERON:0002423!2.27e-09!22;UBERON:0006235!2.27e-09!22;UBERON:0008835!2.27e-09!22;UBERON:0003894!2.27e-09!22;UBERON:0004161!2.27e-09!22;UBERON:0008836!2.27e-09!22;UBERON:0005172!4.61e-08!49;UBERON:0005173!4.61e-08!49;UBERON:0002417!4.61e-08!49;UBERON:0000916!4.61e-08!49;UBERON:0002365!4.04e-07!25;UBERON:0002330!4.04e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,2.28e-12,23;UBERON:0009856,2.28e-12,23;UBERON:0002107,1.87e-11,22;UBERON:0007499,1.87e-11,22;UBERON:0006925,1.87e-11,22;UBERON:0009497,1.87e-11,22;UBERON:0000015,1.87e-11,22;UBERON:0002423,1.87e-11,22;UBERON:0006235,1.87e-11,22;UBERON:0008835,1.87e-11,22;UBERON:0003894,1.87e-11,22;UBERON:0004161,1.87e-11,22;UBERON:0008836,1.87e-11,22;UBERON:0002365,1.73e-09,25;UBERON:0002330,1.73e-09,25;UBERON:0005172,1.12e-07,49;UBERON:0005173,1.12e-07,49;UBERON:0002417,1.12e-07,49;UBERON:0000916,1.12e-07,49;UBERON:0000970,2.53e-07,9;UBERON:0000019,2.53e-07,9;UBERON:0000047,2.53e-07,9;UBERON:0010312,2.53e-07,9;UBERON:0004088,2.53e-07,9;UBERON:0002104,2.53e-07,9;UBERON:0001456,2.53e-07,9;UBERON:0003072,2.53e-07,9;UBERON:0004128,2.53e-07,9;UBERON:0003071,2.53e-07,9 | |||
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| |||
|short_description=p5@Uros | |||
}} |
Revision as of 12:06, 14 September 2013
Short description: | p5@Uros |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Uros_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENSMUST00000124759_5end |
EntrezGene: | Uros |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 2.28e-12 | 23 |
sac | 2.28e-12 | 23 |
liver | 1.87e-11 | 22 |
epithelial sac | 1.87e-11 | 22 |
digestive gland | 1.87e-11 | 22 |
epithelium of foregut-midgut junction | 1.87e-11 | 22 |
anatomical boundary | 1.87e-11 | 22 |
hepatobiliary system | 1.87e-11 | 22 |
foregut-midgut junction | 1.87e-11 | 22 |
hepatic diverticulum | 1.87e-11 | 22 |
liver primordium | 1.87e-11 | 22 |
septum transversum | 1.87e-11 | 22 |
liver bud | 1.87e-11 | 22 |
exocrine gland | 1.73e-09 | 25 |
exocrine system | 1.73e-09 | 25 |
abdomen element | 1.12e-07 | 49 |
abdominal segment element | 1.12e-07 | 49 |
abdominal segment of trunk | 1.12e-07 | 49 |
abdomen | 1.12e-07 | 49 |
eye | 2.53e-07 | 9 |
camera-type eye | 2.53e-07 | 9 |
simple eye | 2.53e-07 | 9 |
immature eye | 2.53e-07 | 9 |
ocular region | 2.53e-07 | 9 |
visual system | 2.53e-07 | 9 |
face | 2.53e-07 | 9 |
optic cup | 2.53e-07 | 9 |
optic vesicle | 2.53e-07 | 9 |
eye primordium | 2.53e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.