FFCP PHASE1:Hg19::chr12:50390408..50390412,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:50390408..50390412,- | |||
|id=chr12:50390408..50390412,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;6.46e-09;2!CL:0000558;6.46e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.64e-09,2;CL:0000765,2.64e-09,2;CL:0000050,2.64e-09,2;CL:0000038,2.64e-09,2;CL:0000558,2.64e-09,2;CL:0000547,2.64e-09,2;CL:0000549,2.64e-09,2;CL:0000550,2.64e-09,2;CL:0000552,2.64e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.48e-24!235;DOID:14566!3.86e-23!239;DOID:0050687!6.03e-14!143;DOID:0050686!1.32e-13!137;DOID:305!2.26e-08!106;DOID:2531!3.18e-08!51;DOID:0060083!3.18e-08!51;DOID:0060058!1.10e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.18e-14;10!DOID:2531;1.87e-07;51!DOID:0060083;1.87e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.07e-14,10;DOID:2531,1.50e-10,51;DOID:0060083,1.50e-10,51;DOID:162,2.70e-09,235;DOID:14566,5.86e-09,239;DOID:0050686,5.58e-08,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0,0.572471974262113,0.273748850145768,0.251085279189606,0.458480434487708,0.410502947249729,0.550975469195755,0,0,0,0,0,0,1.16200800870452,1.70603078984906,0,0,0,0,0,0.647787332037959,0.257575567634187,0,0,0,0.464858073811369,0.411167888021826,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0.889509253863555,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.445641827540694,0,0,0.270803863765016,0.640456598628376,0.390178042679635,0.822189523018381,0.552700035571697,0.289803085735052,0.14828656316206,0,0,0.793165398882963,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0.289648807765598,0,0,0,2.89151321907653,0,0.434539556882471,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.267899184852239,0,0.450445921933289,0,0,0.183201743930407,0,0,0,0.496971951695318,0.25326102332916,0,0.573673241497627,0,0,1.06748995729705,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0.485618833104395,0.421352420106746,0.408308342509787,0.245668634623536,0,0,0,0,0,0.841680569770331,0.750711119231785,0,0,0.30648779579902,0,0.113432183160021,1.25572744982203,0,0,1.20036438433761,0,0,0.37223371266318,1.0126579934476,0.194874010322397,0.504867548488229,0,0,1.06502877754984,0.403008392910561,0,0,0,0,0.121973706129595,0,0,0,0,0.36497735907583,0,0,0,0,0.721879481669586,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0.590789906681404,2.6487785964879,0.245976877086227,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0.492434012174795,0,0.297262324577456,0,0,0,0.447792613514241,0,0,0.492663237895943,0.352193736052904,0.414656231081544,0,0,0.126995788584338,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0,0.336393253036082,0,0.1466765716419,0,3.57656445851882,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,1.56919201590938,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.35142424497814,0,0,0,0,0.368738337083406,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,1.03850885836724,0.929683027679674,0.241718899183244,0,0,0,0.364182336013434,0,0,0,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0,0,0.223874754722178,1.97333888981341,1.3071772551245,0,0,0.325378394664303,0.103041011647722,0.732555718546747,0.82509499920588,0,0,0,0,0,0.15350367472613,0.275673144969061,0.322260734604821,0.145016693914229,0.340906509664404,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0,0,0,0.534120355637366,0,2.20536194382929,0.185803175125719,1.87549976869378,0.711418433484141,0.478278818186467,0.399158742865633,0.383010740264733,0.635020748171649,0,0,1.14117339516596,0.156679895773023,2.50634477090067,0.169291777801603,0.321176150207399,0,0,1.03051603426729,0,0,0,0.19538809540204,0,0,0.270455678475983,0.66614393599564,0,0,0,0.485442086998054,1.22587722705226,1.42068073403207,0.23874448473769,0.296964680832639,0,0,0,0.111308705022906,1.15362711958732,3.1668811219199,0.19924798825107,0.276283915531148,0.503865495708552,0.409074730008619,0.246169610922139,0,0.449341755736634,0.716084698702437,0.511572370226872,0,0,0,0,0,1.99613798001194,0,0.349839999984783,0,0.455173793141999,0.254253650292766,0.236387681767936,2.06846023944879,1.16641845353302,1.04174996959975,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0,0.435753854075961,0.139423744278603,0,0,0.69169171316418,0.359030577639089,0.217294743844016,0,0.0915975934018623,0.533034776018635,0,0.31396051279005,0.166211681900156,0.225595660617181,0,0.503464760927528,1.51802986179348,0.635746315921515,0.632994193584081,1.14262965711403,0.706765357169704,0.865554558968364,0,0.0884575645033392,0,0.889563386041866,0