FFCP PHASE1:Hg19::chr3:100553556..100553602,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C404 | |||
|description=CAGE_peak_at_chr3:100553556..100553602,- | |||
|id=chr3:100553556..100553602,- | |||
|ontology_enrichment_celltype=CL:0000057!1.21e-08!75;CL:0002620!2.89e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000569;1.02e-09;4!CL:0000135;3.15e-07;3!CL:0000388;3.15e-07;3!CL:0000197;4.35e-07;6!CL:0000098;4.35e-07;6!CL:0002167;4.35e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,1.03e-09,4;CL:0000011,1.03e-09,4;CL:0000135,3.00e-07,3;CL:0000388,3.00e-07,3;CL:0000197,4.81e-07,6;CL:0000098,4.81e-07,6;CL:0002167,4.81e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000011;1.02e-09;4 | |||
|ontology_enrichment_disease=DOID:2394!1.43e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.97e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;3.15e-07;3!UBERON:0000043;3.15e-07;3!UBERON:0007845;3.15e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004797,2.60e-08,7;UBERON:0007846,3.00e-07,3;UBERON:0000043,3.00e-07,3;UBERON:0007845,3.00e-07,3 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0,0,0,2.01697543935533,1.20538905604795,1.46062018077475,1.46379839637152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5660528763061,0,5.64901423947212,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0.550236083880135,0,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,0,0,0,5.4666914686485,1.01304409331664,11.7844170923765,2.0078563452417,0,0.560677600142307,0,1.48000529050296,0.311211035399766,0,0,0,0,0,0,0,1.94283284717341,0.352303495931295,0.485618833104395,0.280901613404497,0,0,0.723280468230358,0,0.494533858557114,0,0,0,0.250237039743928,0,0,0.919463387397059,1.95309476578576,0,2.51145489964407,1.2813443329114,0.847727604638247,0.600182192168805,0,2.06112432036503,0.558350568994769,0.843881661206331,0,1.26216887122057,0.0920498986422993,0.80823028409406,1.06502877754984,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,1.03993478527958,0,0,0,0.866198686566443,4.1668696131895,2.47330397904978,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0.301439377059586,0,0.099972991182057,0,0,0,1.4377491329495,1.14861935834114,0,3.18518874668674,0.61642896765115,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,5.40724239980099,5.70972764150918,5.04647728108591,4.09994952474496,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0.256278298511402,0,0.321707842287215,0,0,0.710246901252508,0.246381468041427,0.519254429183621,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,9.64103579064957,0.386682873168488,0,0,0.275673144969061,0.107420244868274,0.145016693914229,0.170453254832202,0.267096106940212,0,0,0.127612712494584,0,0.464845549297286,5.66662224295152,0,0,0,0,0.37064843820784,0.143124886741991,0,0,0,0.255897791311334,0,0.636406495851874,0.78494864019923,0,0,0.117812402345686,0.404364963146632,0,0,0,8.04254515783239,0,0,0,1.13008116620243,0,1.32687795048244,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,5.9110137883346,14.8182701831956,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,1.19372242368845,0.296964680832639,0.614321404198464,0,0,0.111308705022906,0,0,0.796991953004279,0.828851746593443,0,0.306806047506464,0,6.84287092855976,0,0,0,0.887790650732402,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.520874984799877,0,0,0,0,0,0.219385397153973,0,0,0.692552326534174,0.113942055847001,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0.789168805698781,1.20990716048664,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.290967049465258,0.0882561266915003,1.12990370390266,0.137041924646751,0,0,0,0,1.49417096317547,0,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0,0,0,0,3.90995361781156,4.35404805622199,0.717873024576814,0,1.71690419254628,0.223171457441873,0.134366944973453,2.52209918479682,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,1.42939065274673,0,0,2.71499800876856,0,1.63293680054705,0,0,0.511164065356265,0,0,0,0.387848869084652,0.13223260174269,0,0,0.640724475406168,0.78602152549833,2.89967338743037,1.48849806543585,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0.895528817321244,0.233713309847224,5.54805861502613,0.947015026375446,2.0125432140206,4.44905610798268,9.84012294106771,5.29308233171337,1.24349760466224,1.62640664988597,0.63718706865481,4.04822800947244,0.155262956876259,4.97647449409027,2.39257543102195,0.521745061811734,0.150257608997218,0.380805212168795,1.62748293281865,0.181848659202559,0.537052785212442,0.928067519756987,0.796191777397232,0.800055529326307,0,0,2.52369796457302,0,0,0,1.81364740409818,0.231522474323834,1.71315693154527,5.90993175568908,0,0.219284049578707,0.706756583783524,0,1.18259708457151,0,0,0.303859956177382,0.276516872303462,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0.109209638192014,0,0,0,0,1.90802610392051,0,0,1.41070377476274,0.3062454773532,0.192687675289379,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0.183428598521679,0,3.4324388592045,0,0,0.225630985047772,0.20170506870352,0,0,1.47394725759087,0,0,0,0,0,0,0,3.96968942711435,0,0.51104971055838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| |||
|short_description=p@chr3:100553556..100553602,- | |||
}} |
Revision as of 20:12, 21 January 2014
Short description: | p@chr3:100553556..100553602, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr3:100553556..100553602, - |
Coexpression cluster: | C404_Fibroblast_mesenchymal_Synoviocyte_Smooth_basal_mesodermal_Chondrocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 1.03e-09 | 4 |
migratory trunk neural crest cell | 1.03e-09 | 4 |
fibrocyte | 3.00e-07 | 3 |
tendon cell | 3.00e-07 | 3 |
receptor cell | 4.81e-07 | 6 |
sensory epithelial cell | 4.81e-07 | 6 |
olfactory epithelial cell | 4.81e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel layer | 2.60e-08 | 7 |
dense regular connective tissue | 3.00e-07 | 3 |
tendon | 3.00e-07 | 3 |
regular connective tissue | 3.00e-07 | 3 |