FFCP PHASE1:Hg19::chr3:5024588..5024609,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:5024588..5024609,+ | |||
|id=chr3:5024588..5024609,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000244;2.85e-11;4!CL:0000731;2.85e-11;4!CL:0000307;7.05e-09;3!CL:0000623;1.85e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,8.54e-12,4;CL:0000731,8.54e-12,4;CL:0000068,8.85e-09,3;CL:0000069,8.85e-09,3;CL:0000307,8.85e-09,3;CL:0000377,8.85e-09,3;CL:0000623,1.12e-08,3;CL:0000825,1.12e-08,3;CL:0002368,8.49e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000377;7.05e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;5.26e-09;5!UBERON:0005631;1.33e-08;10!UBERON:0000158;1.33e-08;10!UBERON:0005910;1.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.04e-09,5;UBERON:0005910,7.89e-08,6 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0.436882744260345,1.05506791291381,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0.251085279189606,0.61130724598361,0.57470412614962,0.393553906568396,0.393364276848904,0,0.309632246632152,0,0.90361775633475,0,0,0,0,1.10799081706375,2.60707781711184,2.17010870715852,0,0,0,0.145398238779565,0,0.242584061187816,0.697287110717054,0.411167888021826,0.309706370895104,0.28769239232215,0.512321413058201,1.6553756092201,0.689491361473237,0,0,0.376484679085209,1.36453075028923,0.674170453335254,1.53041946185451,0.320929027076094,0,0.659702600373432,0.598390972864896,0.852449501065388,0.580418477257168,0,0.622822248995575,0.75374599577023,1.0429658368404,0.434377689410233,0,0.736555271975129,0.316462387440884,0.211255286311942,0.212604299965044,0,0.112328631146495,0.150176892841506,0.48217676009124,0,0.19891667719909,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0.382273228125229,0,0,0,0,0.393010762749165,0.616804496998528,0,0,0,0,1.00269411196656,0,0,0,0.384273959177026,0.130059347559878,0,0.276350017785848,0.579606171470105,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.80642697289893,3.4767225451856,1.30341963494519,0,0,0.12786256184353,0,0,0.724232594804119,0,2.91980922181582,0.283604451492204,0.886917589850256,0.351339142772504,0.458426764241994,0.364295288292542,0,0,0,0.132957960518865,0.715471872916026,1.14398982156026,0.371457501329565,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0,0.379891534993739,0.397227542439656,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0.280901613404497,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0.169560592310488,1.15956511897978,0.545492241181669,0.573609190778008,0,0,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0.709840800239063,0.674338760312407,0.723033089650446,0.661763836394364,0.653638332277218,0.71181185733329,0,0,1.15424147083917,0,2.80483547606892,0,0,3.80265104465493,2.94848165003288,0,0,0,0.343135620597051,0.548751427043128,1.1240175325762,1.3068766413512,0.925884451585296,0,0,0,0.115930404975077,0.821860859650752,0,0,0,0,0,0.246217006087397,0.234004265139238,0.445893486866185,0,2.18376766658517,1.27597587518148,0.179117045405697,0.290633938513962,0.766765358330422,3.4486426652716,0.704387472105808,1.03664057770386,0.864719720501769,1.00993946741104,0,0,0,0,0.102827492703324,0.901029173531752,0.285826432630578,0,0,0,0.517086863031111,0,0,0.26593811658487,1.04007436911366,0,0,0,0.428933980974443,0.542621605391443,0,0,0.355391948742546,0,0,0,0.199945982364114,2.43247561282381,1.00451418286425,0,0.239624855491583,0,0,0,0,0,0.224170287987055,1.18218456121156,2.37190332345469,1.92514554419623,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.415941723061614,0.178428988797162,0.473107245101804,0.234282829985426,0,0,0,0,0.553107505625109,0,0,0,0,1.72571360654893,1.17400313583789,0.606255142892519,0,0,0,0,0,0.128139149255701,0,0.321707842287215,0,0.616838775210622,0.355123450626254,0,0,0,0,2.80709058424599,0.368323955743585,0,0.182091168006717,0.131124414959424,0.902399225814824,0.770153371044148,0,0,0.844413031143006,1.13733384070897,0.170093705276516,0,0,0.270946437543853,0.501689773854853,1.01950509218015,0.831076008928724,0,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0.183138929636687,0.165018999841176,1.14853107599234,1.30012049207304,0,0,0,0.614014698904518,0.137836572484531,0,0,0.0852266274161009,0.267096106940212,1.81813406897076,1.72971060628596,0.510450849978337,0.809262246844399,0,0.62962469366128,0,0.308033580176089,0.532306030317022,0,0,0,0,0,0,0,0,0,1.56989728039846,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0.281695602532241,0.286822704408103,0.196498082026242,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0,1.34710957815717,2.01090682660736,2.17781969722645,0.470719003883896,1.72202149068492,3.36942951335251,3.99087138183008,1.83778720165568,0,0,0,0,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0.962479855263359,0.490080431962063,0,0,0,0,0.399158742865633,0.191505370132367,0.211673582723883,0,0.280797178113459,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.561421621224659,0.73254089635947,0,0.891547074219827,0,1.19372242368845,0,1.22864280839693,0,0.703347082052564,0.111308705022906,0.659215496907038,0,0.796991953004279,0,0,0.102268682502155,0.123084805461069,0,0.359473404589307,1.07412704805365,0,0.986434056369336,0,0,0.969332746095218,0.649376687132959,0,0,0.699679999969566,0.724999575434793,0,1.27126825146383,0.945550727071745,0,0,0,0,0.361789315876224,0,0,0.295547618953547,0.8775415886158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| |||
|short_description=p@chr3:5024588..5024609,+ | |||
}} |
Revision as of 17:03, 21 January 2014
Short description: | p@chr3:5024588..5024609, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:5024588..5024609, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 8.54e-12 | 4 |
urothelial cell | 8.54e-12 | 4 |
duct epithelial cell | 8.85e-09 | 3 |
branched duct epithelial cell | 8.85e-09 | 3 |
tracheal epithelial cell | 8.85e-09 | 3 |
tracheoblast | 8.85e-09 | 3 |
natural killer cell | 1.12e-08 | 3 |
pro-NK cell | 1.12e-08 | 3 |
respiratory epithelial cell | 8.49e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.04e-09 | 5 |
transitional epithelium | 7.89e-08 | 6 |