FFCP PHASE1:Mm9::chr9:42914124..42914179,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=69632|HGNC=|UniProt=F8VQN6,Q8R4H2,Q9D7D6|association_with_transcript=-323bp_to_ENSMUST00000165665,NM_027144,uc009pba.1,uc009pbb.1,uc009pbc.1_5end|description=CAGE_peak_2_at_Arhgef12_5end|id=chr9:42914124..42914179,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!1.64e-12!122;UBERON:0000025!5.99e-10!114;UBERON:0000468!6.83e-08!333;UBERON:0009569!1.08e-07!66;UBERON:0007023!1.95e-07!51;UBERON:0002100!5.10e-07!98;UBERON:0005177!5.78e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.63e-12,122;UBERON:0000025,5.97e-10,114;UBERON:0002100,2.91e-08,90;UBERON:0005177,3.88e-08,79;UBERON:0009569,1.07e-07,66;UBERON:0007023,1.95e-07,51|phase1_expression=8.48788889655408,5.93258192986914,8.64498554840118,6.95667686005709,11.0197060588196,12.0873075776561,11.6806320297763,3.74457637980571,0.563154888606667,0.936258105287974,0.68487187290202,1.03703806693937,0.342401459862411,1.39872643870396,5.99597571268193,5.4668322195253,9.79386629379405,2.05050407482854,0.685572168028694,1.69755860719212,14.3723160355308,0.0992909512008853,0,5.59973479776923,3.44113921600755,8.6134794617253,8.61523992318149,4.95583835177545,2.47030445293286,5.79669298447841,4.8780712344167,7.62036808151557,7.99584223859941,0,8.95440021228951,6.64938581433969,8.98345167554424,0.418531630736908,0,0,0,0.683045484958446,0,13.5968563413623,12.1652317463417,8.25960384727567,6.25913075478431,5.45062890951116,5.05278220289285,9.52706505463989,9.09911740564856,1.43752564364972,0.335565212115473,2.17608642603403,0.336093799142464,11.0621557495457,15.1862723167541,24.2365883370398,4.45096213891115,5.28990979272033,3.1691570175309,6.77689064138264,4.4464739805557,2.6996991518442,1.97773272513395,3.5524005747305,5.09320187881288,8.4528027170742,6.947204024668,4.86021377994086,5.04779907243317,6.28432165688368,6.62605622854841,4.77714116938321,4.79227355091182,4.5960939330501,18.7196997698961,18.2592893461818,13.2101618600369,4.61602007055678,4.11694396210843,3.64639359389732,16.7509799400829,10.1297269805702,13.2934475565825,5.89257170947335,5.97961059356232,5.03278503728312,9.92013132664711,11.9403064968721,19.7107852317141,8.60423876981386,12.9194553404473,23.746940432064,17.5439632710871,18.8171292580881,15.308441794361,7.83979483859066,8.3131521472918,7.42013106471715,9.29566570526091,11.5493829672886,10.1922095882658,7.11066703153331,6.49473123033642,8.36087556067825,5.56076889516262,17.5843174767352,3.36619248741323,29.0946592567057,8.32729568477452,9.13396434936424,11.992005857315,9.79697163592047,16.2272415847273,21.1119873433855,8.89901883843746,22.7020990364261,3.5384422077995,9.05894359705491,10.8212344045593,11.6370060752453,1.86391761218122,16.9812862266697,15.7085030110091,9.45191104271788,0.359445373517761,0,0,19.3229924832221,17.8425235099264,5.90575454930463,22.0756886644191,24.2929684463814,14.5451631191692,16.061885043708,13.7483141197927,11.3210343255185,21.9868799837297,22.0963948680798,6.76626303406059,6.20735681970377,4.68161537493908,5.57607825992146,7.21186891004075,6.40568601424249,9.37017245597288,15.0047955028629,7.32931175971664,11.1572587299013,10.5570674498369,10.0830036916684,14.7365042089567,13.5818344943645,13.9931852757402,13.335295876839,0,0,0,7.45652781127807,8.44293815931946,8.28285482720668,10.180023630164,11.6090896730968,10.9529650150039,9.76642567951713,9.92611585178591,10.7424114977796,15.3040660419537,17.4017511923841,20.8346840532849,20.4679982395465,17.7835593385751,19.4599307202539,16.6129059365661,9.2614151141356,6.27795687669216,9.78467096655114,7.25180051819795,9.75394021813842,6.05677068213839,7.26060688644033,4.89231696458715,6.46767128782701,11.3886974770683,5.10566759644434,6.53471542880701,6.56556357735798,8.77338392036041,5.39291645192