FFCP PHASE1:Hg19::chr1:55340870..55340885,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:55340870..55340885,- | |||
|id=chr1:55340870..55340885,- | |||
|ontology_enrichment_celltype=CL:0000066!3.04e-14!254;CL:0000220!1.20e-10!246;CL:0002321!1.31e-10!248;CL:0000223!2.07e-08!59;CL:0002076!4.49e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:1000497;3.46e-07;17!CL:0002518;3.46e-07;17!CL:0002328;6.85e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.03e-08,253;CL:1000497,2.94e-07,17;CL:0002518,2.94e-07,17;CL:0002328,6.67e-07,3;CL:0000223,6.97e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.79e-09!365;UBERON:0000119!5.29e-07!312;UBERON:0000483!9.32e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;6.85e-07;3!UBERON:0002031;6.85e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000033,1.14e-07,56;UBERON:0001444,1.84e-07,49;UBERON:0000153,3.17e-07,62;UBERON:0007811,3.17e-07,62;UBERON:0004815,6.67e-07,3;UBERON:0002031,6.67e-07,3 | |||
|phase1_expression=0.726713517082227,6.20891519283851,0.986680828671798,0,1.78784437770915,4.36169262050184,0,0,1.82829939739887,0.245733936501509,2.79120467188971,0.218441372130172,1.05506791291381,0.495065411840187,1.32558950291166,0,0,0,0,0.492484232307152,1.22400414746552,0.626909442956176,0.85870796139317,2.05311637609326,1.25542639594803,0.687720651731561,0.410502947249729,0.393553906568396,0,0,0,4.59710612239464,4.2168828628955,3.32778609150109,0.0774672005803016,0.284338464974843,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0.493313713811028,0.552700035571697,0,0,0,0,0.453237370790265,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0.670700859703636,0,0.361439152384566,0.50133791063589,0.434539556882471,0,0,1.22895262313288,0.886917589850256,2.3715392137144,0.196468613246569,0,0,0.324547393654683,0.348259474598534,1.19662164466979,0,0,0,0.79504962946682,0.860234595106124,0,1.13061588384802,0.419499436209906,0.275118041940067,1.04497483268405,0.258416759169329,0.35576626268671,0.66944122552934,0.402829317109147,0,0,0,0,0.714397826272638,0,0.337834441449967,0,0,0.183201743930407,0,0,0.872188104285069,0.496971951695318,0.379891534993739,0,1.72101972449288,1.06400514659507,0.560677600142307,0,0,0,1.61652806483626,1.30769522490767,0.151357427644931,1.15235184896,0,0,0.570471821544449,0.298897361103602,2.23125547423153,1.61872944368132,1.82586048712923,0.61246251376468,3.19369225010597,2.16984140469107,0,1.48360157567134,0,0,0.168336113954066,3.00284447692714,1.10825646193673,0.877955241761676,1.22595118319608,0.751190294532984,0.226864366320042,0.538168907066586,0,0.423863802319124,1.20036438433761,0.618315175430633,0.257640540045629,0.37223371266318,0.337552664482532,0.68205903612839,0.504867548488229,0.552299391853796,0,1.42003837006646,0.604512589365842,0,1.54608682530637,0.545492241181669,0.860413786167011,0.243947412259191,0.132529768321485,0.813357600086629,0.207322110030741,0.756962552626885,0.36497735907583,0,0,0,1.85747171212792,1.44375896333917,1.0647612003586,0.505754070234305,0.241011029883482,0.330881918197182,0.653638332277218,0.237270619111097,0.269662616320329,0.392442930250692,0.769494313892781,0.738155454624648,1.40241773803446,1.2347220339942,0,2.53510069643662,0.982827216677626,1.77236972004421,0,1.47586126251736,0,1.42675371031213,1.1240175325762,0.804231779293047,0.648119116109707,0,2.07986957055916,4.3299402607582,0.811512834825538,0.117408694235822,0.288732895522148,0.462985512576611,0.190254152234598,2.37061319387782,0,0,1.17002132569619,1.33768046059855,0,1.34385702559088,0.425325291727159,0.0895585227028483,0,2.68367875415648,0,0.352193736052904,0,0,0,0.063497894292169,0,2.34434894420094,0,1.02827492703324,0.600686115687835,0.285826432630578,0.224262168690721,0.87192013766656,0.36669142910475,0.129271715757778,0,0,0.797814349754612,0,0.514414748524284,0,1.0656887160644,0.428933980974443,0,0,0,0,0,0.301439377059586,0.871533458600294,1.29964888536674,0,0.502257091432126,0,0,0,0,0.434343920002738,0.410952645100767,0.179060963239896,0.224170287987055,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0.500170521059677,0.271265023699736,0.415941723061614,1.42743191037729,0.788512075169673,0.234282829985426,0,2.27407504055985,0,0.664225598535437,0.737476674166813,0.781952530212746,0.391602314925481,0,0,0,0,0,0,0.604780586659361,0.248107807818777,0,1.68396056659844,0.640695746278505,0,0.321707842287215,1.48418066444991,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0.846016147141356,4.21063587636898,0.552485933615378,0.574072240823034,0.546273504020151,0.655622074797121,0,0.462092022626489,0.784349769176855,4.38417673959782,0.633309773357254,0,2.38131187387122,0.863663664408557,0,1.62567862526312,3.51182841698397,1.27438136522519,4.15538004464362,2.0148727924996,0,0.261435451024901,1.02580050046556,0.984043937099117,0,0.721287081534056,1.09883357782012,0.495056999523528,0.574265537996172,3.25030123018261,0,0,0.770243085573222,1.22802939780904,0.827019434907183,0.322260734604821,1.30515024522806,0.511359764496605,0.0890320356467374,0.826424576804891,0.576570202095319,0.255225424989168,0.2023155617111,0,0,0,0.308033580176089,0,0,0.18532421910392,0.572499546967965,0,0.316379424718726,0.953150969619124,0.511795582622668,0,0.318203247925937,2.35484592059769,0.179872457583315,0.274537029736055,1.7671860351853,0,0,0,0.48763373908959,0.243713489631284,0,0,0.707027159768564,2.26016233240486,0.551365343546124,0,0,0.578775534266688,0,0,0.30982349809975,0.563391205064483,0,0.294747123039363,0.7133421029625,2.12856638442359,0.422215270595328,0,1.13841952129715,2.0996083214699,0.577332676353072,4.02181365321472,2.17781969722645,0.470719003883896,0.86101074534246,0,1.7737206141467,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0.185803175125719,0,0.142283686696828,0.159426272728822,0.798317485731266,0,0.846694330895531,0.973865820823666,1.1231887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| |||
|short_description=p@chr1:55340870..55340885,- | |||
}} |
Revision as of 18:38, 10 January 2014
Short description: | p@chr1:55340870..55340885, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:55340870..55340885, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.03e-08 | 253 |
kidney cell | 2.94e-07 | 17 |
kidney epithelial cell | 2.94e-07 | 17 |
bronchial epithelial cell | 6.67e-07 | 3 |
endodermal cell | 6.97e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
head | 1.14e-07 | 56 |
subdivision of head | 1.84e-07 | 49 |
anterior region of body | 3.17e-07 | 62 |
craniocervical region | 3.17e-07 | 62 |
lower respiratory tract epithelium | 6.67e-07 | 3 |
epithelium of bronchus | 6.67e-07 | 3 |