FFCP PHASE1:Hg19::chr1:35656508..35656584,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6421 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10774 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-314bp_to_uc001byr.2_5end | |||
|coexpression_cluster_id=C1857 | |||
|description=CAGE_peak_2_at_SFPQ_5end | |||
|id=chr1:35656508..35656584,- | |||
|ontology_enrichment_celltype=CL:0000860!1.06e-10!45;CL:0002057!4.20e-10!42;CL:0000063!2.57e-09!578;CL:0002087!2.09e-08!119;CL:0000012!2.45e-08!682;CL:0000548!6.68e-08!679;CL:0000004!6.68e-08!679;CL:0000255!6.68e-08!679;CL:0002032!1.77e-07!165;CL:0000837!1.77e-07!165;CL:0000003!3.61e-07!722;CL:0000037!4.88e-07!172;CL:0000566!4.88e-07!172;CL:0000988!6.42e-07!182;CL:0002031!8.04e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.53e-12;33!CL:0002057;5.53e-12;33!CL:0000473;2.36e-08;39!CL:0000234;2.36e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.72e-10,42;CL:0002057,2.72e-10,42;CL:0000473,7.47e-09,48;CL:0000234,7.47e-09,48;CL:0002087,1.70e-08,115;CL:0002032,8.04e-08,161;CL:0000837,8.04e-08,161;CL:0000037,2.23e-07,168;CL:0000988,4.01e-07,177;CL:0002031,5.94e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;6.11e-08;42 | |||
|ontology_enrichment_disease=DOID:162!2.35e-14!235;DOID:14566!8.32e-14!239;DOID:2531!5.69e-08!51;DOID:0060083!5.69e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.69e-14,235;DOID:14566,7.17e-14,239;DOID:2531,2.92e-08,51;DOID:0060083,2.92e-08,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p2@SFPQ | |||
}} |
Revision as of 17:46, 10 January 2014
Short description: | p2@SFPQ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SFPQ_5end |
Coexpression cluster: | C1857_CD14_acute_CD4_diffuse_CD8_medulloblastoma_Neutrophils |
Association with transcript: | -314bp_to_uc001byr.2_5end |
EntrezGene: | SFPQ |
HGNC: | 10774 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.72e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.72e-10 | 42 |
defensive cell | 7.47e-09 | 48 |
phagocyte | 7.47e-09 | 48 |
nongranular leukocyte | 1.70e-08 | 115 |
hematopoietic oligopotent progenitor cell | 8.04e-08 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-08 | 161 |
hematopoietic stem cell | 2.23e-07 | 168 |
hematopoietic cell | 4.01e-07 | 177 |
hematopoietic lineage restricted progenitor cell | 5.94e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.69e-14 | 235 |
disease of cellular proliferation | 7.17e-14 | 239 |
hematologic cancer | 2.92e-08 | 51 |
immune system cancer | 2.92e-08 | 51 |