FFCP PHASE1:Mm9::chr8:107655791..107655803,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=234677|HGNC=|MCL_coexpression_id=25|UniProt=Q8R0W5,G3XA24|association_with_transcript=91bp_to_ENSMUST00000057434,ENSMUST00000161289,NM_146213,uc009nbo.1_5end|description=CAGE_peak_1_at_Ces4a_5end|id=chr8:107655791..107655803,+|ontology_enrichment_celltype=CL:0000057!9.48e-07!1;CL:0000632!9.48e-07!1|ontology_enrichment_celltype_v019_2=CL:0000057,4.58e-11,1;CL:0000632,4.58e-11,1;CL:0000182,1.71e-08,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000014!3.21e-27!5;UBERON:0001003!3.21e-27!5;UBERON:0002097!3.21e-27!5;UBERON:0002199!3.21e-27!5;UBERON:0007029!3.21e-27!5;UBERON:0007376!3.21e-27!5;UBERON:0002416!3.21e-27!5;UBERON:0007383!3.21e-27!5;UBERON:0002107!4.54e-11!22;UBERON:0007499!4.54e-11!22;UBERON:0006925!4.54e-11!22;UBERON:0009497!4.54e-11!22;UBERON:0000015!4.54e-11!22;UBERON:0002423!4.54e-11!22;UBERON:0006235!4.54e-11!22;UBERON:0008835!4.54e-11!22;UBERON:0003894!4.54e-11!22;UBERON:0004161!4.54e-11!22;UBERON:0008836!4.54e-11!22;UBERON:0009854!1.47e-10!23;UBERON:0009856!1.47e-10!23;UBERON:0002365!1.17e-09!25;UBERON:0002330!1.17e-09!25;UBERON:0005057!4.15e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0000014,5.42e-32,5;UBERON:0001003,5.42e-32,5;UBERON:0002097,5.42e-32,5;UBERON:0002199,5.42e-32,5;UBERON:0007029,5.42e-32,5;UBERON:0007376,5.42e-32,5;UBERON:0002416,5.42e-32,5;UBERON:0007383,5.42e-32,5;UBERON:0003102,1.38e-07,22;UBERON:0002107,2.31e-07,22;UBERON:0007499,2.31e-07,22;UBERON:0006925,2.31e-07,22;UBERON:0009497,2.31e-07,22;UBERON:0000015,2.31e-07,22;UBERON:0002423,2.31e-07,22;UBERON:0006235,2.31e-07,22;UBERON:0008835,2.31e-07,22;UBERON:0003894,2.31e-07,22;UBERON:0004161,2.31e-07,22;UBERON:0008836,2.31e-07,22;UBERON:0009854,4.69e-07,23;UBERON:0009856,4.69e-07,23|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30211938490693,0,1.07940638327563,1.29955283489534,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,5.56131981917928,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.46261131177108,0.807322133479528,8.32318364008551,40.228479929057,31.8433345505419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,3.75005412503176,0|short_description=p1@Ces4a}} | ||
|EntrezGene=234677 | |||
|HGNC= | |||
|MCL_coexpression_id=25 | |||
|UniProt=Q8R0W5,G3XA24 | |||
|association_with_transcript=91bp_to_ENSMUST00000057434,ENSMUST00000161289,NM_146213,uc009nbo.1_5end | |||
|description=CAGE_peak_1_at_Ces4a_5end | |||
|id=chr8:107655791..107655803,+ | |||
|ontology_enrichment_celltype=CL:0000057!9.48e-07!1;CL:0000632!9.48e-07!1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.58e-11,1;CL:0000632,4.58e-11,1;CL:0000182,1.71e-08,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!3.21e-27!5;UBERON:0001003!3.21e-27!5;UBERON:0002097!3.21e-27!5;UBERON:0002199!3.21e-27!5;UBERON:0007029!3.21e-27!5;UBERON:0007376!3.21e-27!5;UBERON:0002416!3.21e-27!5;UBERON:0007383!3.21e-27!5;UBERON:0002107!4.54e-11!22;UBERON:0007499!4.54e-11!22;UBERON:0006925!4.54e-11!22;UBERON:0009497!4.54e-11!22;UBERON:0000015!4.54e-11!22;UBERON:0002423!4.54e-11!22;UBERON:0006235!4.54e-11!22;UBERON:0008835!4.54e-11!22;UBERON:0003894!4.54e-11!22;UBERON:0004161!4.54e-11!22;UBERON:0008836!4.54e-11!22;UBERON:0009854!1.47e-10!23;UBERON:0009856!1.47e-10!23;UBERON:0002365!1.17e-09!25;UBERON:0002330!1.17e-09!25;UBERON:0005057!4.15e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,5.42e-32,5;UBERON:0001003,5.42e-32,5;UBERON:0002097,5.42e-32,5;UBERON:0002199,5.42e-32,5;UBERON:0007029,5.42e-32,5;UBERON:0007376,5.42e-32,5;UBERON:0002416,5.42e-32,5;UBERON:0007383,5.42e-32,5;UBERON:0003102,1.38e-07,22;UBERON:0002107,2.31e-07,22;UBERON:0007499,2.31e-07,22;UBERON:0006925,2.31e-07,22;UBERON:0009497,2.31e-07,22;UBERON:0000015,2.31e-07,22;UBERON:0002423,2.31e-07,22;UBERON:0006235,2.31e-07,22;UBERON:0008835,2.31e-07,22;UBERON:0003894,2.31e-07,22;UBERON:0004161,2.31e-07,22;UBERON:0008836,2.31e-07,22;UBERON:0009854,4.69e-07,23;UBERON:0009856,4.69e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30211938490693,0,1.07940638327563,1.29955283489534,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,5.56131981917928,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.46261131177108,0.807322133479528,8.32318364008551,40.228479929057,31.8433345505419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,3.75005412503176,0 | |||
|short_description=p1@Ces4a | |||
}} |
Revision as of 14:34, 14 September 2013
Short description: | p1@Ces4a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ces4a_5end |
Coexpression cluster: | MCL_coexpression_mm9:25 |
Association with transcript: | 91bp_to_ENSMUST00000057434, ENSMUST00000161289, NM_146213, uc009nbo.1_5end |
EntrezGene: | Ces4a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.58e-11 | 1 |
hepatic stellate cell | 4.58e-11 | 1 |
hepatocyte | 1.71e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 5.42e-32 | 5 |
skin epidermis | 5.42e-32 | 5 |
skin of body | 5.42e-32 | 5 |
integument | 5.42e-32 | 5 |
surface | 5.42e-32 | 5 |
outer epithelium | 5.42e-32 | 5 |
integumental system | 5.42e-32 | 5 |
enveloping layer of ectoderm | 5.42e-32 | 5 |
surface structure | 1.38e-07 | 22 |
liver | 2.31e-07 | 22 |
epithelial sac | 2.31e-07 | 22 |
digestive gland | 2.31e-07 | 22 |
epithelium of foregut-midgut junction | 2.31e-07 | 22 |
anatomical boundary | 2.31e-07 | 22 |
hepatobiliary system | 2.31e-07 | 22 |
foregut-midgut junction | 2.31e-07 | 22 |
hepatic diverticulum | 2.31e-07 | 22 |
liver primordium | 2.31e-07 | 22 |
septum transversum | 2.31e-07 | 22 |
liver bud | 2.31e-07 | 22 |
digestive tract diverticulum | 4.69e-07 | 23 |
sac | 4.69e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.