FFCP PHASE1:Mm9::chr9:46050881..46050891,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=615|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:46050881..46050891,-|id=chr9:46050881..46050891,-|ontology_enrichment_celltype=CL:0000239!9.30e-11!6;CL:0000677!9.30e-11!6;CL:0000212!9.30e-11!6;CL:0000584!9.30e-11!6;CL:0000075!3.60e-09!7;CL:0000473!5.12e-09!3;CL:0000627!5.12e-09!3;CL:0000682!5.12e-09!3;CL:0002563!4.76e-07!9;CL:0002251!4.76e-07!9;CL:0000066!4.81e-07!25|ontology_enrichment_celltype_v019_2=CL:0000682,3.06e-18,3;CL:0000239,3.97e-09,6;CL:0000677,3.97e-09,6;CL:0000584,3.97e-09,6;CL:0000473,3.85e-08,7;CL:0000066,5.21e-08,25;CL:0000075,6.73e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.05e-22!43;UBERON:0000344!4.81e-19!15;UBERON:0005409!4.05e-18!59;UBERON:0001242!2.29e-14!13;UBERON:0000060!2.29e-14!13;UBERON:0001262!2.29e-14!13;UBERON:0004786!2.29e-14!13;UBERON:0004923!4.90e-11!24;UBERON:0001007!5.97e-10!128;UBERON:0001555!5.97e-10!128;UBERON:0007026!5.97e-10!128;UBERON:0004119!1.06e-09!130;UBERON:0000925!1.06e-09!130;UBERON:0006595!1.06e-09!130;UBERON:0004921!4.03e-08!126;UBERON:0004185!4.03e-08!126;UBERON:0000331!1.03e-07!3;UBERON:0002116!1.03e-07!3;UBERON:0001204!1.03e-07!3;UBERON:0001168!1.03e-07!3;UBERON:0003350!4.76e-07!9;UBERON:0004808!4.76e-07!9;UBERON:0001277!4.76e-07!9;UBERON:0001962!6.66e-07!2;UBERON:0001961!6.66e-07!2;UBERON:0001744!6.66e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.85e-18,31;UBERON:0000344,8.43e-14,15;UBERON:0001962,1.59e-13,2;UBERON:0001961,1.59e-13,2;UBERON:0001744,1.59e-13,2;UBERON:0005409,2.66e-11,47;UBERON:0002465,2.59e-09,3;UBERON:0004923,1.70e-08,24;UBERON:0003199,1.20e-07,1;UBERON:0001242,2.96e-07,13;UBERON:0001262,2.96e-07,13;UBERON:0004786,2.96e-07,13|phase1_expression=0,0.348975407639361,3.63999391511629,1.20985684522732,0.500895729946347,0,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.15961356246374,22.7115188256498,6.31655160526522,2.15380998079537,1.939241094173,0.190023419456374,0.252030129759931,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,0.264450566663544,0,0,0,0,0,0.190225626112559,0.949058123089023,10.7054320570607,8.04272668160862,2.18852119245266,4.28920991662064,0.898819408654221,1.51296634912286,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823684239564244,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr9:46050881..46050891,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=615 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:46050881..46050891,- | |||
|id=chr9:46050881..46050891,- | |||
|ontology_enrichment_celltype=CL:0000239!9.30e-11!6;CL:0000677!9.30e-11!6;CL:0000212!9.30e-11!6;CL:0000584!9.30e-11!6;CL:0000075!3.60e-09!7;CL:0000473!5.12e-09!3;CL:0000627!5.12e-09!3;CL:0000682!5.12e-09!3;CL:0002563!4.76e-07!9;CL:0002251!4.76e-07!9;CL:0000066!4.81e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,3.06e-18,3;CL:0000239,3.97e-09,6;CL:0000677,3.97e-09,6;CL:0000584,3.97e-09,6;CL:0000473,3.85e-08,7;CL:0000066,5.21e-08,25;CL:0000075,6.73e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.05e-22!43;UBERON:0000344!4.81e-19!15;UBERON:0005409!4.05e-18!59;UBERON:0001242!2.29e-14!13;UBERON:0000060!2.29e-14!13;UBERON:0001262!2.29e-14!13;UBERON:0004786!2.29e-14!13;UBERON:0004923!4.90e-11!24;UBERON:0001007!5.97e-10!128;UBERON:0001555!5.97e-10!128;UBERON:0007026!5.97e-10!128;UBERON:0004119!1.06e-09!130;UBERON:0000925!1.06e-09!130;UBERON:0006595!1.06e-09!130;UBERON:0004921!4.03e-08!126;UBERON:0004185!4.03e-08!126;UBERON:0000331!1.03e-07!3;UBERON:0002116!1.03e-07!3;UBERON:0001204!1.03e-07!3;UBERON:0001168!1.03e-07!3;UBERON:0003350!4.76e-07!9;UBERON:0004808!4.76e-07!9;UBERON:0001277!4.76e-07!9;UBERON:0001962!6.66e-07!2;UBERON:0001961!6.66e-07!2;UBERON:0001744!6.66e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.85e-18,31;UBERON:0000344,8.43e-14,15;UBERON:0001962,1.59e-13,2;UBERON:0001961,1.59e-13,2;UBERON:0001744,1.59e-13,2;UBERON:0005409,2.66e-11,47;UBERON:0002465,2.59e-09,3;UBERON:0004923,1.70e-08,24;UBERON:0003199,1.20e-07,1;UBERON:0001242,2.96e-07,13;UBERON:0001262,2.96e-07,13;UBERON:0004786,2.96e-07,13 | |||
|phase1_expression=0,0.348975407639361,3.63999391511629,1.20985684522732,0.500895729946347,0,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.15961356246374,22.7115188256498,6.31655160526522,2.15380998079537,1.939241094173,0.190023419456374,0.252030129759931,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,0.264450566663544,0,0,0,0,0,0.190225626112559,0.949058123089023,10.7054320570607,8.04272668160862,2.18852119245266,4.28920991662064,0.898819408654221,1.51296634912286,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823684239564244,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:46050881..46050891,- | |||
}} |
Revision as of 18:04, 14 September 2013
Short description: | p@chr9:46050881..46050891, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:46050881..46050891, - |
Coexpression cluster: | MCL_coexpression_mm9:615 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 3.06e-18 | 3 |
brush border epithelial cell | 3.97e-09 | 6 |
gut absorptive cell | 3.97e-09 | 6 |
enterocyte | 3.97e-09 | 6 |
defensive cell | 3.85e-08 | 7 |
epithelial cell | 5.21e-08 | 25 |
columnar/cuboidal epithelial cell | 6.73e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.85e-18 | 31 |
mucosa | 8.43e-14 | 15 |
gut-associated lymphoid tissue | 1.59e-13 | 2 |
mucosa-associated lymphoid tissue | 1.59e-13 | 2 |
lymphoid tissue | 1.59e-13 | 2 |
gastrointestinal system | 2.66e-11 | 47 |
lymphoid system | 2.59e-09 | 3 |
organ component layer | 1.70e-08 | 24 |
egg chamber | 1.20e-07 | 1 |
intestinal mucosa | 2.96e-07 | 13 |
wall of intestine | 2.96e-07 | 13 |
gastrointestinal system mucosa | 2.96e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.