FFCP PHASE1:Hg19::chr5:65018017..65018088,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57486 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16058 | |||
|TSSclassifier=strong | |||
|UniProt=F8W713,Q9BYT8,E9PCB6,D6R9Y0,Q9BQD0 | |||
|association_with_transcript=0bp_to_ENST00000340159,ENST00000380985,ENST00000502464,ENST00000506539,ENST00000514991,NM_020726,uc003jue.2,uc003juf.2_5end | |||
|description=CAGE_peak_1_at_NLN_5end | |||
|id=chr5:65018017..65018088,+ | |||
|ontology_enrichment_celltype=CL:0000548!5.29e-10!679;CL:0000004!5.29e-10!679;CL:0000255!5.29e-10!679;CL:0000012!8.56e-10!682;CL:0000066!1.00e-08!254;CL:0002321!2.63e-07!248;CL:0000220!8.67e-07!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.04e-08,253;CL:0002321,3.30e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.84e-20!235;DOID:14566!2.24e-20!239;DOID:0050687!3.28e-13!143;DOID:305!5.52e-10!106;DOID:0050686!1.86e-08!137;DOID:8692!9.89e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.45e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.89e-20,235;DOID:14566,2.30e-20,239;DOID:0050687,3.28e-13,143;DOID:305,5.52e-10,106;DOID:0050686,1.90e-08,137;DOID:8692,9.89e-08,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@NLN | |||
}} |
Revision as of 05:40, 22 January 2014
Short description: | p1@NLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NLN_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000340159, ENST00000380985, ENST00000502464, ENST00000506539, ENST00000514991, NM_020726, uc003jue.2, uc003juf.2_5end |
EntrezGene: | NLN |
HGNC: | 16058 |
UniProt: | F8W713Q9BYT8E9PCB6D6R9Y0Q9BQD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.04e-08 | 253 |
embryonic cell | 3.30e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.89e-20 | 235 |
disease of cellular proliferation | 2.30e-20 | 239 |
cell type cancer | 3.28e-13 | 143 |
carcinoma | 5.52e-10 | 106 |
organ system cancer | 1.90e-08 | 137 |
myeloid leukemia | 9.89e-08 | 31 |