FFCP PHASE1:Hg19::chr4:77870174..77870204,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:77870174..77870204,+ | |||
|id=chr4:77870174..77870204,+ | |||
|ontology_enrichment_celltype=CL:0002620!1.18e-08!23;CL:0000057!9.84e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.08e-20;23!CL:0002615;2.65e-13;3!CL:0002580;2.65e-13;3!CL:0000136;3.52e-11;13!CL:0002617;1.10e-09;2!CL:0002334;1.15e-08;12!CL:0000057;4.07e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.89e-20,23;CL:0000057,1.96e-17,76;CL:0002615,1.66e-13,3;CL:0002580,1.66e-13,3;CL:0002617,5.93e-10,2;CL:0000136,9.69e-10,15;CL:0002334,9.18e-09,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.88e-21;5!DOID:450;3.88e-21;5!DOID:66;3.88e-21;5!DOID:423;3.88e-21;5!DOID:0080000;3.88e-21;5!DOID:11722;3.88e-21;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.12e-21,5;DOID:450,1.12e-21,5;DOID:66,1.12e-21,5;DOID:423,1.12e-21,5;DOID:0080000,1.12e-21,5;DOID:11722,1.12e-21,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!6.15e-07!45;UBERON:0002416!6.15e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.24e-17;6!UBERON:0002358;1.24e-17;6!UBERON:0003684;1.24e-17;6!UBERON:0001178;1.24e-17;6!UBERON:0004457;1.16e-11;9!UBERON:0000042;1.16e-11;9!UBERON:0000310;1.76e-10;10!UBERON:0002097;1.17e-09;41!UBERON:0001443;1.68e-09;11!UBERON:0002199;7.12e-08;46!UBERON:0002416;7.12e-08;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,7.75e-18,6;UBERON:0002358,7.75e-18,6;UBERON:0003684,7.75e-18,6;UBERON:0001178,7.75e-18,6;UBERON:0002097,1.59e-12,41;UBERON:0002199,6.97e-11,46;UBERON:0002416,6.97e-11,46;UBERON:0000310,1.05e-10,10;UBERON:0001443,1.06e-09,11;UBERON:0004457,9.18e-09,12;UBERON:0000042,9.18e-09,12 | |||
|phase1_expression=1.81678379270557,6.42301571672949,1.83240725324762,2.00146596706261,1.34088328328186,0,0,0.631719873426831,0.522371256399677,0,0,0.218441372130172,0.527533956456907,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0,0,1.00434111675842,0.687720651731561,0.738905305049512,0.787107813136792,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0.242584061187816,0,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0.150176892841506,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0.400395987036012,0,0.661044872784862,0,0,0,0,1.32171328579026,0,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90090408889675,0,0.127986611154418,0,0,0,0.403213486449465,0.267440195783507,0.289648807765598,0,0.670700859703636,0.255725123687061,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0,0,0.263504357079378,0.130979075497713,0,0,0.324547393654683,1.0447784237956,0.398873881556595,0.238490624305342,1.71598473234038,0.74291500265913,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,1.49091585508596,0.506522046658319,0.264818361626438,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0.298897361103602,0.352303495931295,0.161872944368132,0.280901613404497,0.204154171254893,0.368502951935304,0,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0.554128230968366,0,1.5324389789951,0.150238058906597,0,1.79389635688862,2.13557388818567,2.11931901159562,1.50045548042201,1.75189299705346,1.03056216018252,0.930584281657949,0.168776332241266,2.82567314967476,1.26216887122057,1.93304787148829,0.161646056818812,6.74518225781567,3.92933183087797,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.928735856063958,0,0,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0,0,0.38474715694639,0,1.40241773803446,0,1.47008711385542,0,0,1.77236972004421,0,0.122988438543114,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0,0.469634776943287,0,0,0.190254152234598,0,0,0.492434012174795,0.234004265139238,0.148631162288728,0,0.16798212819886,0,0.0895585227028483,0,0.383382679165211,0.492663237895943,0.176096868026