Personal tools

FFCP PHASE1:Mm9::chr9:53344833..53344852,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=11920|HGNC=|UniProt=Q62388|association_with_transcript=0bp_to_ENSMUST00000118282_5end|description=CAGE_peak_2_at_Atm_5end|id=chr9:53344833..53344852,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000466!3.65e-09!79;UBERON:0001048!8.84e-08!147;UBERON:0000464!1.35e-07!57;UBERON:0002553!6.80e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.92e-08,79;UBERON:0002553,6.03e-07,39|phase1_expression=2.08193501236232,0.348975407639361,0,0,0,0.671517087647559,1.63528848416868,2.96983643915625,0.84473233291,0.936258105287974,2.56826952338257,2.31339261086476,2.56801094896809,2.18551006047494,2.33176833270964,3.03712901084739,3.49780939064073,6.30924330716475,5.21034847701807,3.39511721438424,2.04103896362567,0.297872853602656,2.08959831311148,1.11994695955385,1.14704640533585,0,0.430761996159075,0.215471232685889,1.71021077510736,1.00812051903972,0.221730510655305,2.54012269383853,1.23012957516914,15.8481681015439,3.75507105676657,0.664938581433969,3.06254034393554,0,0,0.523523743973798,0,0,0,2.7697299954627,2.43304634926835,1.83546752161682,0,0,0,0.194429899074283,0.139986421625363,0,3.35565212115473,1.45072428402269,3.02484419228218,0.514518872071894,2.29226751951005,0.515672092277442,0.202316460859598,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0,1.24427534770173,0.405017814995072,1.05162480675691,0,0.662605622854841,0.489963196859816,0.479227355091182,0,1.10115880999389,2.29837208553338,2.30409799884365,0.131886287730194,0.182975287204819,0,1.95428099300967,2.8138130501584,2.44477196442896,1.17851434189467,1.13897344639282,0.372798891650601,1.51452386666368,2.11600368298999,4.34796733052517,3.44169550792555,0,2.15881276655127,5.19821133958135,5.82434953226536,3.23022166303029,0.681721290312231,0,0.70667914902068,1.26759077799012,0,0,0,0.649473123033642,1.26679932737549,0,3.53970027129086,6.73238497482646,2.82040064223167,0.867426633830679,0.913396434936424,0.691846491768175,1.95939432718409,3.41007250693544,1.88499886994513,0.988779870937496,4.48258006451726,0.884610551949874,1.45590164952668,2.87093973998512,0.969750506270444,3.72783522436244,6.44117753425404,7.12118803165747,0.510914110417183,0.479260498023681,1.19980546198682,0.762421362438388,3.89455662452539,2.28750301409313,0.753926112677186,3.47648640384553,2.81287003063364,2.28566849015516,4.38051410282946,3.25885964321012,1.99051152976149,5.81262344397452,2.73574412652416,3.6433724029557,2.75882525320168,2.88099407688559,5.57607825992146,5.91917542616552,6.27757229395764,4.8724896771059,4.39795730256327,0.646703978798527,2.45837904218165,2.28736461413134,1.7535658594206,4.17070873838397,2.089512999133,2.26360350048738,1.39323986772945,0,0.257347907114715,1.42081749697796,1.03562886267751,1.87620847984877,1.98068267607116,3.31442629819294,1.57411385397923,2.77680803197281,1.86027155800326,2.68273401399619,4.55384835231961,1.97471819896177,4.10418660197738,4.29664690593035,5.55559952216263,5.92785311285837,7.51555945058082,2.94405927989778,1.3377599609307,1.65209391491899,1.85115396664481,3.41261200856374,4.18026009348789,2.83508414908605,2.62188582010345,1.55664630691409,1.71203063501303,1.89811624617805,1.64698954724011,4.27269854960458,4.77495532898762,2.33956904542944,0,0.648414149624083,1.99141273254367,1.13800740571849,2.62771579002376,6.76246414038483,4.2766778847516,4.07300223052014,4.1380133735288,3.41477300470989,4.57591458736767,4.39596437955849,3.70191491765402,6.22550516883013,1.83529616287703,1.96558995113203,1.79889689907883,1.62288097110802,3.13530307678142,1.01850340712568,2.5892652370573,2.2698931748505,2.19649130550465,1.43768206527355,6.69853705803306,2.80833905803104,4.04126204715379,3.40855085691633,6.75420929908714,4.61882975416512,3.03186258832776,4.07412441105065,3.90413697282933,3.05097322775053,3.01511263395268,2.38043640886014,1.75620283072019,3.94087860265477,3.10050565508285,4.9430978283821,1.96635977658886,2.93564469172023,4.62876987460837,0,0.54390568381871,1.47529281905711,1.10374698521893,3.21101179975584,3.28192722458169,0.819674726883377,3.53459298086122,1.57754109708128,1.56175497718655,1.72338718186239,1.19484398976276,2.22798674082394,0.849229592366497,0.404810701674894,1.16902343164525,1.18586333383957,2.57057053137446,3.54850213020672,1.6025904330053,4.72372182125371,4.61916344323099,5.30980553359851,4.37005145078967,3.93020624054176,2.64047111658257,1.47650946440386,2.15204603560749,3.10113951801865,3.99887102425256,3.56497378384721,2.52829406348653,4.21674434299995,4.12542172992747,6.80879211507576