FFCP PHASE1:Mm9::chr8:96704157..96704191,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=665|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:96704157..96704191,-|id=chr8:96704157..96704191,-|ontology_enrichment_celltype=CL:0000333!6.91e-08!10;CL:0000095!6.91e-08!10;CL:0000243!6.91e-08!10;CL:0000123!6.91e-08!10;CL:0000125!6.91e-08!10;CL:0000030!6.91e-08!10;CL:0000339!6.91e-08!10;CL:0002453!3.95e-07!8|ontology_enrichment_celltype_v019_2=CL:0002453,2.26e-14,8;CL:0000333,1.09e-13,10;CL:0000095,1.09e-13,10;CL:0000243,1.09e-13,10;CL:0000123,1.09e-13,10;CL:0000125,1.09e-13,10;CL:0000030,1.09e-13,10;CL:0000339,1.09e-13,10;CL:0000128,1.84e-11,6;CL:0000126,1.84e-11,6;CL:0000127,1.84e-11,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.62e-09,22;UBERON:0007499,1.62e-09,22;UBERON:0006925,1.62e-09,22;UBERON:0009497,1.62e-09,22;UBERON:0000015,1.62e-09,22;UBERON:0002423,1.62e-09,22;UBERON:0006235,1.62e-09,22;UBERON:0008835,1.62e-09,22;UBERON:0003894,1.62e-09,22;UBERON:0004161,1.62e-09,22;UBERON:0008836,1.62e-09,22;UBERON:0009854,5.82e-09,23;UBERON:0009856,5.82e-09,23;UBERON:0002365,5.43e-08,25;UBERON:0002330,5.43e-08,25|phase1_expression=0,0,0,0,0.500895729946347,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0,0,0.42438965179803,1.19060606211498,0.496454756004426,0,0.159992422793407,0.45881856213434,0,0,0,0.760093677825496,0.252030129759931,0.221730510655305,2.54012269383853,1.23012957516914,0,1.1554064790051,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0.629484089877886,0.709638518536602,0.917733760808408,8.60630478782843,12.8634842264463,22.8473630043851,9.3326351555656,4.19959264876088,7.18762821824858,0,0,0,1.02903774414379,0.573066879877513,2.57836046138721,0,0,0,4.74382344896785,5.33576877666684,0.449949858640699,2.96659908770092,1.4209602298922,2.69640099466564,4.2264013585371,0.207379224616955,0,0.210324961351382,0.285650984403804,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0.383062014255563,0.46081959976873,0,0,0,0.837548997004143,2.8138130501584,0.916789486660861,0.294628585473668,0.427115042397309,0,1.51452386666368,0.906858721281426,0,0,38.7583660213418,0,0.649776417447669,0.896053774194671,0.842666520790511,1.1930122580464,0.779358013808606,0.70667914902068,0.14084341977668,0,0,0,2.38140145112336,2.53359865475099,2.52762222507392,2.8545969929765,0,0.148442139064825,0.520455980298408,0,0.691846491768175,0.60289056221049,0.117588707135705,0.125666591329675,0.741584903203122,0.144599356919912,0,0,0.220841518460394,0,0,0.292780797011547,1.04723353406728,0.255457055208591,0,0,0.254140454146129,0.599162557619291,0,0.125654352112864,0.695297280769106,0.255715457330331,0.62336413367868,0.648965052271031,0,0.124406970610093,0.252722758433675,0,0,0.229902104433473,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568326998791185,0,0,0.180062061461015,0,0,0.617068451549513,0.232533944750408,0.536546802799238,0.583826711835847,0.16455984991348,0,0.243206428637567,0.292399974850665,0,0.134206418760372,0,0.102904612379284,0,0,0,0.464473343720877,0.128867461322093,0.605050573870028,0.22237804384487,0.951128130562796,0.949058123089023,1.64698954724011,2.01068167040216,0.198956472041151,0.19496408711912,0,0.432276099749388,1.39398891278057,0,0.342745537829186,0,0,0.387904974335251,0.280543279561274,0.379419222745544,0,0.31399745568275,0.123397163921801,0.296452627087149,1.33476084572875,1.57247196090562,3.14806957338795,2.43432145666204,2.41177159752417,4.58326533206556,1.15078454980324,1.45921704097532,2.19649130550465,4.31304619582064,1.86070473834252,0,0,0.179397413521912,2.8946611281802,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,1.08781136763742,0.491764273019036,0,0.963303539926752,1.28932855251423,0.327869890753351,0.252470927204373,0.631016438832513,0,0,0,0.222798674082394,0,0,0.292255857