.370691816839509,0.313265848516366,0.337005664903385,0,0.234264445725339,2.00700268137233,0.19566461893209,0,0,3.62972148145992,0.30607276163049,0.189559738885464,0.300646838828985,0.622129148383483,0,0.330991955875499,0,0,0,0,0,0.195984794828755,0.261177619741208,0.17472666824203,0.343972064943233,0.580537987734511,0.877071805034227,0.656923656425674,0.0969890164884194,0.0882561266915003,0.225980740780532,0.548167698587004,0.794858446811959,0.253243183823515,0,0,0,0.19980960958213,0.144090417154106,0.458146384663663,0.171594997861965,0,0.248505071130865,0,0.67952103036807,0.313808538937,0.713987523454252,0.577901179803038,0,0.410716136675979,0,0.859530882839914,1.05154941711726,0,0.229160424011684,0,0.599037001496973,0,0.223171457441873,0,0.360299883542404,0,0.315132729228895,0,0.471824806979294,0.0984274815147488,0.846733320657845,0,0,0.482259445395058,0.412618309791701,0,0,0,0.182248669974074,0.670869375198532,0,0.157363764404994,0,0,0.767660789277781,0,0,1.017074150619,0,0,0,2.39460383124975,0.574647645245373,0.170388021785422,0.79318464064088,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0.496166021811951,0.197611631897944,0.487170393523584,1.27668251554036,0,0,0,0,0.157054096250234,0.886068179966986,0.122026264901963,0,0.573409195690071,0.221858103073705,0.18628920882415,0.830091809617385,0.37494122388632,0.303298235083296,0.856396000634902,0.235265819698172,0.936669811613763,1.01444720027578,0,0,0,0.189403005275089,0,0.889811221596536,0,0.302461847526478,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0.363697318405119,0,0,0,1.20008329398946,0.343395705182793,0,0,0.192619830407303,0.643324774124777,0,0.453411851024545,0,0.244736704506468,0,0.926404341482917,0.219284049578707,0.353378291891762,0.578742114812744,0.168942440653073,0,0,0.303859956177382,0.276516872303462,0.194860308839388,0,0,0,0.491545817507439,0,0.79994958341972,0.106691729694141,0,0.567515953566836,0.736423801007363,0,0,0.895260599125562,0.754773679776773,0.157265941855896,1.20130602011215,0.33946505990805,0.637724760305049,1.23935764259002,0,0,2.83902282004512,0,0,0,0.128458450192919,0,0.478901577171454,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0,0,0.183428598521679,0,0,0,0.397832444232549,0,0,0,3.40478702825849,0.327543835020193,0.443568258651136,0,0,0.206686796501184,0.19024743058172,0,0,0,0.527613733078862,0.383287282918786,0,0,0,0.227662191351298,0.0887023701626388,0.230467975111559,0.342976018874837,0.0679697329768317,0.0657727735628491,0.945550727071746,0.889851215136553,0.078493092850514,0.157115589916002,0.280272163313789,1.82631744101899,0.215927591218621,0.47775168788705,0.0714765441766563,1.10609528212909,1.85986280589,0.173858272302579,0,0.207216164163037,0.17071847709395,0,0.430227358820278,0.236664001461131,0,0.423387050190929,0,0,0.955538938977433,0.111855431797792,0.785201868921944,0.975343399858155,0,0.102662806856247,1.1598144313382,0,2.80727356154527,0.397901550322736,0.118920090777569,0.67767649223376,1.53916723443601,0.301925687133347,0.154348316215889,0.218559560503957,0.470317296361523,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0.399764623699716,0.71421575442263,0.352894871715692,0.160482733378337,0,0.458729283404541,0.143339583151451,0.473314686579554,0.0679914901909147,0.436350690340377,0.5290268405154,0,0.462175628631418,0,0.378499274505237,0.655593431782173,2.28057301820587,0.61193297845189,0,0.18378979906969,0.50141507858475,0,0.267964130156178,0.829169439458779,0,0.213233981900981,0.714193294391221,0,0.248298857183432,0.897054900644907,0,0.404234377916439,0,0,0.202056159043763,0,0.99798106963804,0.407016343054873,0.320182037633146,1.9307228228694,0.0898252021065869,0,0,2.03448089157869,0,0,0 | |||
|short_description=p@chr12:50390408..50390412,- | |||
}} |
Revision as of 13:23, 11 January 2014
Short description: | p@chr12:50390408..50390412, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:50390408..50390412, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.64e-09 | 2 |
erythroblast | 2.64e-09 | 2 |
megakaryocyte-erythroid progenitor cell | 2.64e-09 | 2 |
erythroid progenitor cell | 2.64e-09 | 2 |
reticulocyte | 2.64e-09 | 2 |
proerythroblast | 2.64e-09 | 2 |
basophilic erythroblast | 2.64e-09 | 2 |
polychromatophilic erythroblast | 2.64e-09 | 2 |
orthochromatic erythroblast | 2.64e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.07e-14 | 10 |
hematologic cancer | 1.50e-10 | 51 |
immune system cancer | 1.50e-10 | 51 |
cancer | 2.70e-09 | 235 |
disease of cellular proliferation | 5.86e-09 | 239 |
organ system cancer | 5.58e-08 | 137 |