FFCP PHASE1:Hg19::chr3:55205086..55205090,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C373 | |||
|description=CAGE_peak_at_chr3:55205086..55205090,- | |||
|id=chr3:55205086..55205090,- | |||
|ontology_enrichment_celltype=CL:0000594!1.90e-09!3;CL:0000515!1.30e-07!4;CL:0002620!4.39e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002535;1.55e-98;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.55e-98,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3112!5.05e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:4362;1.48e-40;5!DOID:1749;1.43e-15;14!DOID:120;8.32e-09;27!DOID:193;2.67e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.48e-40,5;DOID:1749,1.43e-15,14;DOID:120,8.32e-09,27;DOID:193,2.67e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.34e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.55e-98;2!UBERON:0004801;1.55e-98;2!UBERON:0000002;4.27e-34;6!UBERON:0001560;4.27e-34;6!UBERON:0000995;4.22e-13;17!UBERON:0003975;1.85e-12;18!UBERON:0004175;6.74e-11;21!UBERON:0003134;2.32e-07;33!UBERON:0003133;2.32e-07;44!UBERON:0000474;2.32e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.55e-98,2;UBERON:0004801,1.55e-98,2;UBERON:0000002,4.27e-34,6;UBERON:0001560,4.27e-34,6;UBERON:0000995,6.74e-11,21;UBERON:0005795,1.80e-10,22;UBERON:0003975,1.80e-10,22;UBERON:0004175,2.15e-09,25;UBERON:0003134,8.21e-07,37;UBERON:0000474,8.21e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91530254476886,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:55205086..55205090,- | |||
}} |
Revision as of 19:18, 21 January 2014
Short description: | p@chr3:55205086..55205090, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:55205086..55205090, - |
Coexpression cluster: | C373_epidermoid_Prostate_cord_squamous_testicular_pharyngeal_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.55e-98 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.55e-98 | 2 |
cervix epithelium | 1.55e-98 | 2 |
uterine cervix | 4.27e-34 | 6 |
neck of organ | 4.27e-34 | 6 |
uterus | 6.74e-11 | 21 |
embryonic uterus | 1.80e-10 | 22 |
internal female genitalia | 1.80e-10 | 22 |
internal genitalia | 2.15e-09 | 25 |
female reproductive organ | 8.21e-07 | 37 |
female reproductive system | 8.21e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.48e-40 | 5 |
squamous cell carcinoma | 1.43e-15 | 14 |
female reproductive organ cancer | 8.32e-09 | 27 |
reproductive organ cancer | 2.67e-08 | 29 |