,2.52085531643834,0.388076051348264,1.50035924522115,3.01478397191865,2.85390108163313,1.97458824722545,0.608929898229199,1.87737366450968,0.847328283455281,2.42581237860458,2.63818004706368,2.09903754704677,3.01564624640779,2.14870219205646,1.47726809770555,1.7488850197791,3.33765543618917,2.22132145037209,2.06386867963222,2.59272338317596,1.69531611304222,3.14396723758358,3.66045077130436,1.35982743995084,1.6794174278839,1.24379976423981,0,2.21435195506795,2.43983360552218,3.78018692876304,2.29997125615916,2.40198820120795,2.29269388854195,2.89287095038676,2.09404753587224,2.07383957266869,3.72803587852155,3.94585057078933,3.58839710505549,1.65458490457098,2.72231663681667,1.93739735216597,2.53434188236167,3.99014611395563,4.29674469985035,7.96931017635402,5.55643477899814,3.74439008135225,1.26404448251271,1.82452693761148,2.36235201479103,2.46849563657811,2.14832034800978,1.98681354781265,1.32214994471966,1.77227432609493,1.81739609906666,1.5241361331,1.71404514732629,1.75424185331554,1.92423683280659,2.68816875017609,3.85441652145859,2.44184548711471,1.43542170575161,1.84673078000486,5.60249822693352,2.43987218086537,3.29672923681077,2.78678892802786,3.00943262421218,1.12950368523413,3.68260189205742,4.01026859407578,0.859265911718438,7.53590771747707,1.5107877947794,2.70009000092722,3.15224842256954,2.26571204492102,0.51776031175182,2.38710899443606,1.19707462020309,2.04880326904961,1.45864030240976,1.25767897576789,0.919217542250071,2.44471400581777,1.85431551515005,0.962757628775446,2.27427490587418,4.05566879824384,2.07488975524684,2.34103768674706,1.85672941974121,1.7230640686684,2.38146845641537,1.97003354106254,2.31491064556446,2.88460130562315,1.61918812147837,2.05721551431249,1.24233064311536,4.05341522910446,2.76158191601424,2.4468438907986,1.86152137361688,1.46342378298218,1.57841826862706,2.98769050460896,2.80571135828869,2.49133538060766,2.26560309463796,2.45538625901814,3.09873682371932,1.92906610981141,0.749431733813838,2.8071793013449,3.65280791882107,2.48674831689496,2.64709702943419,3.2461496986859|short_description=p2@Atm}}
|EntrezGene=11920
|HGNC=
|UniProt=Q62388
|association_with_transcript=0bp_to_ENSMUST00000118282_5end
|description=CAGE_peak_2_at_Atm_5end
|id=chr9:53344833..53344852,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000466!3.65e-09!79;UBERON:0001048!8.84e-08!147;UBERON:0000464!1.35e-07!57;UBERON:0002553!6.80e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.92e-08,79;UBERON:0002553,6.03e-07,39
|phase1_expression=2.08193501236232,0.348975407639361,0,0,0,0.671517087647559,1.63528848416868,2.96983643915625,0.84473233291,0.936258105287974,2.56826952338257,2.31339261086476,2.56801094896809,2.18551006047494,2.33176833270964,3.03712901084739,3.49780939064073,6.30924330716475,5.21034847701807,3.39511721438424,2.04103896362567,0.297872853602656,2.08959831311148,1.11994695955385,1.14704640533585,0,0.430761996159075,0.215471232685889,1.71021077510736,1.00812051903972,0.221730510655305,2.54012269383853,1.23012957516914,15.8481681015439,3.75507105676657,0.664938581433969,3.06254034393554,0,0,0.523523743973798,0,0,0,2.7697299954627,2.43304634926835,1.83546752161682,0,0,0,0.194429899074283,0.139986421625363,0,3.35565212115473,1.45072428402269,3.02484419228218,0.514518872071894,2.29226751951005,0.515672092277442,0.202316460859598,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0,1.24427534770173,0.405017814995072,1.05162480675691,0,0.662605622854841,0.489963196859816,0.479227355091182,0,1.10115880999389,2.29837208553338,2.30409799884365,0.131886287730194,0.182975287204819,0,1.95428099300967,2.8138130501584,2.44477196442896,1.17851434189467,1.13897344639282,0.372798891650601,1.51452386666368,2.11600368298999,4.34796733052517,3.44169550792555,0,2.15881276655127,5.19821133958135,5.82434953226536,3.23022166303029,0.681721290312231,0,0.70667914902068,1.26759077799012,0,0,0,0.649473123033642,1.26679932737549,0,3.53970027129086,6.73238497482646,2.82040064223167,0.867426633830679,0.913396434936424,0.691846491768175,1.95939432718409,3.41007250693544,1.88499886994513,0.988779870937496,4.48258006451726,0.884610551949874,1.45590164952668,2.87093973998512,0.969750506270444,3.72783522436244,6.44117753425404,7.12118803165747,0.510914110417183,0.479260498023681,1.19980546198682,0.762421362438388,3.89455662452539,2.28750301409313,0.753926112677186,3.47648640384553,2.81287003063364,2.28566849015516,4.38051410282946,3.25885964321012,1.99051152976149,5.81262344397452,2.73574412652416,3.6433724029557,2.75882525320168,2.88099407688559,5.57607825992146,5.91917542616552,6.27757229395764,4.8724896771