FFCP PHASE1:Hg19::chr5:28339690..28339727,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C158 | |||
|description=CAGE_peak_at_chr5:28339690..28339727,- | |||
|id=chr5:28339690..28339727,- | |||
|ontology_enrichment_celltype=CL:0002602!4.66e-21!2;CL:0002564!1.83e-14!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5409!3.79e-11!4;DOID:1325!6.39e-07!7;DOID:3904!6.39e-07!7 | |||
|ontology_enrichment_disease_v019=DOID:299;2.15e-09;25!DOID:7;2.32e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:299,2.15e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0009568!4.66e-21!2;UBERON:0002216!4.66e-21!2;UBERON:0002209!4.66e-21!2;UBERON:0002213!4.66e-21!2;UBERON:0004267!4.66e-21!2;UBERON:0006444!4.66e-21!2;UBERON:0001995!4.66e-21!2;UBERON:0004715!4.66e-21!2;UBERON:0001468!4.66e-21!2;UBERON:0001130!4.66e-21!2;UBERON:0001066!4.66e-21!2;UBERON:0002369!1.22e-14!3;UBERON:0001235!1.22e-14!3;UBERON:0006858!1.22e-14!3;UBERON:0002418!1.60e-14!3;UBERON:0004755!1.60e-14!3;UBERON:0002242!1.83e-14!3;UBERON:0003068!1.83e-14!3;UBERON:0002328!1.83e-14!3;UBERON:0004880!1.83e-14!3;UBERON:0004905!2.97e-09!5;UBERON:0005174!2.97e-09!5;UBERON:0000982!2.97e-09!5;UBERON:0003586!2.97e-09!5;UBERON:0004770!2.97e-09!5;UBERON:0001137!2.97e-09!5;UBERON:0002090!6.34e-08!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;2.39e-66;3!UBERON:0001235;2.39e-66;3!UBERON:0006858;2.39e-66;3!UBERON:0001851;1.22e-14;15!UBERON:0002368;2.32e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,2.39e-66,3;UBERON:0001235,2.39e-66,3;UBERON:0006858,2.39e-66,3;UBERON:0001851,1.22e-14,15;UBERON:0003064,1.52e-08,28;UBERON:0002368,4.03e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39809460898638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80175617316141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:28339690..28339727,- | |||
}} |
Revision as of 04:53, 22 January 2014
Short description: | p@chr5:28339690..28339727, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:28339690..28339727, - |
Coexpression cluster: | C158_adrenal_gastric_temporal_parietal_duodenum_caudate_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adrenal gland | 2.39e-66 | 3 |
adrenal cortex | 2.39e-66 | 3 |
adrenal/interrenal gland | 2.39e-66 | 3 |
cortex | 1.22e-14 | 15 |
intermediate mesoderm | 1.52e-08 | 28 |
endocrine gland | 4.03e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 2.15e-09 | 25 |