533,5.83572734661674,7.36822711041159,6.82804443431094,11.4248512609729,9.01661885384643,11.8117770150282,11.0552917685547,12.3439043006961,15.7458977439401,18.3036583494707,19.9388384358546,17.6457944408175,29.941715335802,4.17112764290235,3.53806191203765,4.04751802292737,6.08580364165509,6.02942899381042,6.11102044275408,8.34318798607351,11.0251954207024,13.7280706594041,17.2521847832825,18.9791883310937,18.0981850406445,25.5104666726583,22.6040741037609,30.8763853672555,25.1264338626582,8.33762211790133,10.5927234687317,10.6939404038369,11.2651319178481,16.4156132292979,19.5195785526531,21.4647012643579,23.1723661836101,19.9318220683897,21.8453033060757,24.2517705779292,20.2041428783098,20.1062191428301,1.50791283939272,3.80733978673097,15.7364567366092,17.1080782708934,20.871576698413,15.7063660033552,6.39346286969034,12.876017287423,10.4117712407365,6.24701990874622,9.47862950024315,12.4263774935327,13.3679204449436,15.0030561318081,11.334699646897,11.6902343164525,9.88219444866309,19.921921618152,22.2845933776982,8.90328018336276,13.845391545054,26.7251599215507,23.8941249011933,5.09839335925461,4.83717691143602,5.09233715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| ||
|EntrezGene=69632 | |||
|HGNC= | |||
|UniProt=F8VQN6,Q8R4H2,Q9D7D6 | |||
|association_with_transcript=-323bp_to_ENSMUST00000165665,NM_027144,uc009pba.1,uc009pbb.1,uc009pbc.1_5end | |||
|description=CAGE_peak_2_at_Arhgef12_5end | |||
|id=chr9:42914124..42914179,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!1.64e-12!122;UBERON:0000025!5.99e-10!114;UBERON:0000468!6.83e-08!333;UBERON:0009569!1.08e-07!66;UBERON:0007023!1.95e-07!51;UBERON:0002100!5.10e-07!98;UBERON:0005177!5.78e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.63e-12,122;UBERON:0000025,5.97e-10,114;UBERON:0002100,2.91e-08,90;UBERON:0005177,3.88e-08,79;UBERON:0009569,1.07e-07,66;UBERON:0007023,1.95e-07,51 | |||
|phase1_expression=8.48788889655408,5.93258192986914,8.64498554840118,6.95667686005709,11.0197060588196,12.0873075776561,11.6806320297763,3.74457637980571,0.563154888606667,0.936258105287974,0.68487187290202,1.03703806693937,0.342401459862411,1.39872643870396,5.99597571268193,5.4668322195253,9.79386629379405,2.05050407482854,0.685572168028694,1.69755860719212,14.3723160355308,0.0992909512008853,0,5.59973479776923,3.44113921600755,8.6134794617253,8.61523992318149,4.95583835177545,2.47030445293286,5.79669298447841,4.8780712344167,7.62036808151557,7.99584223859941,0,8.95440021228951,6.64938581433969,8.98345167554424,0.418531630736908,0,0,0,0.683045484958446,0,13.5968563413623,12.1652317463417,8.25960384727567,6.25913075478431,5.45062890951116,5.05278220289285,9.52706505463989,9.09911740564856,1.43752564364972,0.335565212115473,2.17608642603403,0.336093799142464,11.0621557495457,15.1862723167541,24.2365883370398,4.45096213891115,5.28990979272033,3.1691570175309,6.77689064138264,4.4464739805557,2.6996991518442,1.97773272513395,3.5524005747305,5.09320187881288,8.4528027170742,6.947204024668,4.86021377994086,5.04779907243317,6.28432165688368,6.62605622854841,4.77714116938321,4.79227355091182,4.5960939330501,18.7196997698961,18.2592893461818,13.2101618600369,4.61602007055678,4.11694396210843,3.64639359389732,16.7509799400829,10.1297269805702,13.2934475565825,5.89257170947335,5.97961059356232,5.03278503728312,9.92013132664711,11.9403064968721,19.7107852317141,8.60423876981386,12.9194553404473,23.746940432064,17.5439632710871,18.8171292580881,15.308441794361,7.83979483859066,8.3131521472918,7.42013106471715,9.29566570526091,11.5493829672886,10.1922095882658,7.11066703153331,6.49473123033642,8.36087556067825,5.56076889516262,17.5843174767352,3.36619248741323,29.0946592567057,8.32729568477452,9.13396434936424,11.992005857315,9.79697163592047,16.2272415847273,21.1119873433855,8.89901883843