FFCP PHASE1:Mm9::chr9:44581110..44581150,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=76568|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000124534,ENSMUST00000143654_5end|description=CAGE_peak_1_at_Ift46_5end|id=chr9:44581110..44581150,+|ontology_enrichment_celltype=CL:0002321!1.06e-21!70;CL:0000220!1.06e-21!70;CL:0000055!4.65e-19!50;CL:0002319!5.97e-16!43;CL:0000221!7.71e-16!44;CL:0000133!7.71e-16!44;CL:0000393!2.46e-15!39;CL:0000211!2.46e-15!39;CL:0000548!3.23e-12!115;CL:0000004!3.23e-12!115;CL:0000255!3.23e-12!115;CL:0000540!7.94e-12!33;CL:0000047!7.94e-12!33;CL:0000031!7.94e-12!33;CL:0000404!7.94e-12!33;CL:0002371!1.59e-10!118;CL:0000144!1.20e-09!121;CL:0000012!1.20e-09!121;CL:0000117!1.75e-08!23;CL:0000337!1.75e-08!23|ontology_enrichment_celltype_v019_2=CL:0002321,1.06e-21,70;CL:0002319,5.97e-16,43;CL:0000221,7.71e-16,44;CL:0000133,7.71e-16,44;CL:0000393,2.46e-15,39;CL:0000211,2.46e-15,39;CL:0000540,7.94e-12,33;CL:0000047,7.94e-12,33;CL:0000031,7.94e-12,33;CL:0000404,7.94e-12,33;CL:0000117,1.75e-08,23;CL:0000337,1.75e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.27e-08!73;UBERON:0005743!1.27e-08!73;UBERON:0000073!2.12e-08!75;UBERON:0001016!2.12e-08!75|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.27e-08,73;UBERON:0001016,2.12e-08,75|phase1_expression=24.8230713012431,20.9385244583617,20.4749657725291,16.3330674105688,10.0179145989269,12.255186849568,23.3612640595526,9.29687928779349,2.39340827657833,5.85161315804984,0.68487187290202,0.638177271962691,10.2720437958723,10.2281870830227,7.66152452176024,8.09901069559304,6.99561878128147,11.1989068702174,13.4372144933624,6.79023442876848,24.8326407241124,9.73051321768676,8.8807928307238,30.2385679079539,30.5114343819336,18.9496548157957,23.6919097887491,21.1161808032171,29.453630015738,13.8616571367962,17.0732493204585,12.7006134691926,11.6862309641068,0,28.5963103553762,13.6312409193964,19.3960888449251,7.11503772252743,5.4693474116666,2.61761871986899,4.1176204162171,0,0,45.574648107159,45.9237498424401,36.1587101758513,44.5963066278382,45.3492325271329,49.2097049325217,51.1350634565365,47.0354376661218,63.2511283205875,10.4025215755797,10.8804321301702,13.1076581665561,51.4518872071894,47.5645510298336,46.9261603972473,27.9196715986245,43.9062512795787,38.0298842103708,29.1406297579454,59.5827513394463,27.8968912357234,40.543520865246,26.9982443679518,37.1504137042822,71.0803864844876,34.6323305110315,59.1326009892805,38.4894679273029,33.1355141908412,35.3389665522582,29.275301012374,51.7565543498476,74.4567217154117,25.3266526298594,18.8977260366078,16.7431121249305,30.3338461779446,39.7056373234458,36.4639359389732,16.7509799400829,14.6318278608237,18.0301932376636,27.4004584490511,28.4743361598206,32.4335035736023,11.510381386644,20.6310359091524,21.7398366526258,13.7667820317022,19.039197343817,51.2718032055926,19.4932925234301,28.6737207742295,24.0159958425296,42.7780109670925,39.4874726996361,30.7405429823996,17.6054274720851,50.047326191584,35.6727335589304,21.3320010945999,24.4634876342672,22.5490280272838,22.2430755806505,28.8885215689222,9.06282592765101,18.5552673831031,17.868988656912,26.4884966131563,21.2166257475574,22.759118723446,24.693628498498,14.0746582289237,22.0003521283593,19.2317144703483,3.5384422077995,8.25010934731787,6.40440403535141,5.33362778448744,11.1835056730873,7.31951992528868,11.7290155815535,9.96282515313506,17.4930081778644,14.9975682748352,14.7401463404755,10.9347166765521,6.8625090422794,9.92669381691629,7.12679712788333,7.67146371990992,16.6230435647648,11.356888414743,23.1175355940218,13.6847667671102,32.0957903210767,11.3638602178696,13.6626465110839,13.104419952708,16.5657159420921,11.1521565198429,14.6278473175355,14.3487366719032,10.9631017734883,7.76110112217047,20.0478233427543,19.6670323374532,19.0027214097065,16.001288467213,17.5169767012127,18.4573648256748,16.6683530490434,15.325638545024,12.6398373716382,12.8673953557358,9.09323198065896,12.0132948070591,13.1334593589414,11.1638478105829,14.678173606283,11.4123254413494,14.5011086114136,10.4640275137684,11.5357562601836,14.0118410