FFCP PHASE1:Hg19::chr2:220309819..220309833,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10290 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16901 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-439bp_to_ENST00000497065_5end | |||
|coexpression_cluster_id=C1894 | |||
|description=CAGE_peak_26_at_SPEG_5end | |||
|id=chr2:220309819..220309833,+ | |||
|ontology_enrichment_celltype=CL:0000077!4.66e-13!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.10e-41;19!CL:0002097;1.75e-12;2!CL:0000174;9.31e-09;3!CL:0000346;1.30e-08;3!CL:1000428;1.30e-08;3!CL:0000213;1.89e-08;58!CL:0000215;1.89e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,9.54e-42,19;CL:0000213,9.05e-14,58;CL:0000215,9.05e-14,58;CL:0000076,1.12e-12,63;CL:0002097,1.85e-12,2;CL:0000174,9.66e-09,3;CL:0000346,1.21e-08,3;CL:1000428,1.21e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;9.10e-07;4!UBERON:0007284;9.10e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.05e-08!115;UBERON:0000200!9.55e-08!6;UBERON:0002771!2.20e-07!3;UBERON:0001896!3.04e-07!3;UBERON:0005290!3.04e-07!3;UBERON:0010096!3.04e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002146;4.10e-23;1!UBERON:0005623;4.10e-23;1!UBERON:0002369;9.31e-09;3!UBERON:0001235;9.31e-09;3!UBERON:0006858;9.31e-09;3!UBERON:0003978;1.30e-08;3!UBERON:0000946;1.30e-08;3!UBERON:0000412;1.30e-08;3!UBERON:0001992;1.30e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,5.13e-23,1;UBERON:0005623,5.13e-23,1;UBERON:0002369,9.66e-09,3;UBERON:0001235,9.66e-09,3;UBERON:0006858,9.66e-09,3;UBERON:0000412,1.21e-08,3;UBERON:0001992,1.21e-08,3;UBERON:0003978,1.40e-08,3;UBERON:0009751,1.40e-08,3;UBERON:0000946,1.40e-08,3;UBERON:0002523,1.40e-08,3;UBERON:0005983,1.40e-08,3;UBERON:0002165,1.40e-08,3;UBERON:0002062,1.40e-08,3;UBERON:0007280,1.40e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,1.74306691720059,3.79897366491817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,1.14580212005842,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,1.14241563650639,0,0,0,0,0,0,0,0,0,0,3.43106546199881,2.08795433572169,0,0,0,0.537266523244462,0,0,0,6.94490537775293,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p26@SPEG | |||
}} |
Revision as of 08:48, 21 January 2014
Short description: | p26@SPEG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_SPEG_5end |
Coexpression cluster: | C1894_mesothelioma_Mesothelial_aorta_mesenchymal_pleomorphic_heart_leiomyoma |
Association with transcript: | -439bp_to_ENST00000497065_5end |
EntrezGene: | SPEG |
HGNC: | 16901 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 9.54e-42 | 19 |
lining cell | 9.05e-14 | 58 |
barrier cell | 9.05e-14 | 58 |
squamous epithelial cell | 1.12e-12 | 63 |
cortical cell of adrenal gland | 1.85e-12 | 2 |
steroid hormone secreting cell | 9.66e-09 | 3 |
hair follicle dermal papilla cell | 1.21e-08 | 3 |
stem cell of epidermis | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 5.13e-23 | 1 |
semi-lunar valve | 5.13e-23 | 1 |
adrenal gland | 9.66e-09 | 3 |
adrenal cortex | 9.66e-09 | 3 |
adrenal/interrenal gland | 9.66e-09 | 3 |
dermal papilla | 1.21e-08 | 3 |
papillary layer of dermis | 1.21e-08 | 3 |
valve | 1.40e-08 | 3 |
cardiac mesenchyme | 1.40e-08 | 3 |
cardial valve | 1.40e-08 | 3 |
tunica intima | 1.40e-08 | 3 |
heart layer | 1.40e-08 | 3 |
endocardium | 1.40e-08 | 3 |
endocardial cushion | 1.40e-08 | 3 |
presumptive endocardium | 1.40e-08 | 3 |