746,22.7020990364261,3.5384422077995,9.05894359705491,10.8212344045593,11.6370060752453,1.86391761218122,16.9812862266697,15.7085030110091,9.45191104271788,0.359445373517761,0,0,19.3229924832221,17.8425235099264,5.90575454930463,22.0756886644191,24.2929684463814,14.5451631191692,16.061885043708,13.7483141197927,11.3210343255185,21.9868799837297,22.0963948680798,6.76626303406059,6.20735681970377,4.68161537493908,5.57607825992146,7.21186891004075,6.40568601424249,9.37017245597288,15.0047955028629,7.32931175971664,11.1572587299013,10.5570674498369,10.0830036916684,14.7365042089567,13.5818344943645,13.9931852757402,13.335295876839,0,0,0,7.45652781127807,8.44293815931946,8.28285482720668,10.180023630164,11.6090896730968,10.9529650150039,9.76642567951713,9.92611585178591,10.7424114977796,15.3040660419537,17.4017511923841,20.8346840532849,20.4679982395465,17.7835593385751,19.4599307202539,16.6129059365661,9.2614151141356,6.27795687669216,9.78467096655114,7.25180051819795,9.75394021813842,6.05677068213839,7.26060688644033,4.89231696458715,6.46767128782701,11.3886974770683,5.10566759644434,6.53471542880701,6.56556357735798,8.77338392036041,5.39291645192533,5.83572734661674,7.36822711041159,6.82804443431094,11.4248512609729,9.01661885384643,11.8117770150282,11.0552917685547,12.3439043006961,15.7458977439401,18.3036583494707,19.9388384358546,17.6457944408175,29.941715335802,4.17112764290235,3.53806191203765,4.04751802292737,6.08580364165509,6.02942899381042,6.11102044275408,8.34318798607351,11.0251954207024,13.7280706594041,17.2521847832825,18.9791883310937,18.0981850406445,25.5104666726583,22.6040741037609,30.8763853672555,25.1264338626582,8.33762211790133,10.5927234687317,10.6939404038369,11.2651319178481,16.4156132292979,19.5195785526531,21.4647012643579,23.1723661836101,19.9318220683897,21.8453033060757,24.2517705779292,20.2041428783098,20.1062191428301,1.50791283939272,3.80733978673097,15.7364567366092,17.1080782708934,20.871576698413,15.7063660033552,6.39346286969034,12.876017287423,10.4117712407365,6.24701990874622,9.47862950024315,12.4263774935327,13.3679204449436,15.0030561318081,11.334699646897,11.6902343164525,9.88219444866309,19.921921618152,22.2845933776982,8.90328018336276,13.845391545054,26.7251599215507,23.8941249011933,5.09839335925461,4.83717691143602,5.09233715340925,3.54362271456927,7.68587869859819,13.1798429515793,11.6330793432802,9.9819265947722,14.8537276229834,26.3546521437497,21.6584640821192,14.6389030474129,7.38250485528372,6.59729287292048,6.00143698088458,12.0591358876746,9.81028496811388,11.6829804627506,7.00269382963578,11.2642419870581,12.2862601101016,21.6117830093863,31.4932743118227,19.6986600569005,17.3701223793089,18.0252239444736,19.8610488691524,9.03590593552537,17.2445530869774,6.32222258952055,8.04908785056568,10.0005044779644,9.41842285023455,6.15124024744613,6.63456702298916,1.01987057996313,1.11961161858926,0.690999869022119,1.90934123603023,6.64305586520384,9.55601495496189,8.7484326065659,8.78170843260769,11.7915784422936,14.4304850631758,16.2000773221658,16.7523802869779,6.99920855775682,19.26151870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| |||
|short_description=p2@Arhgef12 | |||
}} | |||
Revision as of 17:52, 14 September 2013
| Short description: | p2@Arhgef12 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Arhgef12_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -323bp_to_ENSMUST00000165665, NM_027144, uc009pba.1, uc009pbb.1, uc009pbc.1_5end |
| EntrezGene: | Arhgef12 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| anatomical conduit | 1.63e-12 | 122 |
| tube | 5.97e-10 | 114 |
| trunk | 2.91e-08 | 90 |
| trunk region element | 3.88e-08 | 79 |
| subdivision of trunk | 1.07e-07 | 66 |
| adult organism | 1.95e-07 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