840603,7.24063339619314,9.68588038066662,9.32291309777341,8.77199924551994,9.00155472693308,9.12603647570528,11.3556572224629,18.8315440654091,11.5646574044329,10.3135720998782,15.1434657880016,15.0953836709285,15.9795652039396,11.4959609035305,11.3412802360884,9.3210556795154,8.0669940462567,15.811099653505,14.0747716928151,13.7279965708394,13.2575579241002,10.7858329038507,13.6166971421057,17.922714592893,33.5712184686955,17.2515254040691,23.6686244913469,19.1432248174595,18.0375813065892,15.0792012764185,14.4179304643307,12.1040321343274,14.4438829614065,17.3990001129739,15.1190839814446,6.50695912292767,5.50365186316968,6.97072548393047,6.8972441272091,6.02942899381042,7.89340140522401,11.7955416354832,15.4028465436284,11.5315793538994,23.0029130443767,13.3970741160661,9.67316786655138,8.84026072814891,16.1457672169721,20.2626278972614,23.4636551511588,15.3488043534093,19.3928321966011,14.9375675482166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| ||
|EntrezGene=76568 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000124534,ENSMUST00000143654_5end | |||
|description=CAGE_peak_1_at_Ift46_5end | |||
|id=chr9:44581110..44581150,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.06e-21!70;CL:0000220!1.06e-21!70;CL:0000055!4.65e-19!50;CL:0002319!5.97e-16!43;CL:0000221!7.71e-16!44;CL:0000133!7.71e-16!44;CL:0000393!2.46e-15!39;CL:0000211!2.46e-15!39;CL:0000548!3.23e-12!115;CL:0000004!3.23e-12!115;CL:0000255!3.23e-12!115;CL:0000540!7.94e-12!33;CL:0000047!7.94e-12!33;CL:0000031!7.94e-12!33;CL:0000404!7.94e-12!33;CL:0002371!1.59e-10!118;CL:0000144!1.20e-09!121;CL:0000012!1.20e-09!121;CL:0000117!1.75e-08!23;CL:0000337!1.75e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.06e-21,70;CL:0002319,5.97e-16,43;CL:0000221,7.71e-16,44;CL:0000133,7.71e-16,44;CL:0000393,2.46e-15,39;CL:0000211,2.46e-15,39;CL:0000540,7.94e-12,33;CL:0000047,7.94e-12,33;CL:0000031,7.94e-12,33;CL:0000404,7.94e-12,33;CL:0000117,1.75e-08,23;CL:0000337,1.75e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.27e-08!73;UBERON:0005743!1.27e-08!73;UBERON:0000073!2.12e-08!75;UBERON:0001016!2.12e-08!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.27e-08,73;UBERON:0001016,2.12e-08,75 | |||
|phase1_expression=24.8230713012431,20.9385244583617,20.4749657725291,16.3330674105688,10.0179145989269,12.255186849568,23.3612640595526,9.29687928779349,2.39340827657833,5.85161315804984,0.68487187290202,0.638177271962691,10.2720437958723,10.2281870830227,7.66152452176024,8.09901069559304,6.99561878128147,11.1989068702174,13.4372144933624,6.79023442876848,24.8326407241124,9.73051321768676,8.8807928307238,30.2385679079539,30.5114343819336,18.9496548157957,23.6919097887491,21.1161808032171,29.453630015738,13.8616571367962,17.0732493204585,12.7006134691926,11.6862309641068,0,28.5963103553762,13.6312409193964,19.3960888449251,7.11503772252743,5.4693474116666,2.61761871986899,4.1176204162171,0,0,45.574648107159,45.9237498424401,36.1587101758513,44.5963066278382,45.3492325271329,49.2097049325217,51.1350634565365,47.0354376661218,63.2511283205875,10.4025215755797,10.8804321301702,13.1076581665561,51.4518872071894,47.5645510298336,46.9261603972473,27.9196715986245,43.9062512795787,38.0298842103708,29.1406297579454,59.5827513394463,27.8968912357234,40.543520865246,26.9982443679518,37.1504137042822,71.0803864844876,34.6323305110315,59.1326009892805,38.4894679273029,33.1355141908412,35.3389665522582,29.275301012374,51.7565543498476,74.4567217154117,25.3266526298594,18.8977260366078,16.7431121249305,30.3338461779446,39.7056373234458,36.4639359389732,16.7509799400829,14.6318278608237,18.0301932376636,27.4004584490511,28.4743361598206,32.4335035736023,11.510381386644,20.6310359091524,21.7398366526258,13.7667820317022,19.039197343817,51.2718032055926,19.4932925234301,28.6737207742295,24.0159958425296,42.7780109670925,39.4874726996361,30.7405429823996,17.6054274720851,50.047326191584,35.6727335589304,21.3320010945999,24.4634876342672,22.5490280272838,22.2430755806505,28.8885215689222,9.06282592765101,18.5552673831031,17.868988656912,26.4884966131563,21.2166257475574