FFCP PHASE1:Mm9::chrX:99447403..99447426,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12705|HGNC=|UniProt=|association_with_transcript=75bp_to_uc009tyo.1_5end|description=CAGE_peak_2_at_Cited1_5end|id=chrX:99447403..99447426,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003135!1.47e-07!15;UBERON:0003133!2.65e-07!24;UBERON:0000473!4.06e-07!14;UBERON:0003101!6.68e-07!16;UBERON:0000079!6.68e-07!16;UBERON:0000991!9.58e-07!18;UBERON:0005564!9.58e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0003135,4.54e-08,15;UBERON:0000473,1.36e-07,14;UBERON:0003133,3.31e-07,24;UBERON:0000991,3.46e-07,18;UBERON:0005564,3.46e-07,18;UBERON:0003101,4.20e-07,16;UBERON:0000079,4.20e-07,16;UBERON:0004176,5.34e-07,17;UBERON:0009196,5.34e-07,17;UBERON:0009117,5.34e-07,17|phase1_expression=4.16387002472464,0,0,0,0,0,0.233612640595526,0,0.140788722151667,0.234064526321993,0,0,0.171200729931206,0,0,0,0,0,0,0,9.09963204616447,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,22.8611042445467,33.2134985295668,0,0.288851619751275,1.16364251750945,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0.782391344348039,2.39827672018491,0.439372365468944,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0.515672092277442,0.809265843438391,4.23192783417626,2.53532561402472,4.06613438482959,0.889294796111139,0.449949858640699,0,4.9733608046227,5.39280198933128,8.83702102239575,0.311068836925433,0,0.841299845405528,3.42781181284564,5.30084498283872,0.244981598429908,0.287536413054709,0,0,1.27687338085188,2.61131106535614,1.05509030184155,2.01272815925301,1.04182674111352,6.42120897703176,7.31591393041184,4.5839474333043,4.71405736757868,3.27454865837937,1.1183966749518,0.605809546665472,0.529000920747499,0.579728977403356,0,1.3599426674155,0,0,0,2.10666630197628,0,0,0,3.80277233397037,0,0,0,0,0,0.505524445014783,2.51204535381932,0.258937883647172,10.8362761517322,5.55153045651635,3.34912026143355,3.22861696158482,1.3565037649736,1.99900802130698,0.879666139307728,21.2587672251562,0.289198713839823,0,8.41187619726528,0.220841518460394,0.484875253135222,0,0.585561594023094,0.628340120440365,0,0,0,0,3.89455662452539,0.457500602818626,0.753926112677186,2.08589184230732,1.02286182932132,2.28566849015516,2.10913641988085,1.32391173005411,4.60305791257344,11.3725241295154,3.15662783829711,1.82168620147785,1.60931473103431,0.900310649026746,2.26057226753573,1.2246569847239,1.7935920839879,1.96773621575431,2.58703370739016,7.76044774558232,7.37513712654495,6.862093842394,7.01426343768239,4.17070873838397,8.00979983000983,3.90986059175093,4.97585667046233,0,0,0,73.9439007951742,82.3186470533648,81.9282379647618,61.3168865165695,63.5548468544114,58.1587015585416,63.2492329721109,49.0940324561303,33.6284186017448,36.0386071310522,8.04420573987567,2.10778904819225,1.46199987425332,3.51280184465681,2.41571553768669,0.420579897128254,0.102904612379284,0,0.264450566663544,0.853153002140936,2.78684006232526,1.03093969057675,0.403367049246685,0,0.951128130562796,0,0.164698954724011,0,0,0.58489226135736,0.898819408654221,0.216138049874694,0.597423819763102,14.2250925714811,9.13988100877831,5.63538678365402,14.255592949172,8.72786192254316,6.31222379012867,1.39120381673366,1.47610147979602,1.8839847340965,1.35736880313981,0,16.8513556773255,13.562570662811,12.367416181167,15.8230894683032,13.0235666266305,7.89340140522401,0,0,1.37280706594041,0,1.11642284300551,0.624075346229121,0.252578877947112,0.538192240565737,0,0.184753190166605,5.68474235311454,3.25929952884052,3.39490171550376,3.52035372432753,2.84760637651087,2.61848004974615,0.390267295715598,0.472905432318573,0,0.318909537314974,0.163863314715738,0.345369963731791,0.144649058581512,0,0.54390568381871,0.983528546038072,1.10374698521893,4.65596710964597,3.5163505977661,0,2.27223834483936,13.566853434899,16.0079885161622,7.75524231838076,27.0034741