FFCP PHASE1:Hg19::chr17:39940532..39940541,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:39940532..39940541,- | |||
|id=chr17:39940532..39940541,- | |||
|ontology_enrichment_celltype=CL:0002076!2.64e-16!43;CL:0000066!4.38e-15!254;CL:0000223!3.42e-10!59;CL:0002159!1.31e-09!13;CL:0002368!7.93e-09!13;CL:0002251!8.50e-09!21;CL:0002328!1.80e-07!3;CL:0002077!2.57e-07!33;CL:0002621!7.07e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002159;7.02e-19;14!CL:0002328;6.53e-15;3!CL:0002166;6.53e-15;3!CL:0002252;8.17e-12;1!CL:0000244;2.02e-11;4!CL:0000731;2.02e-11;4!CL:0002076;4.80e-07;42!CL:0000575;9.42e-07;2!CL:0002077;9.70e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,7.45e-19,14;CL:0002328,3.00e-15,3;CL:0002166,5.68e-15,3;CL:0002252,1.19e-11,1;CL:0000244,3.07e-11,4;CL:0000731,3.07e-11,4;CL:0002076,1.53e-08,42;CL:0002077,1.05e-07,34;CL:0000575,8.93e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.50e-10!72;UBERON:0003729!2.81e-09!5;UBERON:0000065!8.88e-08!53;UBERON:0003343!1.37e-07!4;UBERON:0004785!1.37e-07!4;UBERON:0004119!1.43e-07!169;UBERON:0000925!1.43e-07!169;UBERON:0006595!1.43e-07!169;UBERON:0004815!1.80e-07!3;UBERON:0002031!1.80e-07!3;UBERON:0000166!3.19e-07!21;UBERON:0001949!7.07e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;6.53e-15;3!UBERON:0002031;6.53e-15;3!UBERON:0001708;2.02e-11;4!UBERON:0008895;2.02e-11;4!UBERON:0011159;2.57e-09;5!UBERON:0000365;2.57e-09;5!UBERON:0002185;2.57e-09;5!UBERON:0000486;2.04e-08;12!UBERON:0005910;6.59e-08;6!UBERON:0000485;6.77e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,3.00e-15,3;UBERON:0002031,3.00e-15,3;UBERON:0001708,1.82e-11,4;UBERON:0008895,1.82e-11,4;UBERON:0002185,1.62e-09,5;UBERON:0011159,2.36e-09,5;UBERON:0000365,3.59e-09,5;UBERON:0010188,6.16e-08,6;UBERON:0002539,6.16e-08,6;UBERON:0008816,6.16e-08,6;UBERON:0005910,8.71e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.90361775633475,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689491361473237,0,1.35426486594342,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0.736555271975129,2.53169909952708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0.175669571386252,0.0654895377488563,2.91436230634034,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,1.14721838155602,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,2.85350742062426,0,0.703702806881416,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34385702559088,1.41775097242386,0,0,0,0,0.088048434013226,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0.736647911487171,0,0,0,0.902399225814824,0.231046011313244,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,1.30012049207304,0,0,0,0,0,0,0,0,0,0.330569830721956,0.384380134730212,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.673554789078584,0,0,0,1.29151611801369,0,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,1.33732061132974,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.153900517007594,0,0,0,0,0.31900115973192,0,0,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0.685946781900644,0,0,0,0.0967563312890851,0,0.164230914106418,0.775912131907355,0,0,0,0,0,0.195551382734803,0,0,0,0.144090417154106,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,1.5476039091159,0,0.670869375198532,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699397538597222,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,1.41563668017288,0.366857197043358,0.115525666150338,0,0,0,0,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3414369541879,0,0,0,0,0,0,0,0,0.111855431797792,0,1.5849330247695,0,0,0,0.485710993059139,0,0,0,0.22589216407792,0.109940516745429,0,0,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0.653150243690884,0,0.336760265072938,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:39940532..39940541,- | |||
}} |
Revision as of 15:21, 20 January 2014
Short description: | p@chr17:39940532..39940541, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39940532..39940541, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 7.45e-19 | 14 |
bronchial epithelial cell | 3.00e-15 | 3 |
epithelial cell of Malassez | 5.68e-15 | 3 |
epithelial cell of esophagus | 1.19e-11 | 1 |
transitional epithelial cell | 3.07e-11 | 4 |
urothelial cell | 3.07e-11 | 4 |
endo-epithelial cell | 1.53e-08 | 42 |
ecto-epithelial cell | 1.05e-07 | 34 |
corneal epithelial cell | 8.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 3.00e-15 | 3 |
epithelium of bronchus | 3.00e-15 | 3 |
jaw skeleton | 1.82e-11 | 4 |
splanchnocranium | 1.82e-11 | 4 |
bronchus | 1.62e-09 | 5 |
primary subdivision of cranial skeletal system | 2.36e-09 | 5 |
urothelium | 3.59e-09 | 5 |
protuberance | 6.16e-08 | 6 |
pharyngeal arch | 6.16e-08 | 6 |
embryonic head | 6.16e-08 | 6 |
transitional epithelium | 8.71e-08 | 6 |