911312,0,0,0,0,0.162886959353576,0.164970122972535,0,0.728341908464944,1.209294227859,1.13163047853539,1.47650946440386,1.22974059177571,0.516856586336442,1.45413491791002,1.06949213515416,1.58018378967908,3.16255825724996,0,0,0,0,0,0,0.178368817602071,0.493647061806363,0.913394847343798,2.58138878870081,0.63549621259146,3.52845436887939,0,0,0.0603129249281559,0.596861720015682,0,0.582961673259701,0.927126510052548,0.512612642393558,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0,0.406638934253697,0.648032044930808,0.418176592028937,0,0.674321731924103,0.495920734352016,0.785267825952089,0.648074866458964,0,6.76431526421028,0.149516546043979,0,0.194451188344048,0.258319646955462,0.337912250981556,0,0,0.314578033277133,0.724752362478018,2.88030006257865,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0.680191150845634,0.221985953374065,0.0897138566094757,0,0,1.50145980360946,0.36630324853453,0,2.00628841614145,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,0.685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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=665 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:96704157..96704191,- | |||
|id=chr8:96704157..96704191,- | |||
|ontology_enrichment_celltype=CL:0000333!6.91e-08!10;CL:0000095!6.91e-08!10;CL:0000243!6.91e-08!10;CL:0000123!6.91e-08!10;CL:0000125!6.91e-08!10;CL:0000030!6.91e-08!10;CL:0000339!6.91e-08!10;CL:0002453!3.95e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,2.26e-14,8;CL:0000333,1.09e-13,10;CL:0000095,1.09e-13,10;CL:0000243,1.09e-13,10;CL:0000123,1.09e-13,10;CL:0000125,1.09e-13,10;CL:0000030,1.09e-13,10;CL:0000339,1.09e-13,10;CL:0000128,1.84e-11,6;CL:0000126,1.84e-11,6;CL:0000127,1.84e-11,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.62e-09,22;UBERON:0007499,1.62e-09,22;UBERON:0006925,1.62e-09,22;UBERON:0009497,1.62e-09,22;UBERON:0000015,1.62e-09,22;UBERON:0002423,1.62e-09,22;UBERON:0006235,1.62e-09,22;UBERON:0008835,1.62e-09,22;UBERON:0003894,1.62e-09,22;UBERON:0004161,1.62e-09,22;UBERON:0008836,1.62e-09,22;UBERON:0009854,5.82e-09,23;UBERON:0009856,5.82e-09,23;UBERON:0002365,5.43e-08,25;UBERON:0002330,5.43e-08,25 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0,0,0.42438965179803,1.19060606211498,0.496454756004426,0,0.159992422793407,0.45881856213434,0,0,0,0.760093677825496,0.252030129759931,0.221730510655305,2.54012269383853,1.23012957516914,0,1.1554064790051,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0.629484089877886,0.709638518536602,0.917733760808408,8.60630478782843,12.8634842264463,22.8473630043851,9.3326351555656,4.19959264876088,7.18762821824858,0,0,0,1.02903774414379,0.573066879877513,2.57836046138721,0,0,0,4.74382344896785,5.33576877666684,0.449949858640699,2.96659908770092,1.4209602298922,2.69640099466564,4.2264013585371,0.207379224616955,0,0.210324961351382,0.285650984403804,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0.383062014255563,0.46081959976873,0,0,0,0.837548997004143,2.8138130501584,0.916789486660861,0.294628585473668,0.427115042397309,0,1.51452386666368,0.906858721281426,0,0,38.7583660213418,0,0.649776417447669,0.896053774194671,0.842666520790511,1.1930122580464,0.779358013808606,0.70667914902068,0.14084341977668,0,0,0,2.38140145112336,2.53359865475099,2.52762222507392,2.8545969929765,0,0.148442139064825,0.520455980298408,0,0.691846491768175,0.60289056221049,0.117588707135705,0.125666591329675,0.741584903203122,0.144599356919912,0,0,0.220841518460394,0,0,0.292780797011547,1.04723353406728,0.255457055208591,0,0,0.254140454146129,0.599162557619291,0,0.125654352112864,0.695297280769106,0.255715457330331,0.62336413367868,0.648965052271031,0,0.124406970610093,0.252722758433675,0,0,0.229902104433473,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568326998791185,0,0,0.180062061