FFCP PHASE1:Hg19::chr19:50832869..50832882,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7376 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7965 | |||
|TSSclassifier=strong | |||
|UniProt=B3KRG6 | |||
|association_with_transcript=-66bp_to_ENST00000542413,uc002prv.3_5end | |||
|description=CAGE_peak_6_at_NR1H2_5end | |||
|id=chr19:50832869..50832882,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.17e-07!5;CL:0000080!8.10e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.65e-08;1!CL:0002553;5.77e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.65e-08,1;CL:0002553,3.83e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.55e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;1.65e-08;1!DOID:1799;2.35e-08;1!DOID:10165;2.35e-08;1!DOID:1798;2.35e-08;1!DOID:178;5.77e-08;1!DOID:326;5.77e-08;1!DOID:3978;5.77e-08;1!DOID:3394;5.77e-08;1!DOID:5844;5.77e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.65e-08,1;DOID:1799,2.52e-08,1;DOID:10165,2.52e-08,1;DOID:1798,2.52e-08,1;DOID:178,6.63e-08,1;DOID:326,6.63e-08,1;DOID:3978,6.63e-08,1;DOID:3394,6.63e-08,1;DOID:5844,6.63e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.71e-17!57;UBERON:0005068!6.71e-17!57;UBERON:0006241!6.71e-17!57;UBERON:0007135!6.71e-17!57;UBERON:0002346!5.21e-15!90;UBERON:0005743!5.31e-15!86;UBERON:0002616!1.14e-14!59;UBERON:0001017!2.19e-14!82;UBERON:0003075!2.30e-14!86;UBERON:0007284!2.30e-14!86;UBERON:0000073!7.25e-14!94;UBERON:0001016!7.25e-14!94;UBERON:0000955!1.17e-12!69;UBERON:0006238!1.17e-12!69;UBERON:0007023!1.33e-12!115;UBERON:0002780!1.61e-12!41;UBERON:0001890!1.61e-12!41;UBERON:0006240!1.61e-12!41;UBERON:0002020!2.24e-12!34;UBERON:0003528!2.24e-12!34;UBERON:0003080!4.74e-12!42;UBERON:0003056!3.12e-10!61;UBERON:0002791!4.26e-10!33;UBERON:0001893!1.22e-09!34;UBERON:0001869!2.11e-09!32;UBERON:0002619!1.97e-08!22;UBERON:0001950!2.94e-08!20;UBERON:0002308!8.83e-08!9;UBERON:0000125!8.83e-08!9;UBERON:0000956!5.17e-07!25;UBERON:0000203!5.17e-07!25;UBERON:0000924!5.74e-07!173;UBERON:0006601!5.74e-07!173;UBERON:0000153!5.88e-07!129;UBERON:0007811!5.88e-07!129;UBERON:0000033!8.44e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.65e-08;1!UBERON:0001301;1.97e-08;1!UBERON:0006834;5.77e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.65e-08,1;UBERON:0001301,2.04e-08,1;UBERON:0006834,4.11e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.232401601740905,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0.822335776043652,0.309706370895104,0,0.256160706529101,0,0.689491361473237,0.645484683583826,1.35426486594342,0,0,0,0,0.320929027076094,0,0,0,0,0,1.70215567407342,0.622822248995575,0,1.0429658368404,0,0,0.368277635987565,0.316462387440884,0.211255286311942,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.196468613246569,0,0,0,0,0,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.397589304964456,0.464775771478074,1.14027160516907,1.7662459561294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,2.37061319387782,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.320472213382419,5.77487913158015,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.849523652246594,0,0,0,0,0.307160702099232,0,0.140669416410513,0,0,0.211125408127993,0,0,0,0,0.123084805461069,0,0,0,1.02314474045374,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0.344743373241465,0,0,0.885741385813839,0.120596438625408,1.52581736317083,1.76926815889959,0.295547618953547,0.219385397153973,0,0,0.153900517007594,0,0.69169171316418,1.16684937732704,2.49888955420619,0,0,0.533034776018635,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0,0,0.889563386041866,0.370691816839509,0.417687798021821,0,0,0.234264445725339,0,0,0,0,0,1.22429104652196,0,0,0,0,0.330991955875499,0.313932918407225,0,0,0.138674673013139,0,0,0,3.14508002835654,0.171986032471617,0,0,0,0,0.176512253383001,0.677942222341597,0,0.19871461170299,0,0.391102765469606,0,0,0,0,0.343609788497747,0.857974989309823,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0.262887354279314,0,0.229160424011684,0,1.19807400299395,0,0,0.268733889946905,0,0,0.236349546921671,0.247247575143499,0.202210631562555,0,0.338693328263138,0,0.272406812223151,0.321506296930038,0.825236619583403,1.24632101408756,0,0,0.121499113316049,0,1.97014268247995,1.04909176269996,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.92562821219883,0,0,0.640724475406168,0.314408610199332,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0,0.250381861413,0,0.887432412294818,0.434674820589684,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,1.16916185303633,0.132864840313363,0.817826971279221,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0,0,0,0.247871528518004,0,0,0,1.60114149657094,0,0,0.192687675289379,0,0.319267718114302,0,1.00828678488687,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,2.3571602503328,0,0.147856086217045,0,0.781078098613847,0.620060389503552,0.253663240775627,1.09394961803644,0,0,0.527613733078862,0,0,0.336283722218824,0,0.455324382702595,0,0.115233987555779,0,0.339848664884159,0,0.118193840883968,0.111231401892069,0,0.157115589916002,0,0,0,0,0.357382720883282,1.26410889386181,1.3948971044175,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,10.5144105889925,0,0,0,0,0,0,0,3.18321240258189,0.237840181555137,0,0.109940516745429,1.05673990496671,0.0771741581079447,0,0,0,0,0,0.891139200981258,0,0,0,0.193373663920732,0,0,0,0,0,0.458729283404541,0.286679166302903,0.157771562193185,0.0679914901909147,1.74540276136151,0,0,0,0,0,0,0,0.101988829741982,0.534434810531121,0.459474497674225,0,0,0,0.829169439458779,0.517164979309476,0.213233981900981,0.23806443146374,0,0,0,0,0,0,0,0.336760265072938,0,0,0,0,0,0,0,1.58913877437726,0,0,0,0 | |||
|short_description=p6@NR1H2 | |||
}} |
Revision as of 00:37, 21 January 2014
Short description: | p6@NR1H2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NR1H2_5end |
Coexpression cluster: | NA |
Association with transcript: | -66bp_to_ENST00000542413, uc002prv.3_5end |
EntrezGene: | NR1H2 |
HGNC: | 7965 |
UniProt: | B3KRG6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.65e-08 | 1 |
lung fibroblast | 3.83e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.65e-08 | 1 |
epididymis | 2.04e-08 | 1 |
uterus or analog | 4.11e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.65e-08 | 1 |
islet cell tumor | 2.52e-08 | 1 |
endocrine pancreas cancer | 2.52e-08 | 1 |
pancreatic endocrine carcinoma | 2.52e-08 | 1 |
vascular disease | 6.63e-08 | 1 |
ischemia | 6.63e-08 | 1 |
extrinsic cardiomyopathy | 6.63e-08 | 1 |
myocardial ischemia | 6.63e-08 | 1 |
myocardial infarction | 6.63e-08 | 1 |