FFCP PHASE1:Hg19::chr17:7991075..7991086,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=242 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=430 | |||
|TSSclassifier=strong | |||
|UniProt=O75342 | |||
|association_with_transcript=-53bp_to_ENST00000319144_5end | |||
|coexpression_cluster_id=C197 | |||
|description=CAGE_peak_2_at_ALOX12B_5end | |||
|id=chr17:7991075..7991086,- | |||
|ontology_enrichment_celltype=CL:0001014!1.27e-13!2;CL:0001016!1.27e-13!2;CL:0000622!3.86e-12!5;CL:0000154!3.38e-10!6;CL:0002623!1.59e-09!3;CL:0002150!1.97e-09!3;CL:0000861!1.97e-09!3;CL:0000362!1.72e-07!8;CL:0000150!6.06e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002623;8.96e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,8.96e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.48e-12;2!UBERON:0010056;1.48e-12;2 | |||
|ontology_enrichment_disease=DOID:3151!6.37e-08!1;DOID:3149!6.37e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3151;5.13e-23;1!DOID:3149;5.13e-23;1!DOID:3451;3.24e-12;2!DOID:4159;3.24e-12;2!DOID:0060122;3.24e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.10e-23,1;DOID:3149,4.10e-23,1;DOID:3451,2.90e-12,2;DOID:4159,2.90e-12,2;DOID:0060122,2.90e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0001042!7.99e-16!10;UBERON:0009145!7.99e-16!10;UBERON:0006562!2.28e-14!11;UBERON:0000166!1.35e-10!21;UBERON:0000002!3.38e-10!6;UBERON:0001560!3.38e-10!6;UBERON:0003408!3.52e-10!10;UBERON:0001723!8.38e-10!3;UBERON:0001033!8.38e-10!3;UBERON:0010056!8.38e-10!3;UBERON:0000078!6.86e-09!18;UBERON:0001557!3.18e-08!19;UBERON:0007029!4.89e-08!1;UBERON:0002372!5.96e-08!1;UBERON:0001961!5.96e-08!1;UBERON:0001744!5.96e-08!1;UBERON:0001735!5.96e-08!1;UBERON:0000989!7.76e-08!1;UBERON:0008811!7.76e-08!1;UBERON:0006258!7.76e-08!1;UBERON:0005876!7.76e-08!1;UBERON:0004874!7.76e-08!1;UBERON:0000165!8.41e-08!28;UBERON:0000930!8.41e-08!28;UBERON:0000014!1.49e-07!4;UBERON:0001003!2.28e-07!14;UBERON:0007376!2.28e-07!14;UBERON:0007383!2.28e-07!14;UBERON:0000997!2.47e-07!1;UBERON:0005056!2.47e-07!1;UBERON:0001043!4.34e-07!4;UBERON:0009143!4.34e-07!4;UBERON:0002370!5.55e-07!4;UBERON:0005058!5.55e-07!4;UBERON:0009113!5.55e-07!4;UBERON:0003295!5.55e-07!4;UBERON:0005562!5.55e-07!4;UBERON:0008814!6.36e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.67e-30;3!UBERON:0001033;2.67e-30;3!UBERON:0005795;2.10e-23;1!UBERON:0007029;2.10e-23;1!UBERON:0002372;3.28e-23;1!UBERON:0001961;3.28e-23;1!UBERON:0001744;3.28e-23;1!UBERON:0001042;3.28e-23;1!UBERON:0001735;3.28e-23;1!UBERON:0000014;7.18e-23;4!UBERON:0000002;1.31e-15;6!UBERON:0001560;1.31e-15;6!UBERON:0000165;4.81e-13;28!UBERON:0006562;2.59e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,3.10e-30,3;UBERON:0001033,3.10e-30,3;UBERON:0010056,3.10e-30,3;UBERON:0007029,1.67e-23,1;UBERON:0002372,3.28e-23,1;UBERON:0001961,3.28e-23,1;UBERON:0001744,3.28e-23,1;UBERON:0001735,3.28e-23,1;UBERON:0000014,5.75e-23,4;UBERON:0001042,1.91e-20,10;UBERON:0009145,1.91e-20,10;UBERON:0006562,1.17e-18,11;UBERON:0000166,1.84e-16,22;UBERON:0000002,1.31e-15,6;UBERON:0001560,1.31e-15,6;UBERON:0000165,1.35e-12,29;UBERON:0000930,1.35e-12,29;UBERON:0001557,4.22e-11,19;UBERON:0000161,3.18e-10,36;UBERON:0005795,1.16e-09,22;UBERON:0003102,5.10e-08,99;UBERON:0001444,1.33e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.891547074219827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,5.71637351542273,1.15425387755696,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0.292357268344742,0.492692742319255,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,1.34173875039706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,7.60385627995501,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82853191670967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258355639344024,0.0620747142958579,0,0,0,12.6275713780238,1.02669990325584,2.42467390852515,0,0,0,0,0,0,0,0,5.2896503181046,0,0,0 | |||
|short_description=p2@ALOX12B | |||
}} |
Revision as of 13:45, 20 January 2014
Short description: | p2@ALOX12B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ALOX12B_5end |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | -53bp_to_ENST00000319144_5end |
EntrezGene: | ALOX12B |
HGNC: | 430 |
UniProt: | O75342 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 8.96e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
tongue | 3.10e-30 | 3 |
gustatory system | 3.10e-30 | 3 |
future tongue | 3.10e-30 | 3 |
surface | 1.67e-23 | 1 |
tonsil | 3.28e-23 | 1 |
mucosa-associated lymphoid tissue | 3.28e-23 | 1 |
lymphoid tissue | 3.28e-23 | 1 |
tonsillar ring | 3.28e-23 | 1 |
zone of skin | 5.75e-23 | 4 |
chordate pharynx | 1.91e-20 | 10 |
pharyngeal region of foregut | 1.91e-20 | 10 |
pharynx | 1.17e-18 | 11 |
oral opening | 1.84e-16 | 22 |
uterine cervix | 1.31e-15 | 6 |
neck of organ | 1.31e-15 | 6 |
mouth | 1.35e-12 | 29 |
stomodeum | 1.35e-12 | 29 |
upper respiratory tract | 4.22e-11 | 19 |
orifice | 3.18e-10 | 36 |
embryonic uterus | 1.16e-09 | 22 |
surface structure | 5.10e-08 | 99 |
subdivision of head | 1.33e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.10e-23 | 1 |
keratoacanthoma | 4.10e-23 | 1 |
skin carcinoma | 2.90e-12 | 2 |
skin cancer | 2.90e-12 | 2 |
integumentary system cancer | 2.90e-12 | 2 |