FFCP PHASE1:Hg19::chr2:149895207..149895230,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130576 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27018 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NI32 | |||
|association_with_transcript=-1bp_to_ENST00000409876_5end | |||
|coexpression_cluster_id=C2661 | |||
|description=CAGE_peak_1_at_LYPD6B_5end | |||
|id=chr2:149895207..149895230,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.69e-13!254;CL:0002077!5.33e-09!33;CL:0002076!2.05e-08!43;CL:0002251!2.60e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002077;3.32e-10;34!CL:0000197;7.86e-09;6!CL:0000098;7.86e-09;6!CL:0002167;7.86e-09;6!CL:0002159;6.95e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.85e-15,253;CL:0002077,2.30e-11,34;CL:0000197,9.17e-09,6;CL:0000098,9.17e-09,6;CL:0002167,9.17e-09,6;CL:0002159,4.78e-08,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.72e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.54e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.44e-09,106;DOID:1749,1.66e-09,14;DOID:0050687,1.47e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.01e-10!365;UBERON:0004121!2.17e-10!169;UBERON:0003102!1.15e-09!95;UBERON:0000153!1.59e-09!129;UBERON:0007811!1.59e-09!129;UBERON:0000924!1.60e-09!173;UBERON:0006601!1.60e-09!173;UBERON:0000033!1.95e-09!123;UBERON:0000064!1.60e-08!219;UBERON:0001444!4.46e-08!48;UBERON:0004119!8.48e-08!169;UBERON:0000925!8.48e-08!169;UBERON:0006595!8.48e-08!169;UBERON:0000062!8.31e-07!511;UBERON:0002097!9.92e-07!40;UBERON:0007625!9.93e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0010371;3.52e-09;31!UBERON:0007625;3.69e-09;11!UBERON:0001456;5.30e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,4.22e-09,11;UBERON:0003102,2.83e-07,99;UBERON:0005085,6.96e-07,31 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0,0.737201809504527,0.697801167972428,2.62129646556207,0.527533956456907,0,0,0,0,0,0,0.123121058076788,0.408001382488506,0,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,2.66852776159066,0.426730222566507,0.800791974072025,1.14950487990897,0,0.954053754535364,1.1384259382189,0,0.764546456250458,0,0.560508562981536,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0.50133791063589,0.724232594804119,0,0,3.11964896641424,4.21285855178871,6.85111328406383,0.785874452986276,2.5500670180478,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.704606991862589,0.323745888736263,0.421352420106746,0,0,0,1.18800285728205,0.741800787835671,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0.919463387397059,0.150238058906597,0,2.51145489964407,5.12537733164562,0.635795703478686,0,0.103052529238439,2.83404594050192,4.28068769562657,0.506328996723799,0.487185025805993,0.252433774244115,1.10459878370759,0.161646056818812,1.42003837006646,4.33234022378853,0.339121184620975,0.773043412653187,1.09098448236334,0.286804595389004,0.121973706129595,0.530119073285941,0.929551542956147,0.414644220061482,0.504641701751257,1.82488679537915,0,1.92972281457866,2.76269842704961,0,0,0,0.168584690078102,0,0,0.217879444092406,0,0,0.392442930250692,0,0,0,0,0,0,0,0,0,1.47586126251736,8.57839051492628,1.86575485194663,1.1240175325762,1.91005047582099,0.925884451585296,0.325808305310325,0,8.6598805215164,0.927443239800615,5.51820862908362,0,0,0,7.90204397959275,8.58486162094873,0,0,0,1.87467667973554,3.35964256397719,4.67857820899875,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,1.42636905040718,1.44781306667579,0,1.79060963239896,0,0,0,0,0,1.30139853857622,0,0.335032530668698,0,0,0,0,0,0,0,4.36738809214695,7.49401752948079,15.7702415033935,7.73133338951