FFCP PHASE1:Hg19::chr1:152383226..152383237,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_at_chr1:152383226..152383237,- | |||
|id=chr1:152383226..152383237,- | |||
|ontology_enrichment_celltype=CL:0000068!8.62e-07!3;CL:0000069!8.62e-07!3;CL:0000307!8.62e-07!3;CL:0000377!8.62e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.46e-50;1!UBERON:0008814;6.30e-26;2!UBERON:0010056;6.30e-26;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!2.35e-23!3;UBERON:0001033!2.35e-23!3;UBERON:0010056!2.35e-23!3;UBERON:0002372!5.26e-18!1;UBERON:0001961!5.26e-18!1;UBERON:0001744!5.26e-18!1;UBERON:0001735!5.26e-18!1;UBERON:0001042!1.01e-15!10;UBERON:0009145!1.01e-15!10;UBERON:0006562!2.35e-14!11;UBERON:0000002!6.34e-12!6;UBERON:0001560!6.34e-12!6;UBERON:0008814!1.31e-10!15;UBERON:0003126!2.35e-10!7;UBERON:0001005!2.35e-10!7;UBERON:0000341!9.46e-10!2;UBERON:0003127!1.57e-09!2;UBERON:0000072!4.35e-09!46;UBERON:0000078!5.23e-09!18;UBERON:0001557!1.46e-08!19;UBERON:0000161!6.56e-08!35;UBERON:0000065!6.92e-08!53;UBERON:0000166!8.47e-08!21;UBERON:0005795!2.36e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;5.53e-66;3!UBERON:0001033;5.53e-66;3!UBERON:0000341;6.30e-26;2!UBERON:0001043;6.76e-18;3!UBERON:0000020;1.19e-09;23!UBERON:0000974;1.38e-09;6!UBERON:0001032;2.72e-09;24!UBERON:0004456;2.72e-09;24!UBERON:0000165;4.14e-08;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,4.68e-66,3;UBERON:0001033,4.68e-66,3;UBERON:0010056,4.68e-66,3;UBERON:0000341,7.14e-26,2;UBERON:0001042,9.44e-21,10;UBERON:0009145,9.44e-21,10;UBERON:0006562,5.63e-19,11;UBERON:0001043,6.76e-18,3;UBERON:0009143,6.76e-18,3;UBERON:0008814,4.81e-12,18;UBERON:0001557,1.81e-11,19;UBERON:0000166,4.74e-10,22;UBERON:0000020,2.67e-09,24;UBERON:0001032,2.67e-09,24;UBERON:0004456,2.67e-09,24;UBERON:0000153,4.61e-08,62;UBERON:0007811,4.61e-08,62;UBERON:0000165,7.15e-08,29;UBERON:0000930,7.15e-08,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95309935205039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.61025343893041,0,0,0,0.112131862580613,0,0,6.96693593270276,4.10679961302337,0.942928742204225,0.573777643141411,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | |||
|short_description=p@chr1:152383226..152383237,- | |||
}} |
Revision as of 20:55, 10 January 2014
Short description: | p@chr1:152383226..152383237, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:152383226..152383237, - |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 4.68e-66 | 3 |
gustatory system | 4.68e-66 | 3 |
future tongue | 4.68e-66 | 3 |
throat | 7.14e-26 | 2 |
chordate pharynx | 9.44e-21 | 10 |
pharyngeal region of foregut | 9.44e-21 | 10 |
pharynx | 5.63e-19 | 11 |
esophagus | 6.76e-18 | 3 |
esophageal region | 6.76e-18 | 3 |
pharyngeal arch system | 4.81e-12 | 18 |
upper respiratory tract | 1.81e-11 | 19 |
oral opening | 4.74e-10 | 22 |
sense organ | 2.67e-09 | 24 |
sensory system | 2.67e-09 | 24 |
entire sense organ system | 2.67e-09 | 24 |
anterior region of body | 4.61e-08 | 62 |
craniocervical region | 4.61e-08 | 62 |
mouth | 7.15e-08 | 29 |
stomodeum | 7.15e-08 | 29 |