FFCP PHASE1:Mm9::chr9:77804942..77804984,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=387|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:77804942..77804984,+|id=chr9:77804942..77804984,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,5.66e-21,5;CL:0000223,6.01e-08,20;CL:0000057,1.53e-07,1;CL:0000632,1.53e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!1.12e-07!25;UBERON:0002330!1.12e-07!25|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.12e-19,25;UBERON:0002330,1.12e-19,25;UBERON:0002107,7.92e-18,22;UBERON:0007499,7.92e-18,22;UBERON:0006925,7.92e-18,22;UBERON:0009497,7.92e-18,22;UBERON:0000015,7.92e-18,22;UBERON:0002423,7.92e-18,22;UBERON:0006235,7.92e-18,22;UBERON:0008835,7.92e-18,22;UBERON:0003894,7.92e-18,22;UBERON:0004161,7.92e-18,22;UBERON:0008836,7.92e-18,22;UBERON:0009854,5.06e-17,23;UBERON:0009856,5.06e-17,23;UBERON:0002530,1.21e-08,65;UBERON:0003929,2.07e-08,55;UBERON:0005256,2.51e-08,45;UBERON:0003914,6.16e-08,47;UBERON:0002368,1.27e-07,60;UBERON:0005172,1.40e-07,49;UBERON:0005173,1.40e-07,49;UBERON:0002417,1.40e-07,49;UBERON:0000916,1.40e-07,49;UBERON:0000490,7.75e-07,66|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0.468129052643987,0,0.0797721589953364,0,0.34968160967599,0,0,0.699561878128147,0,0,0,0,0.198581902401771,0,0,0.45881856213434,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0.101376931219515,0,0,0,0,0.194429899074283,0.839918529752175,0,0.167782606057736,0.725362142011344,0,0,0.286533439938757,0,0.202316460859598,0,0,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,0.207379224616955,0.675029691658453,0,0,0.220868540951614,0,0.191690942036473,0,0,0.255374676170375,0.768032666281217,0,0.182975287204819,0,0,0,0.45839474333043,1.47314292736834,0.142371680799103,0,0.151452386666368,0.151143120213571,0,1.72084775396277,2.719885334831,7.01614149129162,3.89865850468601,2.24013443548668,0.842666520790511,0.170430322578058,0.259786004602869,0,0,1.28326477414318,0,0,0,0.760079596425296,0,0.34255163915718,0,0.29688427812965,0,0.913396434936424,0,0.60289056221049,0.470354828542819,0.376999773989026,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0,0.299581278809645,0,0,0,0,0.20778804455956,0,0.101839363850316,0,0,18.0979996062368,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,4.13925393182425,0,0.189106080167819,0,0,0.278047249225598,0,0.205782136407943,0,0,0.51469581422943,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.126473074248515,0,0.156998727841375,0,0.889357881261447,0,0.393117990226406,0,0,0,0,0,0.324270453550071,0.274561413188081,12.9391385874619,1.11642284300551,1.87222603868736,0.252578877947112,0.896987067609561,0.964887042726734,0.369506380333209,0,0,0,0.234690248288502,0,0.476087281772027,0,0.472905432318573,0.664394068946325,0,0.983179888294428,0.172684981865896,0.144649058581512,0,0,1.47529281905711,0.551873492609465,0,0.35163505977661,0,0,0,0,0,0,0,0.566153061577665,0,0,0.395287777946524,0,0.141940085208269,0.35613120733451,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0.388076051348264,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0,0.556275906031529,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0.169978429993855,0.139951452323658,0.138199973804424,0,0.316335993581135,0,0,0.418176592028937,0,0.134864346384821,0.165306911450672,0,0,0.621339313086926,0,0.149516546043979,0,0,0.258319646955462,0,0.58678619322877,0.13020438484395,0,0,0.288030006257865,0,0,0.205421914329655,0.129920822977795,0,0,0.240390899039938,0.147689527174577,0.201932899896295,0.0762068066549998,0,0.292373642219257,0.192423683280659,0.233753804363138,0,0,0.269141569828427,0.167884616364078,0,0,0.36630324853453,0,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0.453142408984205,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0,0,0.169229215783353,0,0,0.407412341537585,0,0.237270036248348,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr9:77804942..77804984,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=387 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:77804942..77804984,+ | |||
