FFCP PHASE1:Hg19::chr5:137804405..137804444,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1958 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3238 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-46bp_to_M24019_5end | |||
|description=CAGE_peak_3_at_EGR1_5end | |||
|id=chr5:137804405..137804444,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.74e-14!143;DOID:14566!2.65e-13!239;DOID:162!3.16e-13!235;DOID:305!1.06e-10!106;DOID:0050686!1.08e-07!137;DOID:1749!2.07e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.33e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.35e-15,143;DOID:14566,5.15e-13,239;DOID:162,8.41e-13,235;DOID:305,1.49e-11,106;DOID:1749,6.69e-09,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p3@EGR1 | |||
}} |
Revision as of 07:41, 22 January 2014
Short description: | p3@EGR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EGR1_5end |
Coexpression cluster: | NA |
Association with transcript: | -46bp_to_M24019_5end |
EntrezGene: | EGR1 |
HGNC: | 3238 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.35e-15 | 143 |
disease of cellular proliferation | 5.15e-13 | 239 |
cancer | 8.41e-13 | 235 |
carcinoma | 1.49e-11 | 106 |
squamous cell carcinoma | 6.69e-09 | 14 |