907,0,0,0,0,0,0,0,0,0,0.647142602455851,0.106727557803444,0.606255142892519,4.99306318531491,2.11673205330776,0.248107807818777,0.153461973288062,0,0,1.02341449813341,0,0,0,0,0,0,0,6.28469137876436,0.40101294060657,6.90607417019222,0.229628896329213,0,0,0.902399225814824,0.616122696835318,0,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,2.82095137628028,5.24823433119529,2.27764876265012,0.309123034943167,0.366277859273374,0.495056999523528,1.14853107599234,3.25030123018261,0,0.096670718292122,0,0,0,0,0,0,0,1.15699440752685,0.768760269460425,0.255225424989168,4.55210013849975,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.471249609382746,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0.430234056612155,1.47373561519682,0.7133421029625,0,0,0,0,0,0.673554789078584,2.01090682660736,0,0.0941438007767792,0.43050537267123,0,2.66058092122005,0.229723400206959,0,0,0,0,0.822724546172388,0,0,0,2.67060177818683,0,9.06648799129817,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0,0,23.6357039890313,5.93929361665277,12.5935887860685,0,0.281338832821026,0.111308705022906,0,0,1.39473591775749,0,0,0,0.861593638227486,3.73247505194169,0.0898683511473268,2.86433879480975,0,1.28236427328014,0,0,0,0.371072392647405,1.99613798001194,7.29197731038653,2.53633999988968,2.17499872630438,1.0241410345695,0.254253650292766,10.4010579977892,1.03423011972439,0,0.173624994933292,0,0.120596438625408,1.52581736317083,0,0.591095237907095,0.438770794307945,0,3.20674611840788,0.615602068030377,1.82307289355202,0.69169171316418,0.179515288819544,1.73835795075213,8.29403015302991,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,4.24059214301822,0.216388639742091,0.995261931078505,0.884575645033392,0,0,0,0,0.134802265961354,0,0,1.094728735294,4.69595085437015,0,6.31335044559025,6.04953580243319,0.91821828489147,0.379119477770928,0.150323419414493,1.65901106235595,0,0,0,0,0,0,23.2570049369075,7.25143740866395,1.13176968554523,0,0,0,0,0,0.775912131907355,0,0.225980740780532,1.09633539717401,0,0.759729551470544,3.32437350649165,0,8.75157278431345,0.599428828746391,7.34861127485941,0,0,0,10.3129604519309,2.12124631155116,0,0,9.58783245781425,0,0,0,0,2.57859264851974,0,0,0,0,5.39133301347276,0,0,0,0,1.16495949527454,0,0,0,6.69306874300292,0,3.18091875923721,0.817220436669454,0.964518890790115,0.550157746388935,1.24632101408756,0.674921674654501,7.7380195455795,0.242998226632099,6.03782437678679,1.02447419488958,1.67854682031994,0,0,6.90894710350003,0,0,0,0,0,0,0,0,0.340776043570843,3.39936274560377,0.146552233678082,0,0.387848869084652,0.52893040697076,0,9.16259529011673,0.320362237703084,1.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| |||
|short_description=p1@LYPD6B | |||
}} |
Revision as of 05:54, 21 January 2014
Short description: | p1@LYPD6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LYPD6B_5end |
Coexpression cluster: | C2661_amniotic_endometrioid_squamous_Olfactory_rectal_stomach_bronchogenic |
Association with transcript: | -1bp_to_ENST00000409876_5end |
EntrezGene: | LYPD6B |
HGNC: | 27018 |
UniProt: | Q8NI32 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.85e-15 | 253 |
ecto-epithelial cell | 2.30e-11 | 34 |
receptor cell | 9.17e-09 | 6 |
sensory epithelial cell | 9.17e-09 | 6 |
olfactory epithelial cell | 9.17e-09 | 6 |
general ecto-epithelial cell | 4.78e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 4.22e-09 | 11 |
surface structure | 2.83e-07 | 99 |
ectodermal placode | 6.96e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.44e-09 | 106 |
squamous cell carcinoma | 1.66e-09 | 14 |
cell type cancer | 1.47e-07 | 143 |