FFCP PHASE1:Hg19::chr2:83744957..83744980,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C84 | |||
|description=CAGE_peak_at_chr2:83744957..83744980,- | |||
|id=chr2:83744957..83744980,- | |||
|ontology_enrichment_celltype=CL:0000039!4.42e-47!7;CL:0000586!4.42e-47!7;CL:0002541!4.29e-13!3;CL:0002178!1.00e-12!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;9.48e-65;7!CL:0000586;9.48e-65;7!CL:0000083;2.26e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.12e-64,7;CL:0000586,1.12e-64,7;CL:0000083,2.26e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.81e-12;10!UBERON:0005564;2.81e-12;10 | |||
|ontology_enrichment_disease=DOID:3095!6.78e-20!22;DOID:2994!6.78e-20!22;DOID:4468!1.64e-19!2;DOID:0050687!6.93e-12!143;DOID:1799!9.84e-11!1;DOID:10165!9.84e-11!1;DOID:1798!9.84e-11!1;DOID:305!2.10e-10!106;DOID:299!5.31e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:1799;2.37e-29;1!DOID:10165;2.37e-29;1!DOID:1798;2.37e-29;1!DOID:3095;4.16e-21;22!DOID:2994;4.16e-21;22!DOID:4468;2.05e-15;2!DOID:1793;2.26e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.37e-29,1;DOID:10165,2.37e-29,1;DOID:1798,2.37e-29,1;DOID:3095,4.38e-21,22;DOID:2994,4.38e-21,22;DOID:4468,2.37e-15,2;DOID:0050687,6.71e-10,143;DOID:1793,2.26e-08,4;DOID:305,5.87e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.01e-18!8;UBERON:0003135!1.82e-13!11;UBERON:0000476!4.29e-13!3;UBERON:0000920!4.29e-13!3;UBERON:0003124!3.03e-12!7;UBERON:0001282!2.74e-10!1;UBERON:0009842!2.74e-10!1;UBERON:0003704!2.74e-10!1;UBERON:0001171!2.74e-10!1;UBERON:0001172!2.74e-10!1;UBERON:0000991!3.92e-07!21;UBERON:0009196!3.92e-07!21;UBERON:0009117!3.92e-07!21;UBERON:0005564!3.92e-07!21;UBERON:0004176!8.17e-07!22;UBERON:0003101!8.17e-07!22;UBERON:0000079!8.17e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.37e-15;8!UBERON:0003135;2.98e-11;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.69e-15,8;UBERON:0003135,3.14e-11,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,2.07507513949254,0.538545866458633,4.23724750495832,0.638002319463839,0,0.533034776018635,0,0,0,0,0,0,0,0,1.26598838716816,0.816164040795739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99226682220855,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0.19980960958213,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30953347240711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886889507080059,0.203977659483963,0,1.92979289023174,1.0028301571695,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:83744957..83744980,- | |||
}} |
Revision as of 04:08, 21 January 2014
Short description: | p@chr2:83744957..83744980, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:83744957..83744980, - |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.12e-64 | 7 |
germ cell | 1.12e-64 | 7 |
epithelial cell of pancreas | 2.26e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 4.69e-15 | 8 |
male reproductive organ | 3.14e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.37e-29 | 1 |
endocrine pancreas cancer | 2.37e-29 | 1 |
pancreatic endocrine carcinoma | 2.37e-29 | 1 |
germ cell and embryonal cancer | 4.38e-21 | 22 |
germ cell cancer | 4.38e-21 | 22 |
clear cell adenocarcinoma | 2.37e-15 | 2 |
cell type cancer | 6.71e-10 | 143 |
pancreatic cancer | 2.26e-08 | 4 |
carcinoma | 5.87e-07 | 106 |