FFCP PHASE1:Hg19::chr5:50687141..50687154,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1737 | |||
|description=CAGE_peak_at_chr5:50687141..50687154,+ | |||
|id=chr5:50687141..50687154,+ | |||
|ontology_enrichment_celltype=CL:0000242!7.33e-41!2;CL:0000312!5.03e-17!5;CL:0000240!2.33e-14!6;CL:0000311!2.33e-14!6;CL:0000079!2.33e-14!6;CL:0000237!2.33e-14!6;CL:0000036!2.33e-14!6;CL:0000357!2.33e-14!6;CL:0000114!2.33e-14!6;CL:0002535!1.82e-11!2;CL:0000362!5.15e-11!8;CL:0000333!9.07e-08!41;CL:0002159!4.00e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.56e-98;2!CL:0000242;2.56e-98;2!CL:0000312;3.31e-40;5!CL:0000240;9.87e-34;6!CL:0000311;9.87e-34;6!CL:0000079;9.87e-34;6!CL:0000237;9.87e-34;6!CL:0002535;4.32e-26;2!CL:0000362;6.41e-23;9!CL:0002159;3.66e-15;14!CL:0000095;1.81e-11;17!CL:0000333;3.26e-11;5!CL:0002319;2.22e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.56e-98,2;CL:0000312,3.31e-40,5;CL:0000240,9.87e-34,6;CL:0000311,9.87e-34,6;CL:0000079,9.87e-34,6;CL:0000237,9.87e-34,6;CL:0000036,9.87e-34,6;CL:0000357,9.87e-34,6;CL:0000114,9.87e-34,6;CL:0002535,4.32e-26,2;CL:0000362,6.41e-23,9;CL:0002159,3.66e-15,14;CL:0000095,1.81e-11,17;CL:0000123,1.81e-11,17;CL:0000333,3.05e-11,41;CL:0002319,2.22e-08,25;CL:0000133,3.51e-08,59;CL:0000221,6.92e-07,72;CL:0002077,7.37e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000357;9.87e-34;6!CL:0000114;9.87e-34;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;2.66e-11;5!DOID:169;1.44e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,2.66e-11,5;DOID:169,1.44e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0000989!5.16e-21!1;UBERON:0008811!5.16e-21!1;UBERON:0006258!5.16e-21!1;UBERON:0005876!5.16e-21!1;UBERON:0004874!5.16e-21!1;UBERON:0000998!6.31e-21!1;UBERON:0006868!6.31e-21!1;UBERON:0006955!1.82e-11!2;UBERON:0004801!1.82e-11!2;UBERON:0003135!4.04e-08!11;UBERON:0006947!7.26e-08!3;UBERON:0004054!7.26e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;4.32e-26;2!UBERON:0004801;4.32e-26;2!UBERON:0001003;3.15e-14;15!UBERON:0007376;3.15e-14;15!UBERON:0000013;3.26e-11;5!UBERON:0002410;3.26e-11;5!UBERON:0000002;1.22e-09;6!UBERON:0001560;1.22e-09;6!UBERON:0010371;3.69e-07;31!UBERON:0000010;8.37e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,4.32e-26,2;UBERON:0004801,4.32e-26,2;UBERON:0001003,3.15e-14,15;UBERON:0007376,3.15e-14,15;UBERON:0007383,3.15e-14,15;UBERON:0000013,3.26e-11,5;UBERON:0002410,3.26e-11,5;UBERON:0000002,1.22e-09,6;UBERON:0001560,1.22e-09,6;UBERON:0000010,8.37e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.55025144421118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.1516839638757,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6960144422566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874238242015829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:50687141..50687154,+ | |||
}} |
Revision as of 05:21, 22 January 2014
Short description: | p@chr5:50687141..50687154, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:50687141..50687154, + |
Coexpression cluster: | C1737_argyrophil_merkel_neuroblastoma_gastrointestinal_carcinoid_smallcell_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.56e-98 | 2 |
keratinocyte | 3.31e-40 | 5 |
stratified squamous epithelial cell | 9.87e-34 | 6 |
keratin accumulating cell | 9.87e-34 | 6 |
stratified epithelial cell | 9.87e-34 | 6 |
keratinizing barrier epithelial cell | 9.87e-34 | 6 |
epithelial fate stem cell | 9.87e-34 | 6 |
stratified epithelial stem cell | 9.87e-34 | 6 |
surface ectodermal cell | 9.87e-34 | 6 |
epithelial cell of cervix | 4.32e-26 | 2 |
epidermal cell | 6.41e-23 | 9 |
general ecto-epithelial cell | 3.66e-15 | 14 |
neuron associated cell | 1.81e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 1.81e-11 | 17 |
migratory neural crest cell | 3.05e-11 | 41 |
neural cell | 2.22e-08 | 25 |
neurectodermal cell | 3.51e-08 | 59 |
ectodermal cell | 6.92e-07 | 72 |
ecto-epithelial cell | 7.37e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 4.32e-26 | 2 |
cervix epithelium | 4.32e-26 | 2 |
skin epidermis | 3.15e-14 | 15 |
outer epithelium | 3.15e-14 | 15 |
enveloping layer of ectoderm | 3.15e-14 | 15 |
sympathetic nervous system | 3.26e-11 | 5 |
autonomic nervous system | 3.26e-11 | 5 |
uterine cervix | 1.22e-09 | 6 |
neck of organ | 1.22e-09 | 6 |
peripheral nervous system | 8.37e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.66e-11 | 5 |
neuroendocrine tumor | 1.44e-09 | 6 |