|id=chr9:77804942..77804984,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.66e-21,5;CL:0000223,6.01e-08,20;CL:0000057,1.53e-07,1;CL:0000632,1.53e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!1.12e-07!25;UBERON:0002330!1.12e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.12e-19,25;UBERON:0002330,1.12e-19,25;UBERON:0002107,7.92e-18,22;UBERON:0007499,7.92e-18,22;UBERON:0006925,7.92e-18,22;UBERON:0009497,7.92e-18,22;UBERON:0000015,7.92e-18,22;UBERON:0002423,7.92e-18,22;UBERON:0006235,7.92e-18,22;UBERON:0008835,7.92e-18,22;UBERON:0003894,7.92e-18,22;UBERON:0004161,7.92e-18,22;UBERON:0008836,7.92e-18,22;UBERON:0009854,5.06e-17,23;UBERON:0009856,5.06e-17,23;UBERON:0002530,1.21e-08,65;UBERON:0003929,2.07e-08,55;UBERON:0005256,2.51e-08,45;UBERON:0003914,6.16e-08,47;UBERON:0002368,1.27e-07,60;UBERON:0005172,1.40e-07,49;UBERON:0005173,1.40e-07,49;UBERON:0002417,1.40e-07,49;UBERON:0000916,1.40e-07,49;UBERON:0000490,7.75e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0.468129052643987,0,0.0797721589953364,0,0.34968160967599,0,0,0.699561878128147,0,0,0,0,0.198581902401771,0,0,0.45881856213434,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0.101376931219515,0,0,0,0,0.194429899074283,0.839918529752175,0,0.167782606057736,0.725362142011344,0,0,0.286533439938757,0,0.202316460859598,0,0,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,0.207379224616955,0.675029691658453,0,0,0.220868540951614,0,0.191690942036473,0,0,0.255374676170375,0.768032666281217,0,0.182975287204819,0,0,0,0.45839474333043,1.47314292736834,0.142371680799103,0,0.151452386666368,0.151143120213571,0,1.72084775396277,2.719885334831,7.01614149129162,3.89865850468601,2.24013443548668,0.842666520790511,0.170430322578058,0.259786004602869,0,0,1.28326477414318,0,0,0,0.760079596425296,0,0.34255163915718,0,0.29688427812965,0,0.913396434936424,0,0.60289056221049,0.470354828542819,0.376999773989026,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0,0.299581278809645,0,0,0,0,0.20778804455956,0,0.101839363850316,0,0,18.0979996062368,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,4.13925393182425,0,0.189106080167819,0,0,0.278047249225598,0,0.205782136407943,0,0,0.51469581422943,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.126473074248515,0,0.156998727841375,0,0.889357881261447,0,0.393117990226406,0,0,0,0,0,0.324270453550071,0.274561413188081,12.9391385874619,1.11642284300551,1.87222603868736,0.252578877947112,0.896987067609561,0.964887042726734,0.369506380333209,0,0,0,0.234690248288502,0,0.476087281772027,0,0.472905432318573,0.664394068946325,0,0.983179888294428,0.172684981865896,0.144649058581512,0,0,1.47529281905711,0.551873492609465,0,0.35163505977661,0,0,0,0,0,0,0,0.566153061577665,0,0,0.395287777946524,0,0.141940085208269,0.35613120733451,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0.388076051348264,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0,0.556275906031529,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0.169978429993855,0.139951452323658,0.138199973804424,0,0.316335993581135,0,0,0.418176592028937,0,0.134864346384821,0.165306911450672,0,0,0.621339313086926,0,0.149516546043979,0,0,0.258319646955462,0,0.58678619322877,0.13020438484395,0,0,0.288030006257865,0,0,0.205421914329655,0.129920822977795,0,0,0.240390899039938,0.147689527174577,0.201932899896295,0.0762068066549998,0,0.292373642219257,0.192423683280659,0.233753804363138,0,0,0.269141569828427,0.167884616364078,0,0,0.36630324853453,0,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0.453142408984205,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0,0,0.169229215783353,0,0,0.407412341537585,0,0.237270036248348,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr9:77804942..77804984,+ | |||
}} |
Revision as of 18:49, 14 September 2013
Short description: | p@chr9:77804942..77804984, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:77804942..77804984, + |
Coexpression cluster: | MCL_coexpression_mm9:387 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.66e-21 | 5 |
endodermal cell | 6.01e-08 | 20 |
fibroblast | 1.53e-07 | 1 |
hepatic stellate cell | 1.53e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 1.12e-19 | 25 |
exocrine system | 1.12e-19 | 25 |
liver | 7.92e-18 | 22 |
epithelial sac | 7.92e-18 | 22 |
digestive gland | 7.92e-18 | 22 |
epithelium of foregut-midgut junction | 7.92e-18 | 22 |
anatomical boundary | 7.92e-18 | 22 |
hepatobiliary system | 7.92e-18 | 22 |
foregut-midgut junction | 7.92e-18 | 22 |
hepatic diverticulum | 7.92e-18 | 22 |
liver primordium | 7.92e-18 | 22 |
septum transversum | 7.92e-18 | 22 |
liver bud | 7.92e-18 | 22 |
digestive tract diverticulum | 5.06e-17 | 23 |
sac | 5.06e-17 | 23 |
gland | 1.21e-08 | 65 |
gut epithelium | 2.07e-08 | 55 |
trunk mesenchyme | 2.51e-08 | 45 |
epithelial tube | 6.16e-08 | 47 |
endocrine gland | 1.27e-07 | 60 |
abdomen element | 1.40e-07 | 49 |
abdominal segment element | 1.40e-07 | 49 |
abdominal segment of trunk | 1.40e-07 | 49 |
abdomen | 1.40e-07 | 49 |
unilaminar epithelium | 7.75e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.