FFCP PHASE1:Hg19::chr1:43148625..43148710,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4904 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8014 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000436427_5end | |||
|description=CAGE_peak_3_at_YBX1_5end | |||
|id=chr1:43148625..43148710,+ | |||
|ontology_enrichment_celltype=CL:0002319!3.63e-10!25;CL:0000133!5.04e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002319;8.13e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.18e-11,25;CL:0000133,1.17e-08,59;CL:0000047,3.07e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.76e-19!239;DOID:162!2.51e-19!235;DOID:0050687!1.76e-13!143;DOID:305!2.92e-10!106;DOID:0050686!8.03e-10!137;DOID:0050615!7.68e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:0050615;2.10e-07;16!DOID:1036;9.86e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.89e-17,239;DOID:162,5.11e-17,235;DOID:0050687,5.42e-12,143;DOID:0050686,8.58e-10,137;DOID:305,3.35e-08,106;DOID:0050615,1.07e-07,16;DOID:1324,5.71e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0003104!9.71e-08!238;UBERON:0009142!9.71e-08!238;UBERON:0000481!1.64e-07!347 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.908391896352783,0,0.704772020479856,0,0.446961094427288,0,0,1.26343974685366,1.04474251279935,0.491467873003018,0,0.218441372130172,0.527533956456907,1.23766352960047,1.32558950291166,0,1.20538905604795,1.46062018077475,1.46379839637152,1.84681587115182,2.44800829493104,2.5076377718247,2.0036519099174,2.32686522623903,2.00868223351684,1.45185470921107,3.03772180964799,1.96776953284198,0,0,0.154816123316076,1.83884244895785,1.8072355126695,0.369754010166788,1.85921281392724,2.13253848731132,2.34880351467878,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0,0,0,0,0.32145117339416,0.285012743741249,0.19891667719909,0.182664153764634,0,0,2.66852776159066,0.853460445133014,0,0.574752439954483,0,0,0,1.17447437874188,0.382273228125229,2.64342657158052,1.12101712596307,1.05353633910031,0.590129310341499,0.393010762749165,0.205601498999509,0.334372990781356,0.32592226663359,0.473447805734733,0,0.222820913770347,0.589211814949674,0.443067789167242,0,0.128091319725675,0.520237390239513,0.164437904603676,0,0,0.593146252648242,1.07016331235885,0,0.113309342697566,0.383220493601921,0.34362744548263,0.506039384039006,0.637130828648193,0,0.950452044448374,0.602300476311091,0.127986611154418,0,0.710331756132051,0,0.80642697289893,0,0.579297615531196,0,0.670700859703636,0.511450247374121,1.0843174571537,0.50133791063589,1.01392563272577,0.795285947051099,0,1.79616152611729,2.21729397462564,1.75669571386252,1.96468613246569,0,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0,1.04142150482278,1.69592382577203,0.838998872419812,0.275118041940067,1.46296476575767,0.258416759169329,0.71153252537342,0.33472061276467,0,0,0.488124115096339,1.10298924103761,0.81014194788176,0.714397826272638,0.898117490504679,1.0135033243499,1.53316637465883,0.949265659568129,1.64881569537367,0,0,0.436094052142534,0,1.8994576749687,0.529636723252875,0.860509862246441,1.06400514659507,1.12135520028461,1.06748995729705,1.72667283892012,0.622422070799533,0.67355336034844,0.653847612453835,1.81628913173918,0.576175924479999,2.34321431833797,1.24864030732128,3.99330275081114,1.19558944441441,2.23125547423153,2.10434827678571,1.96631129383148,1.63323337003915,0.737005903870608,2.16984140469107,1.18800285728205,3.4617370098998,1.82032272387605,0,1.0100166837244,1.87677779807946,1.10825646193673,0.438977620880838,1.22595118319608,1.80285670687916,0.453728732640084,0,0,0.635795703478686,0,0.515262646192195,0,0.18611685633159,0.168776332241266,0.389748020644795,0,0.276149695926898,0.484938170456436,0.355009592516614,0.503760491138201,1.01736355386293,0,0.272746120590835,0.860413786167011,5.00092195131341,7.95178609928912,4.88014560051977,3.73179798055334,4.79409616663694,4.74470566798579,0,1.28648187638577,1.38134921352481,1.39310378409594,1.44375896333917,0.946454400318751,0.505754070234305,1.68707720918437,0.772057809126758,1.52515610864684,2.37270619111097,0.943819157121151,1.56977172100277,0.769494313892781,0.738155454624648,1.40241773803446,0.8231480226628,4.41026134156626,1.26755034821831,0,0.590789906681404,1.32438929824395,0.368965315629341,1.20097467208968,0.219500570817251,0,0.804231779293047,0.925884451585296,2.28065813717227,1.03993478527958,2.88662684050547,0.695582429850461,1.76113041353732,0.433099343283221,0,0.570762456703795,0,0,0,0,0,0,0.503946384596579,0.283550194484773,0.895585227028483,0.290633938513962,0,0.492663237895943,0.088048434013226,0.621984346622316,0.432359860250884,0.75745460055828,0.126995788584338,0,1.17217447210047,1.71072446022705,0,0,0.285826432630578,1.79409734952577,3.92364061949952,1.3200891447771,0.517086863031111,0,0.845302752556,0.531876233169741,0,1.02882949704857,0,1.0656887160644,0.857867961948885,1.08524321078289,0.823240336780769,0.977208552881205,0,2.37585561880029,1.50719688529793,1.74306691720059,0.699810938274399,0,0,0,0.718874566474748,0,1.42636905040718,1.15825045334063,0.410952645100767,0.716243852959582,1.79336230389644,0.197030760201927,0.431255149719035,0.641715181398742,2.03275699377971,7.8083912314573,6.95959931499926,8.04078073604874,10.2070200264506,0,0,0,2.20844685094452,2.00068208423871,2.98391526069709,0.623912584592421,0.713715955188647,0.788512075169673,0.702848489956279,0.601892199455438,2.27407504055985,1.03473071292505,1.32845119707087,1.29058417979192,0.781952530212746,2.34961388955289,3.77457766191941,0.206768026122887,0,0.426910231213777,1.5156378572313,0,0.604780586659361,0.992431231275107,0.153461973288062,0.280660094433074,0.384417447767103,0.511707249066704,0.321707842287215,0,1.07946785661859,0.355123450626254,1.72467027628999,0.519254429183621,1.74315567689939,0.725156697549733,0.40101294060657,0.368323955743585,1.60740227430449,1.82091168006717,1.04899531967539,0.902399225814824,0.15403067420883,4.70609861506113,1.46139224653261,0.633309773357254,0,0.850468526382578,1.0795795805107,1.54227252690289,0.812839312631559,1.00337954770971,0.764628819135115,0.83107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| |||
|short_description=p3@YBX1 | |||
}} |
Revision as of 18:09, 10 January 2014
Short description: | p3@YBX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_YBX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000436427_5end |
EntrezGene: | YBX1 |
HGNC: | 8014 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.18e-11 | 25 |
neurectodermal cell | 1.17e-08 | 59 |
neuronal stem cell | 3.07e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.89e-17 | 239 |
cancer | 5.11e-17 | 235 |
cell type cancer | 5.42e-12 | 143 |
organ system cancer | 8.58e-10 | 137 |
carcinoma | 3.35e-08 | 106 |
respiratory system cancer | 1.07e-07 | 16 |
lung cancer | 5.71e-07 | 15 |