FFCP PHASE1:Hg19::chr19:39627378..39627388,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C159 | |||
|description=CAGE_peak_at_chr19:39627378..39627388,+ | |||
|id=chr19:39627378..39627388,+ | |||
|ontology_enrichment_celltype=CL:0000039!3.45e-26!7;CL:0000586!3.45e-26!7;CL:0000077!4.84e-17!19;CL:0002097!2.47e-11!2;CL:0000174!5.54e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.40e-29;7!CL:0000586;3.40e-29;7!CL:0002097;8.10e-26;2!CL:0000174;1.03e-17;3!CL:0000083;1.00e-13;4!CL:0000150;8.61e-07;9!CL:0000163;8.61e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.16e-29,7;CL:0000586,3.16e-29,7;CL:0002097,9.18e-26,2;CL:0000174,1.12e-17,3;CL:0000083,1.00e-13,4;CL:0000150,8.85e-07,9;CL:0000163,8.85e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1799!1.88e-21!1;DOID:10165!1.88e-21!1;DOID:1798!1.88e-21!1;DOID:170!2.33e-14!6;DOID:3095!8.47e-09!22;DOID:2994!8.47e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:1799;2.42e-50;1!DOID:10165;2.42e-50;1!DOID:1798;2.42e-50;1!DOID:170;9.08e-34;6!DOID:1793;1.00e-13;4!DOID:3095;4.43e-10;22!DOID:2994;4.43e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.42e-50,1;DOID:10165,2.42e-50,1;DOID:1798,2.42e-50,1;DOID:170,9.87e-34,6;DOID:1793,1.00e-13,4;DOID:3095,4.33e-10,22;DOID:2994,4.33e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0002369!5.54e-08!3;UBERON:0001235!5.54e-08!3;UBERON:0006858!5.54e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;1.03e-17;3!UBERON:0001235;1.03e-17;3!UBERON:0006858;1.03e-17;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.12e-17,3;UBERON:0001235,1.12e-17,3;UBERON:0006858,1.12e-17,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.14748103602986,1.6156375993759,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50109113962448,0.260994291965212,0,0,0,0,0.617602894321944,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.02385397307272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:39627378..39627388,+ | |||
}} |
Revision as of 23:11, 20 January 2014
Short description: | p@chr19:39627378..39627388, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:39627378..39627388, + |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.16e-29 | 7 |
germ cell | 3.16e-29 | 7 |
cortical cell of adrenal gland | 9.18e-26 | 2 |
steroid hormone secreting cell | 1.12e-17 | 3 |
epithelial cell of pancreas | 1.00e-13 | 4 |
glandular epithelial cell | 8.85e-07 | 9 |
endocrine cell | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 1.12e-17 | 3 |
adrenal cortex | 1.12e-17 | 3 |
adrenal/interrenal gland | 1.12e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.42e-50 | 1 |
endocrine pancreas cancer | 2.42e-50 | 1 |
pancreatic endocrine carcinoma | 2.42e-50 | 1 |
endocrine gland cancer | 9.87e-34 | 6 |
pancreatic cancer | 1.00e-13 | 4 |
germ cell and embryonal cancer | 4.33e-10 | 22 |
germ cell cancer | 4.33e-10 | 22 |