FFCP PHASE1:Hg19::chr6:7568048..7568061,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C324 | |||
|description=CAGE_peak_at_chr6:7568048..7568061,+ | |||
|id=chr6:7568048..7568061,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.14e-19!254;CL:0002076!6.64e-16!43;CL:0000223!1.80e-14!59;CL:0002251!1.42e-12!21 | |||
|ontology_enrichment_celltype_v019=CL:0002231;9.29e-15;3!CL:0000622;1.55e-09;5!CL:0002537;2.22e-09;5!CL:0000154;4.34e-08;6!CL:0002159;2.71e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,1.32e-14,3;CL:0000622,1.55e-09,5;CL:0002537,1.84e-09,5;CL:0000154,4.34e-08,6;CL:0002159,2.92e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0009143;4.29e-12;1!UBERON:0008814;9.18e-07;2!UBERON:0010056;9.18e-07;2 | |||
|ontology_enrichment_disease=DOID:305!4.86e-12!106;DOID:0050687!2.62e-09!143;DOID:299!2.34e-08!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.91e-12!169;UBERON:0000925!2.91e-12!169;UBERON:0006595!2.91e-12!169;UBERON:0001007!4.23e-09!155;UBERON:0001555!4.23e-09!155;UBERON:0007026!4.23e-09!155;UBERON:0004921!1.25e-07!129;UBERON:0004185!1.25e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;1.07e-11;1!UBERON:0005631;3.52e-10;10!UBERON:0000158;3.52e-10;10!UBERON:0000974;5.84e-08;6!UBERON:0000305;6.11e-07;7!UBERON:0001003;7.72e-07;15!UBERON:0007376;7.72e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,7.76e-12,1;UBERON:0005631,1.89e-07,14;UBERON:0000158,1.89e-07,14;UBERON:0003102,2.07e-07,99;UBERON:0000161,3.17e-07,36;UBERON:0000305,5.34e-07,7;UBERON:0001003,7.20e-07,15;UBERON:0007376,7.20e-07,15;UBERON:0007383,7.20e-07,15 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919463387397059,0,0,0,0,0,0.300091096084402,0,0.772921620136887,0,0,0.194874010322397,0.252433774244115,0,0,0.355009592516614,0.10075209822764,0,0.193260853163297,0.818238361772504,0.286804595389004,0,0,0.116193942869518,0,0,0.36497735907583,0,0.643240938192885,0,0,0,0.118306800039844,0.337169380156203,0,0.330881918197182,0.435758888184812,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.658501712451753,1.1240175325762,0.402115889646523,0.833296006426766,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0.790204397959275,0,0,0,0,0,1.00789276919316,0.141775097242386,0.806026704325635,0.581267877027924,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24900292158013,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0.248107807818777,0,1.12264037773229,0.128139149255701,0.511707249066704,0.321707842287215,0,0,0,0,0,0,0.846016147141356,1.00253235151642,1.19705285616665,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,2.60024098414608,0,0,0,0,0,0,0,0,0,0.661139661443912,0.192190067365106,0.382838137483752,0.30347334256665,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,1.68471475667626,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0.213648142254946,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,1.43246690842614,0.593929361665277,2.76444631889309,0,0,0.111308705022906,0,0,0,0.276283915531148,0.503865495708552,0,0,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0,0,0.520855522170466,0,0,0.1137934482855,0,0.472775363535873,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0.557694977114413,0.307801034015188,0,0.23056390438806,0.718061155278177,0.977826347298073,0.957003479195758,0.0915975934018623,4.26427820814908,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0.216388639742091,0,0,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0.789168805698781,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0.284609546029793,0,1.04135843001079,0.0979923974143777,0.0870592065804026,0,0,0.0967563312890851,0,0.0821154570532092,2.03676934625681,0,0,0,0,0,0,0,0,0.599428828746391,0.288180834308212,0,0.171594997861965,0,0,0.942776138467182,0,0,0,0,0,0,0,0.429765441419957,0,0,0.458320848023367,0,0.998395002494955,2.57535628881943,0,0.134366944973453,0,0,0.472699093843342,0.164831716762333,0.13480708770837,0,0,0,0,0,0.275078873194468,0.415440338029185,0,0.77380195455795,0.0607495566580247,0.670869375198532,0.236417121897595,0,0,0,0.767660789277781,0.714695326373367,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0.796191777397232,0,0,0.336749488765919,0,0,0,0,0,0,0.97894681802587,0,0.308801447160972,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,2.38457178078183,0.231051332300676,0,0,0.198916222116275,0,0,0.781514011233092,0.261906694481422,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0.638812138197976,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0,0.158013611732727,0,0,0,0.414432328326074,2.0486217251274,0.691259661814092,0,0,0,0,0.22910686854405,0,0,0.559277158988962,0.196300467230486,0.121917924982269,0,0,0,1.45713297917742,0,0.397901550322736,0,0.11294608203896,0,0.150962843566674,0.463044948647668,0.218559560503957,0,0,0,0,0,0.4226557275834,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0.126166424835079,0,0,0,0,0.0918948995348449,0.250707539292375,0,0,0,0.103432995861895,1.49263787330687,0.23806443146374,0.129177819672012,0,0,0.0636471582781649,0,4.78976845373315,0.684466602170562,0,0.573777643141411,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr6:7568048..7568061,+ | |||
}} |
Revision as of 09:52, 22 January 2014
Short description: | p@chr6:7568048..7568061, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:7568048..7568061, + |
Coexpression cluster: | C324_tongue_salivary_oral_Prostate_amniotic_chorionic_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 1.32e-14 | 3 |
acinar cell | 1.55e-09 | 5 |
amnion mesenchymal stem cell | 1.84e-09 | 5 |
protein secreting cell | 4.34e-08 | 6 |
general ecto-epithelial cell | 2.92e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
surface | 7.76e-12 | 1 |
extraembryonic membrane | 1.89e-07 | 14 |
membranous layer | 1.89e-07 | 14 |
surface structure | 2.07e-07 | 99 |
orifice | 3.17e-07 | 36 |
amnion | 5.34e-07 | 7 |
skin epidermis | 7.20e-07 | 15 |
outer epithelium | 7.20e-07 | 15 |
enveloping layer of ectoderm | 7.20e-07 | 15 |