FFCP PHASE1:Hg19::chr3:39234074..39234095,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=165904 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14301 | |||
|TSSclassifier=strong | |||
|UniProt=Q702N8 | |||
|association_with_transcript=0bp_to_ENST00000340369,ENST00000396251,ENST00000421646,NM_001198621,NM_194293,uc003cji.2,uc003cjj.2,uc003cjk.1_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_1_at_XIRP1_5end | |||
|id=chr3:39234074..39234095,- | |||
|ontology_enrichment_celltype=CL:0000188!1.28e-10!9 | |||
|ontology_enrichment_celltype_v019=CL:0000188;4.75e-16;9!CL:0000680;8.72e-12;7!CL:0000056;1.43e-09;4!CL:0000515;8.72e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,5.39e-16,9;CL:0000515,1.50e-09,4 | |||
|ontology_enrichment_development_v019=CL:0000515;1.43e-09;4!UBERON:0005062;6.40e-07;4!UBERON:0007284;6.40e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.27e-19!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;7.04e-32;16!UBERON:0002036;7.04e-32;16!UBERON:0002385;2.81e-14;31!UBERON:0001015;2.81e-14;31!UBERON:0000383;2.81e-14;31!UBERON:0004151;3.71e-09;3!UBERON:0003978;3.81e-09;3!UBERON:0000946;3.81e-09;3!UBERON:0007100;2.40e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.01e-10,114;UBERON:0004151,3.71e-09,3;UBERON:0003978,3.81e-09,3;UBERON:0009751,3.81e-09,3;UBERON:0000946,3.81e-09,3;UBERON:0002523,3.81e-09,3;UBERON:0005983,3.81e-09,3;UBERON:0002165,3.81e-09,3;UBERON:0002062,3.81e-09,3;UBERON:0007280,3.81e-09,3 | |||
|phase1_expression=2.18014055124668,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246301768349837,0.157421562627358,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,16.6861587546847,16.9066066309206,24.5941519084129,0,0.645484683583826,2.70852973188684,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0.426224750532694,0.290209238628584,1.13477044938228,0,16.8336605722018,25.0311800841697,33.6642709292931,3.63239701580021,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45990461090791,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0.337552664482532,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0241773803446,0,11.7606969108434,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,1380.44239258443,0,0,0,0,0.317489471460845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,3.04040744001916,6.78071864416265,6.62525563987614,0,0.197030760201927,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0.195801157462741,38.4320634668159,0,0,0,0,0,0,1.48864684691266,1.07423381301644,0,0.256278298511402,0,1.28683136914886,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,2.67906630284078,0,0,0.574265537996172,0,0,2.12675580242668,2.61882649094895,6.90766536267583,28.9456802217514,0.966782203814463,6.0907011443976,25.4827615974142,33.0308852249396,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0.949138274156178,0,0,0,0,0,0.179872457583315,0,0,0,0,0,1.46290121726877,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.6196469961995,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,2.54188262097304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.73937624650712,0,0,0,0,0,0,0,0,0,0,0,2.78947183551498,0.276283915531148,0,0,0.615424027305347,0,0,0,0,1.1837208676432,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87754158861589,0,0,0,0,0,0,0,0.638002319463839,0.0915975934018623,0,0,0.31396051279005,0.166211681900156,0,0,0.335643173951685,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,1.34802265961354,191.816057704411,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,12.2308667769421,0,0,0,0,10.4748137807493,0,21.4681703741506,0,0,0.886351143382302,0,0,0,0,0,0,6.17741992303072,0,0,0,0,0.209205692624666,0,0,0,0.136905378891993,0,0,16.0361286110382,166.173028756991,160.412296808179,1027.27629816942,255.189762637711,394.887964285645,518.873638552354,645.901904487386,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,2.32140586367385,0.485996453264197,0,0.157611414598396,0.629455057619977,0,0,0,120.068814830726,325.749249419792,0,0,0,0,0,0.082092520749339,0.170388021785422,0.113312091520126,0,0,0.258565912723101,0.66116300871345,0,0,1.17466153824464,1.57204305099666,0,0,0,0,0,0.544017803369474,0,0.306345576763462,0.327872630709804,0,0,0,0,0.573409195690071,0.443716206147409,2.54595252059672,0,0,0.454947352624943,0,0,0,0,0,0,0,0.947015026375446,1.50940741051545,0.889811221596536,0,0,0,0,0,0,0,0,0,1.5652351854352,0,0,0,0,0,1.85613503951397,0,45.6031651715995,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0.23658523500376,0,0,0,0.578063025868136,0,0.159633859057151,0,0.252071696221718,0.138314504928436,0.484426936895553,0,0,0,0,0,0.381382095467167,0,0.198916222116275,0.451261970095544,0.20170506870352,0,0,0,0,0.405225507710368,0,0,0.507326481551255,0.546974809018219,0,37.7120495575864,0,0,39.1062340191149,3.69912094440706,0.606965604236632,0.455324382702595,0.0887023701626388,0,0,0.815636795721981,0.591954962065642,0,0,0.549451649953598,0,0,0,0,0,0,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,606.640820445057,1252.89689487364,81.1870101936739,24.285549652957,0,0,0,0,0,0.150962843566674,0,0.437119121007915,0,0.245148321753905,0,0.196308467114945,0,1.6906229103336,0.339854229375634,0,1.54698931136585,0,0,0,0,0,9.17458566809082,0,0,0.815897882290976,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.682008283964155,0.267964130156178,0,0.103432995861895,74.6318936653433,30.7103116588225,1.0334225573761,2.29676442894674,2.80329656451534,27.4319252178891,23.6477111081117,107.769790208996,138.604486939539,15.8277324584281,5.1639987882727,63.2054677437425,0,0,0,0,107.934833505589,0,0,0,21.1337483270578,0.320568492303233 | |||
|short_description=p1@XIRP1 | |||
}} |
Revision as of 18:17, 21 January 2014
Short description: | p1@XIRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_XIRP1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_ENST00000340369, ENST00000396251, ENST00000421646, NM_001198621, NM_194293, uc003cji.2, uc003cjj.2, uc003cjk.1_5end |
EntrezGene: | XIRP1 |
HGNC: | 14301 |
UniProt: | Q702N8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 5.39e-16 | 9 |
skeletal muscle myoblast | 1.50e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.01e-10 | 114 |
cardiac chamber | 3.71e-09 | 3 |
valve | 3.81e-09 | 3 |
cardiac mesenchyme | 3.81e-09 | 3 |
cardial valve | 3.81e-09 | 3 |
tunica intima | 3.81e-09 | 3 |
heart layer | 3.81e-09 | 3 |
endocardium | 3.81e-09 | 3 |
endocardial cushion | 3.81e-09 | 3 |
presumptive endocardium | 3.81e-09 | 3 |