,22.759118723446,24.693628498498,14.0746582289237,22.0003521283593,19.2317144703483,3.5384422077995,8.25010934731787,6.40440403535141,5.33362778448744,11.1835056730873,7.31951992528868,11.7290155815535,9.96282515313506,17.4930081778644,14.9975682748352,14.7401463404755,10.9347166765521,6.8625090422794,9.92669381691629,7.12679712788333,7.67146371990992,16.6230435647648,11.356888414743,23.1175355940218,13.6847667671102,32.0957903210767,11.3638602178696,13.6626465110839,13.104419952708,16.5657159420921,11.1521565198429,14.6278473175355,14.3487366719032,10.9631017734883,7.76110112217047,20.0478233427543,19.6670323374532,19.0027214097065,16.001288467213,17.5169767012127,18.4573648256748,16.6683530490434,15.325638545024,12.6398373716382,12.8673953557358,9.09323198065896,12.0132948070591,13.1334593589414,11.1638478105829,14.678173606283,11.4123254413494,14.5011086114136,10.4640275137684,11.5357562601836,14.0118410840603,7.24063339619314,9.68588038066662,9.32291309777341,8.77199924551994,9.00155472693308,9.12603647570528,11.3556572224629,18.8315440654091,11.5646574044329,10.3135720998782,15.1434657880016,15.0953836709285,15.9795652039396,11.4959609035305,11.3412802360884,9.3210556795154,8.0669940462567,15.811099653505,14.0747716928151,13.7279965708394,13.2575579241002,10.7858329038507,13.6166971421057,17.922714592893,33.5712184686955,17.2515254040691,23.6686244913469,19.1432248174595,18.0375813065892,15.0792012764185,14.4179304643307,12.1040321343274,14.4438829614065,17.3990001129739,15.1190839814446,6.50695912292767,5.50365186316968,6.97072548393047,6.8972441272091,6.02942899381042,7.89340140522401,11.7955416354832,15.4028465436284,11.5315793538994,23.0029130443767,13.3970741160661,9.67316786655138,8.84026072814891,16.1457672169721,20.2626278972614,23.4636551511588,15.3488043534093,19.3928321966011,14.9375675482166,19.7139808562342,27.8060387353414,28.3271932654356,19.7084984336377,22.0689201748667,24.8040452406628,13.2347457985714,18.0249646187312,14.1601685130034,25.8921814860906,55.7927750575307,22.8440387203858,12.7858710984949,15.452457793065,13.0045977890111,14.417037450841,20.4918681720844,15.1482556322624,27.1337068697981,33.1872932652143,39.4224817851022,22.7020358054924,23.171062104569,19.5322806244294,30.765613327292,40.0390525338497,31.6230222357219,9.3183181762324,21.149072696032,22.4362660620742,20.6866438379042,31.6742636107268,18.5843193675948,16.2663026223838,11.7906187216253,16.9744571780308,15.9463022155617,19.0609791725235,19.1236936944484,14.9048829085777,17.8248689192361,15.485801138855,17.9211634577498,13.4076206222643,37.1079170271629,14.5849486165361,21.60290019172,13.5032332069903,25.8916741117719,26.0418473699023,17.6067452044269,33.4911444026059,13.6109590676952,29.0209937083434,39.2540548537832,16.3237390412065,32.6158141925729,10.7960135621399,12.0566067443168,8.69946768648825,7.57850175237612,17.9862542950194,4.44264290074417,12.5895989457566,11.8524497516615,10.1718966782533,4.51090951479383,5.0331198105435,14.10820968949,11.6159705428636,9.67399816630967,31.5041303944987,21.3526795667266,18.7053909756701,12.4206141945071,16.30888708912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| |||
|short_description=p1@Ift46 | |||
}} |
Revision as of 17:57, 14 September 2013
Short description: | p1@Ift46 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ift46_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000124534, ENSMUST00000143654_5end |
EntrezGene: | Ift46 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.06e-21 | 70 |
neural cell | 5.97e-16 | 43 |
ectodermal cell | 7.71e-16 | 44 |
neurectodermal cell | 7.71e-16 | 44 |
electrically responsive cell | 2.46e-15 | 39 |
electrically active cell | 2.46e-15 | 39 |
neuron | 7.94e-12 | 33 |
neuronal stem cell | 7.94e-12 | 33 |
neuroblast | 7.94e-12 | 33 |
electrically signaling cell | 7.94e-12 | 33 |
CNS neuron (sensu Vertebrata) | 1.75e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.75e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.27e-08 | 73 |
nervous system | 2.12e-08 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.