059,4.39795730256327,0.646703978798527,2.45837904218165,2.28736461413134,1.7535658594206,4.17070873838397,2.089512999133,2.26360350048738,1.39323986772945,0,0.257347907114715,1.42081749697796,1.03562886267751,1.87620847984877,1.98068267607116,3.31442629819294,1.57411385397923,2.77680803197281,1.86027155800326,2.68273401399619,4.55384835231961,1.97471819896177,4.10418660197738,4.29664690593035,5.55559952216263,5.92785311285837,7.51555945058082,2.94405927989778,1.3377599609307,1.65209391491899,1.85115396664481,3.41261200856374,4.18026009348789,2.83508414908605,2.62188582010345,1.55664630691409,1.71203063501303,1.89811624617805,1.64698954724011,4.27269854960458,4.77495532898762,2.33956904542944,0,0.648414149624083,1.99141273254367,1.13800740571849,2.62771579002376,6.76246414038483,4.2766778847516,4.07300223052014,4.1380133735288,3.41477300470989,4.57591458736767,4.39596437955849,3.70191491765402,6.22550516883013,1.83529616287703,1.96558995113203,1.79889689907883,1.62288097110802,3.13530307678142,1.01850340712568,2.5892652370573,2.2698931748505,2.19649130550465,1.43768206527355,6.69853705803306,2.80833905803104,4.04126204715379,3.40855085691633,6.75420929908714,4.61882975416512,3.03186258832776,4.07412441105065,3.90413697282933,3.05097322775053,3.01511263395268,2.38043640886014,1.75620283072019,3.94087860265477,3.10050565508285,4.9430978283821,1.96635977658886,2.93564469172023,4.62876987460837,0,0.54390568381871,1.47529281905711,1.10374698521893,3.21101179975584,3.28192722458169,0.819674726883377,3.53459298086122,1.57754109708128,1.56175497718655,1.72338718186239,1.19484398976276,2.22798674082394,0.849229592366497,0.404810701674894,1.16902343164525,1.18586333383957,2.57057053137446,3.54850213020672,1.6025904330053,4.72372182125371,4.61916344323099,5.30980553359851,4.37005145078967,3.93020624054176,2.64047111658257,1.47650946440386,2.15204603560749,3.10113951801865,3.99887102425256,3.56497378384721,2.52829406348653,4.21674434299995,4.12542172992747,6.80879211507576,2.52085531643834,0.388076051348264,1.50035924522115,3.01478397191865,2.85390108163313,1.97458824722545,0.608929898229199,1.87737366450968,0.847328283455281,2.42581237860458,2.63818004706368,2.09903754704677,3.01564624640779,2.14870219205646,1.47726809770555,1.7488850197791,3.33765543618917,2.22132145037209,2.06386867963222,2.59272338317596,1.69531611304222,3.14396723758358,3.66045077130436,1.35982743995084,1.6794174278839,1.24379976423981,0,2.21435195506795,2.43983360552218,3.78018692876304,2.29997125615916,2.40198820120795,2.29269388854195,2.89287095038676,2.09404753587224,2.07383957266869,3.72803587852155,3.94585057078933,3.58839710505549,1.65458490457098,2.72231663681667,1.93739735216597,2.53434188236167,3.99014611395563,4.29674469985035,7.96931017635402,5.55643477899814,3.74439008135225,1.26404448251271,1.82452693761148,2.36235201479103,2.46849563657811,2.14832034800978,1.98681354781265,1.32214994471966,1.77227432609493,1.81739609906666,1.5241361331,1.71404514732629,1.75424185331554,1.92423683280659,2.68816875017609,3.85441652145859,2.44184548711471,1.43542170575161,1.84673078000486,5.60249822693352,2.43987218086537,3.29672923681077,2.78678892802786,3.00943262421218,1.12950368523413,3.68260189205742,4.01026859407578,0.859265911718438,7.53590771747707,1.5107877947794,2.70009000092722,3.15224842256954,2.26571204492102,0.51776031175182,2.38710899443606,1.19707462020309,2.04880326904961,1.45864030240976,1.25767897576789,0.919217542250071,2.44471400581777,1.85431551515005,0.962757628775446,2.27427490587418,4.05566879824384,2.07488975524684,2.34103768674706,1.85672941974121,1.7230640686684,2.38146845641537,1.97003354106254,2.31491064556446,2.88460130562315,1.61918812147837,2.05721551431249,1.24233064311536,4.05341522910446,2.76158191601424,2.4468438907986,1.86152137361688,1.46342378298218,1.57841826862706,2.98769050460896,2.80571135828869,2.49133538060766,2.26560309463796,2.45538625901814,3.09873682371932,1.92906610981141,0.749431733813838,2.8071793013449,3.65280791882107,2.48674831689496,2.64709702943419,3.2461496986859
|short_description=p2@Atm
}}

Revision as of 18:13, 14 September 2013

Short description:p2@Atm
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Atm_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000118282_5end
EntrezGene:Atm
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Atm

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.31
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.19
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.21
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.43
