FFCP PHASE1:Hg19::chr13:38145530..38145539,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10631 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16953 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=132bp_to_ENST00000497145_5end | |||
|coexpression_cluster_id=C349 | |||
|description=CAGE_peak_8_at_POSTN_5end | |||
|id=chr13:38145530..38145539,- | |||
|ontology_enrichment_celltype=CL:0000055!2.35e-20!180;CL:0000057!2.88e-19!75;CL:0002334!1.33e-12!12;CL:0002494!4.21e-10!16;CL:0000048!5.21e-10!430;CL:0000723!5.27e-10!436;CL:0000034!2.04e-09!444;CL:0002620!7.96e-09!23;CL:1000306!5.45e-08!4;CL:0002547!5.45e-08!4;CL:0000144!4.98e-07!625;CL:0002570!5.59e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:1000306;6.18e-13;4!CL:0002547;6.18e-13;4!CL:0000135;2.45e-08;3!CL:0000388;2.45e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,7.30e-13,4;CL:0002547,7.30e-13,4;CL:0000057,1.78e-09,76;CL:0000135,1.70e-08,3;CL:0000388,1.70e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.05e-11!14;DOID:17!3.91e-08!5;DOID:450!3.91e-08!5;DOID:66!3.91e-08!5;DOID:423!3.91e-08!5;DOID:0080000!3.91e-08!5;DOID:11722!3.91e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:2394;8.87e-10;14!DOID:3369;5.40e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.10e-09,14;DOID:3369,5.26e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000948!1.46e-08!24;UBERON:0005498!1.46e-08!24;UBERON:0004140!1.46e-08!24;UBERON:0009881!1.46e-08!24;UBERON:0004141!1.46e-08!24;UBERON:0003084!1.46e-08!24;UBERON:0007005!1.46e-08!24;UBERON:0004139!1.46e-08!24;UBERON:0004291!1.46e-08!24;UBERON:0000415!5.45e-08!4;UBERON:0007240!5.45e-08!4;UBERON:0005742!5.45e-08!4;UBERON:0005734!5.45e-08!4;UBERON:0004664!5.45e-08!4;UBERON:0004663!5.45e-08!4;UBERON:0007100!2.89e-07!27;UBERON:0004872!5.30e-07!84;UBERON:0002199!7.33e-07!45;UBERON:0002416!7.33e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;6.18e-13;4!UBERON:0000415;6.18e-13;4!UBERON:0007240;6.18e-13;4!UBERON:0005742;6.18e-13;4!UBERON:0005734;6.18e-13;4!UBERON:0004664;6.18e-13;4!UBERON:0004663;6.18e-13;4!UBERON:0007846;2.45e-08;3!UBERON:0000043;2.45e-08;3!UBERON:0007845;2.45e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,7.30e-13,4;UBERON:0007240,7.30e-13,4;UBERON:0005742,7.30e-13,4;UBERON:0005734,7.30e-13,4;UBERON:0004664,7.30e-13,4;UBERON:0004663,7.30e-13,4;UBERON:0007846,1.70e-08,3;UBERON:0000043,1.70e-08,3;UBERON:0007845,1.70e-08,3;UBERON:0004797,1.51e-07,7;UBERON:0007029,9.79e-07,1 | |||
|phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.383587685530591,1.0843174571537,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0,2.48485975847659,1.13967460498122,0.662045904066094,4.87622255272983,1.41867352879343,0.560677600142307,0,1.48000529050296,0,0.67355336034844,0.653847612453835,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36118619792025,0.538168907066586,0.427114777637135,0.211931901159562,1.80054657650641,0.412210116953756,1.28820270022815,0.37223371266318,0,0.0974370051611986,1.26216887122057,0.276149695926898,0,1.42003837006646,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,2.08014873822732,0,0,0,0,0,0,0.325736184293735,0,0,1.80863626235752,0,12.5965968889392,0,0,0,0.718874566474748,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,1.07057393278297,0.630809660135739,0,0,0,1.03473071292505,3.32112799267718,0,0,0,0,0,0,0,0,0,0,0.992431231275107,0.920771839728375,2.24528075546459,0.768834895534206,0.511707249066704,2.73451665944133,0,0.308419387605311,0.532685175939381,0.0821271560138091,0,0.813472649219715,0,0.200506470303285,0,0.229628896329213,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.275673144969061,0,0,0.170453254832202,0.801288320820636,0.330569830721956,0,0,0,0.464845549297286,1.25924938732256,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0.243713489631284,0,0.409499734223957,5.93902814205594,0,0,0.66343897524122,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.701139929541673,0.554805861502613,0,0.50313580350515,0,0.228840068396924,0,0.15543720058278,0.147855149989634,0,0.449803112163605,1.08684069813382,0.414706207840855,2.65841714557995,3.1304703708704,0.901545653983311,5.71207818253193,0,0.545545977607678,0.966695013382396,0,1.19428766609585,0,0.686791410365586,1.6837474438296,0,0,0,0,5.44094221229454,0,0.489473409012935,0.358177682162975,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,1.62737995515375,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35941691750254,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,3.34795516350076,0.924351257262837,1.73050624849516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@POSTN | |||
}} |
Revision as of 17:22, 11 January 2014
Short description: | p8@POSTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_POSTN_5end |
Coexpression cluster: | C349_Mesothelial_Fibroblast_Preadipocyte_Ewing_mesenchymal_Skeletal_Smooth |
Association with transcript: | 132bp_to_ENST00000497145_5end |
EntrezGene: | POSTN |
HGNC: | 16953 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 7.30e-13 | 4 |
fibroblast of the aortic adventitia | 7.30e-13 | 4 |
fibroblast | 1.78e-09 | 76 |
fibrocyte | 1.70e-08 | 3 |
tendon cell | 1.70e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
artery wall | 7.30e-13 | 4 |
tunica adventitia of artery | 7.30e-13 | 4 |
adventitia | 7.30e-13 | 4 |
tunica adventitia of blood vessel | 7.30e-13 | 4 |
aorta tunica adventitia | 7.30e-13 | 4 |
aorta wall | 7.30e-13 | 4 |
dense regular connective tissue | 1.70e-08 | 3 |
tendon | 1.70e-08 | 3 |
regular connective tissue | 1.70e-08 | 3 |
blood vessel layer | 1.51e-07 | 7 |
surface | 9.79e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.10e-09 | 14 |
peripheral primitive neuroectodermal tumor | 5.26e-07 | 1 |