686384,16.7099005561796,14.1538265394416,16.5972387686707,14.9050487534769,18.5785255634866,1.28528526568723,2.6968616189571,1.42452482933804,1.62886959353576,0.164970122972535,0,8.49732226542435,6.65111825322452,3.39489143560617,2.95301892880773,1.53717573971964,0,1.09060118843252,1.06949213515416,0.632073515871632,0,1.03135543248187,1.36175842301515,1.62054984628179,2.45781499187234,1.92903331528433,1.41872186913819,2.49716344642899,1.31639216481697,3.04464949114599,26.9872464273267,95.9599281013105,0.441056796109924,0,0.807322133479528,0.663442174209714,0.358117032009409,0.820704498725306,0.291480836629851,5.37733375830478,0.170870880797853,1.23832120777933,1.11116716421827,0,0,0.228778173206523,0.169978429993855,0,0.138199973804424,0,1.26534397432454,3.04979200690273,1.29606408986162,0.627264888043406,1.31017538247707,1.07891477107857,0.495920734352016,0.26175594198403,0.518459893167171,0,47.9138997881562,14.054555328134,23.3296471544508,18.8617652693726,21.8280101677366,19.767866682421,17.2515140809258,40.3633593016245,88.2915680064485,58.2217731190675,42.0523809136484,0.632022241256357,2.8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| ||
|EntrezGene=12705 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=75bp_to_uc009tyo.1_5end | |||
|description=CAGE_peak_2_at_Cited1_5end | |||
|id=chrX:99447403..99447426,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!1.47e-07!15;UBERON:0003133!2.65e-07!24;UBERON:0000473!4.06e-07!14;UBERON:0003101!6.68e-07!16;UBERON:0000079!6.68e-07!16;UBERON:0000991!9.58e-07!18;UBERON:0005564!9.58e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,4.54e-08,15;UBERON:0000473,1.36e-07,14;UBERON:0003133,3.31e-07,24;UBERON:0000991,3.46e-07,18;UBERON:0005564,3.46e-07,18;UBERON:0003101,4.20e-07,16;UBERON:0000079,4.20e-07,16;UBERON:0004176,5.34e-07,17;UBERON:0009196,5.34e-07,17;UBERON:0009117,5.34e-07,17 | |||
|phase1_expression=4.16387002472464,0,0,0,0,0,0.233612640595526,0,0.140788722151667,0.234064526321993,0,0,0.171200729931206,0,0,0,0,0,0,0,9.09963204616447,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,22.8611042445467,33.2134985295668,0,0.288851619751275,1.16364251750945,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0.782391344348039,2.39827672018491,0.439372365468944,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0.515672092277442,0.809265843438391,4.23192783417626,2.53532561402472,4.06613438482959,0.889294796111139,0.449949858640699,0,4.9733608046227,5.39280198933128,8.83702102239575,0.311068836925433,0,0.841299845405528,3.42781181284564,5.30084498283872,0.244981598429908,0.287536413054709,0,0,1.27687338085188,2.61131106535614,1.05509030184155,2.01272815925301,1.04182674111352,6.42120897703176,7.31591393041184,4.5839474333043,4.71405736757868,3.27454865837937,1.1183966749518,0.605809546665472,0.529000920747499,0.579728977403356,0,1.3599426674155,0,0,0,2.10666630197628,0,0,0,3.80277233397037,0,0,0,0,0,0.505524445014783,2.51204535381932,0.258937883647172,10.8362761517322,5.55153045651635,3.34912026143355,3.22861696158482,1.3565037649736,1.99900802130698,0.879666139307728,21.2587672251562,0.289198713839823,0,8.41187619726528,0.220841518460394,0.484875253135222,0,0.585561594023094,0.628340120440365,0,0,0,0,3.89455662452539,0.457500602818626,0.753926112677186,2.08589184230732,1.02286182932132,2.28566849015516,2.10913641988085,1.32391173005411,4.60305791257344,11.3725241295154,3.15662783829711,1.82168620147785,1.60931473103431,0.900310649026746,2.26057226753573,1.2246569847239,1.7935920839879,1.96773621575431,2.58703370739016,7.76044774558232,7.37513712654495,6.862093842394,7.01426343768239,4.17070873838397,8.00979983000983,3.90986059175093,4.97585667046233,0,0,0,73.9439007951742,82.3186470533648,81.9282379647618,61.3168865165695,63.5548468544114,58.1587015585416,63.2492329721109,49.0940324561303,33.6284186017