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D91.51
Mouse Schwann, donor2.CNhs12573.11746-123F92.12
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.54
accessory axillary lymph node, adult.CNhs10475.1063-29H96.73
adrenal gland, adult.CNhs10508.49-24D72.82
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C13.41
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H14.48
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A62.87
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B26.44
cerebellum, neonate N30.CNhs11135.1395-42I27.12
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A43.89
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.26
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B25.81
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C63.64
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D45.58
eyeball, neonate N00.CNhs11207.633-15C65.92
eyeball, neonate N01.CNhs11140.1532-43E76.28
eyeball, neonate N02.CNhs11205.1551-44G84.87
eyeball, neonate N16.CNhs11188.777-19A24.40
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D43.31
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C62.78
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E34.55
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G14.10
heart, neonate N16.CNhs11209.782-15G14.30
heart, neonate N20.CNhs11127.821-26I65.56
heart, neonate N25.CNhs11196.1351-25D35.93
heart, neonate N30.CNhs11202.1390-42D27.52
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D54.18
intestine, embryo E15.CNhs10602.976-16D82.84
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B84.27
intestine, neonate N07.CNhs11095.720-20F24.77
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F82.63
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I24.28
kidney, embryo E18.CNhs11001.1288-20C74.07
kidney, neonate N00.CNhs11214.646-21G74.14
kidney, neonate N10.CNhs11206.758-6D53.41
kidney, neonate N20.CNhs11113.832-19I14.58
kidney, neonate N25.CNhs11122.1353-25F34.40
kidney, neonate N30.CNhs11203.1385-42H13.70
liver, adult pregnant day01.CNhs10466.508-5B26.23
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F53.14
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H26.70
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H13.41
liver, neonate N30.CNhs11106.1382-42D16.75
lung, adult.CNhs10474.28-22B14.62
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F84.07
lung, embryo E15.CNhs11020.432-17C53.90
lung, embryo E16.CNhs10998.458-17B63.05
lung, embryo E17.CNhs10605.480-44A63.02
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E53.94
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E64.94
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C72.94
lung, neonate N30.CNhs11133.1394-42H24.63
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C23.21
medulla oblongata, neonate N30.CNhs11200.1396-42A33.28
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I73.55
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I44.72
oviduct, adult pregnant day01.CNhs10500.988-6G64.62
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H33.02
skin, neonate N06.CNhs11097.693-20I52.15
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G22.22
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H13.14
spleen, neonate N25.CNhs11099.1354-25G33.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.21
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D43.78
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A92.89
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I12.07
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F53.59
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B73.99
testis, neonate N07.CNhs11222.726-26I44.30
testis, neonate N10.CNhs11204.763-44D97.97
testis, neonate N20.CNhs11110.839-18H35.56
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I22.36
thymus, embryo E16.CNhs11002.456-26C52.47
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C41.82
thymus, neonate N07.CNhs11211.713-19D31.52
thymus, neonate N10.CNhs11194.748-24E41.71
thymus, neonate N20.CNhs11186.820-7A21.75
thymus, neonate N25.CNhs11125.1362-25G71.92
thymus, neonate N30.CNhs11132.1393-42G22.69
tongue, adult.CNhs10499.32-1B43.85
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.44
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E45.60
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E53.30
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I82.39
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk region element3.92e-0879
anatomical cavity6.03e-0739







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:53344833..53344852,-&oldid=3061370"