FFCP PHASE1:Hg19::chr17:55952035..55952049,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C535 | |||
|description=CAGE_peak_at_chr17:55952035..55952049,- | |||
|id=chr17:55952035..55952049,- | |||
|ontology_enrichment_celltype=CL:0000133!1.12e-10!59;CL:0002319!3.70e-09!25;CL:0000055!2.95e-08!180;CL:0000243!6.50e-08!15;CL:0000125!6.50e-08!15;CL:0000030!6.50e-08!15;CL:0000339!6.50e-08!15;CL:0000221!7.77e-08!71;CL:0000333!2.96e-07!41;CL:0000095!7.53e-07!17;CL:0000123!7.53e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.33e-30;5!CL:0002321;1.40e-10;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,9.22e-10,41;CL:0000133,7.10e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006238;4.30e-07;10!UBERON:0003056;5.97e-07;3 | |||
|ontology_enrichment_disease=DOID:3093!3.35e-08!11 | |||
|ontology_enrichment_disease_v019=DOID:169;1.97e-25;6!DOID:171;1.50e-15;10!DOID:3095;2.30e-12;22!DOID:2994;2.30e-12;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.14e-25,6;DOID:171,1.57e-15,10;DOID:3095,2.59e-12,22;DOID:2994,2.59e-12,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.33e-30;5!UBERON:0002410;2.33e-30;5!UBERON:0000010;3.34e-17;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.59e-30,5;UBERON:0002410,2.59e-30,5;UBERON:0000010,3.53e-17,8 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0.795285947051099,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.225222960966644,1.53316637465883,0,0,0,0,0,0.496971951695318,0,0.397227542439656,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469737994575059,0,0.140450806702248,0,0.245668634623536,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0.168776332241266,0,1.00973509697646,0,0,0,0.10075209822764,0,0,0,0,0.487894824518382,0.265059536642971,0.580969714347592,0.414644220061482,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0.178428988797162,0.630809660135739,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0.27470839445503,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0,0,0.62962469366128,0,0.308033580176089,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.294747123039363,0,0,0,0,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0.520874984799877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.209205692624666,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0.964518890790115,0.687697182986169,0.83088067605837,0,0,0,0,0,0,0.528001682597033,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,6.77908311187531,0.624902039810533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0.219284049578707,0.530067437837643,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,2.30209868346573,0.107824811396682,1.25812753484717,1.31051565830417,0.848662649770126,0,0.123935764259002,0,0,0,0,0,0,0,1.41696576325585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,6.47855808104179,0,1.56472445072321,0,0,0,0,0,0.118332000730565,0.340853619036631,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0.198950775161368,0,0,1.31928620094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0.788857810965923,0.135982980381829,0,0,0,0,0.432626562123789,0.504665699340316,0,1.0135880080915,0.407955318967927,0,0.18378979906969,0,0.0757786982182394,0.267964130156178,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:55952035..55952049,- | |||
}} |
Revision as of 16:28, 20 January 2014
Short description: | p@chr17:55952035..55952049, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:55952035..55952049, - |
Coexpression cluster: | C535_medulloblastoma_small_pineal_retinoblastoma_eye_Retinal_retina |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 9.22e-10 | 41 |
neurectodermal cell | 7.10e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.59e-30 | 5 |
autonomic nervous system | 2.59e-30 | 5 |
peripheral nervous system | 3.53e-17 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.14e-25 | 6 |
neuroectodermal tumor | 1.57e-15 | 10 |
germ cell and embryonal cancer | 2.59e-12 | 22 |
germ cell cancer | 2.59e-12 | 22 |