452,0.414656231081544,0.288239906833923,0.6312121671319,0.253991577168676,0,0,1.71072446022705,0,0.300343057843917,0,0,0,0.22001485746285,0.387815147273333,0,0.845302752556,0.26593811658487,1.04007436911366,0,0,0.266422179016099,0.428933980974443,0,0,0.65147236858747,0,0,0.602878754119172,0,0,0,0,0,0.718874566474748,0,0,0.144781306667579,0,0.716243852959582,0,0,0,0.385029108839245,0.508189248444927,0,0.773288812777695,0,1.27587750330633,0,0,0,0,0.500170521059677,0,0.415941723061614,1.42743191037729,1.10391690523754,0.35142424497814,0.300946099727719,0,0,0,0,0.347534457872331,0,0,0,0.215714200818617,0.106727557803444,0.303127571446259,0,0,1.24053903909388,2.30192959932094,1.96462066103151,0.512556597022804,3.58195074346692,1.44768529029247,0,0.462629081407967,0.355123450626254,0.164254312027618,0,0,0,0,0,0.229628896329213,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0.206082023295445,0.732555718546747,0.577566499444116,0,0,0,0,0,0,0.827019434907183,0.107420244868274,0,0.170453254832202,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0.869932992075073,0,0,0.744316738719335,0.316379424718726,0.571890581771475,0,0,0,0,0.359744915166629,0.823611089208164,0.353437207037059,0.202182481573316,0,0,0,0,0,0.545999645631943,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0.294747123039363,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.213648142254946,0,0,0,0,0.782560276832555,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0.307240764308458,1.3420566473545,0.667396566847634,0,0.278406173895242,0,0.270455678475983,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0.123084805461069,1.55519793830904,0.179736702294654,0,0.511572370226872,0.0986434056369336,0,0,0,0.278304294485554,0,0,0.524759999977174,0,0.1137934482855,0,0,0,0,0,0.885741385813839,1.20596438625408,0,0.221158519862449,0.591095237907095,0.438770794307945,0.10893846351899,0,0.0769502585037971,0,0.46112780877612,0.538545866458633,0.108647371922008,0,0.824378340616761,0,0,0.156980256395025,0,1.1279783030859,0.19606253431774,1.34257269580674,0.37950746544837,0.158936578980379,0,0,0.141353071433941,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0,0,0,0.242780379534093,0.394584402849391,1.20990716048664,0,0.189559738885464,0.150323419414493,0.103688191397247,0,0,0.627865836814451,0,0,0,0,0,0.174118413160805,0,0.171986032471617,0,0,0,0.0969890164884194,0.176512253383001,0,0,0,0.379864775735272,0,0,0.213452994739353,0,0,0,0.171594997861965,0.14405479798815,0.124252535565433,0,0,0,0.101998217636322,0,0,0.273810757783986,0,0.429765441419957,0,0.279282401272254,0,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| |||
|short_description=p@chr4:77870174..77870204,+ | |||
}} |
Revision as of 01:44, 22 January 2014
Short description: | p@chr4:77870174..77870204, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:77870174..77870204, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.89e-20 | 23 |
fibroblast | 1.96e-17 | 76 |
adipocyte of omentum tissue | 1.66e-13 | 3 |
preadipocyte of the breast | 1.66e-13 | 3 |
adipocyte of breast | 5.93e-10 | 2 |
fat cell | 9.69e-10 | 15 |
preadipocyte | 9.18e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
omentum | 7.75e-18 | 6 |
peritoneum | 7.75e-18 | 6 |
abdominal cavity | 7.75e-18 | 6 |
visceral peritoneum | 7.75e-18 | 6 |
skin of body | 1.59e-12 | 41 |
integument | 6.97e-11 | 46 |
integumental system | 6.97e-11 | 46 |
breast | 1.05e-10 | 10 |
chest | 1.06e-09 | 11 |
cavity lining | 9.18e-09 | 12 |
serous membrane | 9.18e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.12e-21 | 5 |
myotonic disease | 1.12e-21 | 5 |
muscle tissue disease | 1.12e-21 | 5 |
myopathy | 1.12e-21 | 5 |
muscular disease | 1.12e-21 | 5 |
myotonic dystrophy | 1.12e-21 | 5 |