FFCP PHASE1:Hg19::chr14:24732759..24732782,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7051 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11777 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-13bp_to_ENST00000560226_5end | |||
|description=CAGE_peak_5_at_TGM1_5end | |||
|id=chr14:24732759..24732782,- | |||
|ontology_enrichment_celltype=CL:0002076!1.25e-20!43;CL:0000223!4.01e-18!59;CL:0002368!1.27e-13!13;CL:0000066!1.54e-12!254;CL:0000622!3.27e-12!5;CL:0000154!4.21e-10!6;CL:0000150!4.41e-09!9;CL:0002251!5.54e-09!21;CL:0000039!1.25e-08!7;CL:0000586!1.25e-08!7;CL:0002328!1.31e-08!3;CL:0000076!5.29e-08!62;CL:0002623!9.49e-08!3;CL:0002579!1.44e-07!3;CL:0002202!5.56e-07!9;CL:0002632!5.56e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000575;7.45e-16;2!CL:0002328;1.31e-10;3!CL:0002577;2.37e-10;3!CL:0002368;5.61e-09;13!CL:0002159;1.47e-08;14!CL:0002202;1.03e-07;9!CL:0002632;1.03e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,8.04e-16,2;CL:0002328,1.05e-10,3;CL:0002577,3.16e-10,3;CL:0002368,7.01e-09,13;CL:0002159,1.40e-08,14;CL:0002202,1.08e-07,9;CL:0002632,1.08e-07,9;CL:0002077,3.41e-07,34 | |||
|ontology_enrichment_development_v019=UBERON:0009143;6.49e-09;1 | |||
|ontology_enrichment_disease=DOID:1749!1.36e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1799;2.20e-08;1!DOID:10165;2.20e-08;1!DOID:178;2.20e-08;1!DOID:326;2.20e-08;1!DOID:3978;2.20e-08;1!DOID:3394;2.20e-08;1!DOID:5844;2.20e-08;1!DOID:1798;2.20e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.13e-08,1;DOID:10165,2.13e-08,1;DOID:1798,2.13e-08,1;DOID:178,3.06e-08,1;DOID:326,3.06e-08,1;DOID:3978,3.06e-08,1;DOID:3394,3.06e-08,1;DOID:5844,3.06e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.71e-13!72;UBERON:0004119!3.02e-12!169;UBERON:0000925!3.02e-12!169;UBERON:0006595!3.02e-12!169;UBERON:0000166!2.46e-09!21;UBERON:0000077!2.91e-09!130;UBERON:0000065!1.15e-08!53;UBERON:0004815!1.31e-08!3;UBERON:0002031!1.31e-08!3;UBERON:0001041!1.98e-08!98;UBERON:0000165!6.57e-08!28;UBERON:0000930!6.57e-08!28;UBERON:0007196!8.74e-08!14;UBERON:0001558!8.74e-08!14;UBERON:0001007!1.16e-07!155;UBERON:0001555!1.16e-07!155;UBERON:0007026!1.16e-07!155;UBERON:0000464!1.78e-07!104;UBERON:0005795!3.45e-07!22;UBERON:0000466!4.84e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.31e-10;3!UBERON:0002031;1.31e-10;3!UBERON:0002372;2.20e-08;1!UBERON:0000997;2.20e-08;1!UBERON:0005056;2.20e-08;1!UBERON:0001961;2.20e-08;1!UBERON:0001744;2.20e-08;1!UBERON:0004176;2.20e-08;1!UBERON:0001042;2.20e-08;1!UBERON:0001735;2.20e-08;1!UBERON:0000964;2.29e-08;4!UBERON:0010409;2.29e-08;4!UBERON:0001987;5.61e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.05e-10,3;UBERON:0002031,1.05e-10,3;UBERON:0002372,1.48e-08,1;UBERON:0001961,1.48e-08,1;UBERON:0001744,1.48e-08,1;UBERON:0001735,1.48e-08,1;UBERON:0000997,2.29e-08,1;UBERON:0005056,2.29e-08,1;UBERON:0000964,2.38e-08,4;UBERON:0010409,2.38e-08,4;UBERON:0004348,2.38e-08,4;UBERON:0005427,2.38e-08,4;UBERON:0001987,6.95e-08,4;UBERON:0004340,6.95e-08,4;UBERON:0002185,9.43e-07,5 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,1.50602959389125,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18577172975525,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24803506515239,0,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,1.21251028578504,0,1.20956117331872,0.248107807818777,0,0,0.640695746278505,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,1.84161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.976135183992909,0,0,0,1.72279661398852,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0.384380134730212,0.127612712494584,1.0115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865999014529609,0,1.08890984861323,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0.435753854075961,2.23077990845765,0.307801034015188,0,1.1528195219403,0.987334088507493,7.49666866261856,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,1.27390116638691,0,0,0,0,0.146178634172371,0,3.78257164304836,0,0,0,0,0,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0,1.41416420770077,0,0,0,0,0,0,0,0,0,0,0,0,1.19807400299395,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0.2249738915515,0,0,0.670869375198532,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55336503108073,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.617602894321944,0,0,0.192914038270915,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95831310807222,1.24415452006595,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.550285795565037,0,0,0,0,0,0,0,1.30953347240711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,1.96190514319652,0,0,0,0,0,0,0,0,0.414432328326074,0.17071847709395,1.38251932362818,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,2.85686301769052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0.26721740526556,0,0,0,0,0,0,1.0661699095049,0,0,0.0620747142958579,0,0,0,5.22520194952707,0.342233301085281,1.75115337837928,0.286888821570705,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p5@TGM1 | |||
}} |
Revision as of 19:28, 11 January 2014
Short description: | p5@TGM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TGM1_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000560226_5end |
EntrezGene: | TGM1 |
HGNC: | 11777 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 8.04e-16 | 2 |
bronchial epithelial cell | 1.05e-10 | 3 |
placental epithelial cell | 3.16e-10 | 3 |
respiratory epithelial cell | 7.01e-09 | 13 |
general ecto-epithelial cell | 1.40e-08 | 14 |
epithelial cell of tracheobronchial tree | 1.08e-07 | 9 |
epithelial cell of lower respiratory tract | 1.08e-07 | 9 |
ecto-epithelial cell | 3.41e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.05e-10 | 3 |
epithelium of bronchus | 1.05e-10 | 3 |
tonsil | 1.48e-08 | 1 |
mucosa-associated lymphoid tissue | 1.48e-08 | 1 |
lymphoid tissue | 1.48e-08 | 1 |
tonsillar ring | 1.48e-08 | 1 |
mammalian vulva | 2.29e-08 | 1 |
external female genitalia | 2.29e-08 | 1 |
cornea | 2.38e-08 | 4 |
eye surface | 2.38e-08 | 4 |
optic eminence | 2.38e-08 | 4 |
corneal primordium | 2.38e-08 | 4 |
placenta | 6.95e-08 | 4 |
allantois | 6.95e-08 | 4 |
bronchus | 9.43e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.13e-08 | 1 |
endocrine pancreas cancer | 2.13e-08 | 1 |
pancreatic endocrine carcinoma | 2.13e-08 | 1 |
vascular disease | 3.06e-08 | 1 |
ischemia | 3.06e-08 | 1 |
extrinsic cardiomyopathy | 3.06e-08 | 1 |
myocardial ischemia | 3.06e-08 | 1 |
myocardial infarction | 3.06e-08 | 1 |