448,36.0386071310522,8.04420573987567,2.10778904819225,1.46199987425332,3.51280184465681,2.41571553768669,0.420579897128254,0.102904612379284,0,0.264450566663544,0.853153002140936,2.78684006232526,1.03093969057675,0.403367049246685,0,0.951128130562796,0,0.164698954724011,0,0,0.58489226135736,0.898819408654221,0.216138049874694,0.597423819763102,14.2250925714811,9.13988100877831,5.63538678365402,14.255592949172,8.72786192254316,6.31222379012867,1.39120381673366,1.47610147979602,1.8839847340965,1.35736880313981,0,16.8513556773255,13.562570662811,12.367416181167,15.8230894683032,13.0235666266305,7.89340140522401,0,0,1.37280706594041,0,1.11642284300551,0.624075346229121,0.252578877947112,0.538192240565737,0,0.184753190166605,5.68474235311454,3.25929952884052,3.39490171550376,3.52035372432753,2.84760637651087,2.61848004974615,0.390267295715598,0.472905432318573,0,0.318909537314974,0.163863314715738,0.345369963731791,0.144649058581512,0,0.54390568381871,0.983528546038072,1.10374698521893,4.65596710964597,3.5163505977661,0,2.27223834483936,13.566853434899,16.0079885161622,7.75524231838076,27.0034741686384,16.7099005561796,14.1538265394416,16.5972387686707,14.9050487534769,18.5785255634866,1.28528526568723,2.6968616189571,1.42452482933804,1.62886959353576,0.164970122972535,0,8.49732226542435,6.65111825322452,3.39489143560617,2.95301892880773,1.53717573971964,0,1.09060118843252,1.06949213515416,0.632073515871632,0,1.03135543248187,1.36175842301515,1.62054984628179,2.45781499187234,1.92903331528433,1.41872186913819,2.49716344642899,1.31639216481697,3.04464949114599,26.9872464273267,95.9599281013105,0.441056796109924,0,0.807322133479528,0.663442174209714,0.358117032009409,0.820704498725306,0.291480836629851,5.37733375830478,0.170870880797853,1.23832120777933,1.11116716421827,0,0,0.228778173206523,0.169978429993855,0,0.138199973804424,0,1.26534397432454,3.04979200690273,1.29606408986162,0.627264888043406,1.31017538247707,1.07891477107857,0.495920734352016,0.26175594198403,0.518459893167171,0,47.9138997881562,14.054555328134,23.3296471544508,18.8617652693726,21.8280101677366,19.767866682421,17.2515140809258,40.3633593016245,88.2915680064485,58.2217731190675,42.0523809136484,0.632022241256357,2.8381530140623,2.2596410576262,2.07873316764472,0.537080087002444,1.19208812868759,0.120195449519969,0.147689527174577,0.302899349844443,0.381034033274999,0.100826185136841,0.292373642219257,0.288635524920988,0,0.680191150845634,51.500741182783,7.17710852875806,38.9492309964662,0,0.93841237725591,1.64836461840539,0.428736758158132,1.50471631210609,1.6942555278512,3.68260189205742,0.572895513439397,2.06223818812425,2.05524755931193,1.5107877947794,1.35004500046361,1.80128481289688,2.26571204492102,1.55328093525546,7.16132698330819,5.58634822761443,5.63420898988643,6.32077464377565,10.6902712940271,6.06683577885047,4.88942801163553,6.18105171716683,5.77654577265267,5.30664144703975,4.56262739802432,4.14977951049368,5.3375659257833,5.95433917365284,6.08815970929501,6.19181798667996,3.94006708212509,5.787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| |||
|short_description=p2@Cited1 | |||
}} | |||
Revision as of 20:21, 14 September 2013
| Short description: | p2@Cited1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Cited1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 75bp_to_uc009tyo.1_5end |
| EntrezGene: | Cited1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| male reproductive organ | 4.54e-08 | 15 |
| testis | 1.36e-07 | 14 |
| reproductive organ | 3.31e-07 | 24 |
| gonad | 3.46e-07 | 18 |
| gonad primordium | 3.46e-07 | 18 |
| male organism | 4.20e-07 | 16 |
| male reproductive system | 4.20e-07 | 16 |
| external genitalia | 5.34e-07 | 17 |
| indifferent external genitalia | 5.34e-07 | 17 |
| indifferent gonad | 5.34e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