461015,0,0,0.617068451549513,0.232533944750408,0.536546802799238,0.583826711835847,0.16455984991348,0,0.243206428637567,0.292399974850665,0,0.134206418760372,0,0.102904612379284,0,0,0,0.464473343720877,0.128867461322093,0.605050573870028,0.22237804384487,0.951128130562796,0.949058123089023,1.64698954724011,2.01068167040216,0.198956472041151,0.19496408711912,0,0.432276099749388,1.39398891278057,0,0.342745537829186,0,0,0.387904974335251,0.280543279561274,0.379419222745544,0,0.31399745568275,0.123397163921801,0.296452627087149,1.33476084572875,1.57247196090562,3.14806957338795,2.43432145666204,2.41177159752417,4.58326533206556,1.15078454980324,1.45921704097532,2.19649130550465,4.31304619582064,1.86070473834252,0,0,0.179397413521912,2.8946611281802,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,1.08781136763742,0.491764273019036,0,0.963303539926752,1.28932855251423,0.327869890753351,0.252470927204373,0.631016438832513,0,0,0,0.222798674082394,0,0,0.292255857911312,0,0,0,0,0.162886959353576,0.164970122972535,0,0.728341908464944,1.209294227859,1.13163047853539,1.47650946440386,1.22974059177571,0.516856586336442,1.45413491791002,1.06949213515416,1.58018378967908,3.16255825724996,0,0,0,0,0,0,0.178368817602071,0.493647061806363,0.913394847343798,2.58138878870081,0.63549621259146,3.52845436887939,0,0,0.0603129249281559,0.596861720015682,0,0.582961673259701,0.927126510052548,0.512612642393558,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0,0.406638934253697,0.648032044930808,0.418176592028937,0,0.674321731924103,0.495920734352016,0.785267825952089,0.648074866458964,0,6.76431526421028,0.149516546043979,0,0.194451188344048,0.258319646955462,0.337912250981556,0,0,0.314578033277133,0.724752362478018,2.88030006257865,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0.680191150845634,0.221985953374065,0.0897138566094757,0,0,1.50145980360946,0.36630324853453,0,2.00628841614145,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,0.685082519770642,0,0,0,0.453142408984205,0,0.103787347584177,0,0.512200817262403,0.243106717068294,1.88651846365184,1.10306105070008,0.222246727801615,0.206035057238894,0,0,0,0,0.280924522409647,0.448176066834085,0.229741875822453,0,0.463537303779422,0,0,0.147198920134397,0,0,0,0.290692833264657,0.282328141245992,0.25384382367503,0.182927972872773,0,0,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.467863216890817,0.429742108096597,0.191288332068843,0,0 | |||
|short_description=p@chr8:96704157..96704191,- | |||
}} |
Revision as of 16:30, 14 September 2013
Short description: | p@chr8:96704157..96704191, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:96704157..96704191, - |
Coexpression cluster: | MCL_coexpression_mm9:665 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 2.26e-14 | 8 |
migratory neural crest cell | 1.09e-13 | 10 |
neuron associated cell | 1.09e-13 | 10 |
glial cell (sensu Vertebrata) | 1.09e-13 | 10 |
neuron associated cell (sensu Vertebrata) | 1.09e-13 | 10 |
glial cell | 1.09e-13 | 10 |
glioblast | 1.09e-13 | 10 |
glioblast (sensu Vertebrata) | 1.09e-13 | 10 |
oligodendrocyte | 1.84e-11 | 6 |
macroglial cell | 1.84e-11 | 6 |
astrocyte | 1.84e-11 | 6 |
Ontology term | p-value | n |
---|---|---|
liver | 1.62e-09 | 22 |
epithelial sac | 1.62e-09 | 22 |
digestive gland | 1.62e-09 | 22 |
epithelium of foregut-midgut junction | 1.62e-09 | 22 |
anatomical boundary | 1.62e-09 | 22 |
hepatobiliary system | 1.62e-09 | 22 |
foregut-midgut junction | 1.62e-09 | 22 |
hepatic diverticulum | 1.62e-09 | 22 |
liver primordium | 1.62e-09 | 22 |
septum transversum | 1.62e-09 | 22 |
liver bud | 1.62e-09 | 22 |
digestive tract diverticulum | 5.82e-09 | 23 |
sac | 5.82e-09 | 23 |
exocrine gland | 5.43e-08 | 25 |
exocrine system | 5.43e-08 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.