FFCP PHASE1:Hg19::chr6:7580331..7580352,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C324 | |||
|description=CAGE_peak_at_chr6:7580331..7580352,+ | |||
|id=chr6:7580331..7580352,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.51e-24!254;CL:0002076!2.48e-12!43;CL:0000223!2.80e-12!59;CL:0002251!9.40e-11!21 | |||
|ontology_enrichment_celltype_v019=CL:0002623;3.91e-13;3!CL:0002251;1.63e-11;20!CL:0000240;5.19e-11;6!CL:0000311;5.19e-11;6!CL:0000079;5.19e-11;6!CL:0000237;5.19e-11;6!CL:0002159;1.26e-09;14!CL:0000622;4.85e-08;5!CL:0000312;5.33e-08;5!CL:0000154;9.28e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,4.11e-13,3;CL:0002251,2.00e-11,20;CL:0000240,4.30e-11,6;CL:0000311,4.30e-11,6;CL:0000079,4.30e-11,6;CL:0000237,4.30e-11,6;CL:0000036,4.30e-11,6;CL:0000357,4.30e-11,6;CL:0000114,4.30e-11,6;CL:0002159,1.22e-09,14;CL:0002076,3.44e-09,42;CL:0000622,4.99e-08,5;CL:0000312,5.35e-08,5;CL:0000066,1.59e-07,253;CL:0000154,9.50e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000357;5.19e-11;6!CL:0000114;5.19e-11;6!UBERON:0008814;4.14e-09;2!UBERON:0010056;4.14e-09;2 | |||
|ontology_enrichment_disease=DOID:305!5.88e-21!106;DOID:0050687!2.44e-14!143;DOID:162!2.83e-08!235;DOID:14566!6.59e-08!239;DOID:299!8.65e-08!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.99e-13!169;UBERON:0000925!1.99e-13!169;UBERON:0006595!1.99e-13!169;UBERON:0001007!4.44e-11!155;UBERON:0001555!4.44e-11!155;UBERON:0007026!4.44e-11!155;UBERON:0001004!7.23e-11!72;UBERON:0004921!1.86e-09!129;UBERON:0004185!1.86e-09!129;UBERON:0000077!7.06e-09!130;UBERON:0001041!3.75e-08!98;UBERON:0001737!2.03e-07!9;UBERON:0001557!3.00e-07!19;UBERON:0000166!3.16e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;4.68e-11;6!UBERON:0003293;4.68e-11;6!UBERON:0003294;4.68e-11;6!UBERON:0010047;4.68e-11;6!UBERON:0003408;4.68e-11;6!UBERON:0000167;4.68e-11;6!UBERON:0001041;1.19e-09;14!UBERON:0000165;5.53e-08;28!UBERON:0000161;4.19e-07;19!UBERON:0000166;4.19e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,5.16e-11,6;UBERON:0003293,5.16e-11,6;UBERON:0003294,5.16e-11,6;UBERON:0010047,5.16e-11,6;UBERON:0000167,5.16e-11,6;UBERON:0000166,4.23e-08,22;UBERON:0003102,1.05e-07,99;UBERON:0000165,1.26e-07,29;UBERON:0000930,1.26e-07,29 | |||
|phase1_expression=0.908391896352783,0.428201047781966,0.422863212287913,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0.175669571386252,0,0,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0.358779271377724,0,0,0.600182192168805,0.103052529238439,0.515281080091258,0.558350568994769,0.168776332241266,0.389748020644795,0.504867548488229,0,0.323292113637624,0.710019185033229,0.10075209822764,0,0.386521706326594,0.545492241181669,0.573609190778008,0.121973706129595,0.265059536642971,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.591534000199219,0.674338760312407,0.964044119533928,0.55146986366197,0.871517776369625,0.71181185733329,0.943819157121151,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,2.19500570817251,2.24803506515239,2.21163739305588,1.66659201285353,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0.790204397959275,0.858486162094873,0,0,0,0.93733833986777,1.6798212819886,1.27597587518148,0.716468181622786,3.19697332365358,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,1.67737398844108,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.623912584592421,1.96271887676878,0.788512075169673,0.468565659970853,0,0,0,0.664225598535437,0.368738337083406,0,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,1.53461973288062,0.561320188866147,0.256278298511402,0.511707249066704,0.482561763430822,0,0.154209693802656,0,0.0821271560138091,0,0,0.483437798366489,0.40101294060657,3.95948252424354,0,0,0,0,0.770153371044148,0,0,0.211103257785751,0,0,0.647747748306418,1.54227252690289,0,0,0,0,0,0.657779629937804,0,0.512900250232778,0.328014645699706,0,0.206082023295445,0,0,0,0.650060246036521,0,0,0,0.15350367472613,0,0,0,0,0.0890320356467374,0.826424576804891,0.576570202095319,0.638063562472921,1.51736671283325,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0,0,0,0.886860307073351,1.37834040124176,0,0.764637207142375,0,0,0,0,0,0,0.640944426764839,0,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,2.86493381685228,0,4.60741053148848,0,0.140669416410513,0,0,0,0,0.276283915531148,1.51159648712566,0.102268682502155,0,0.933118762985422,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,1.04171104434093,0,0,0,0.254253650292766,0.709163045303809,0,0,0,0,0,0,0,0,0,0,1.81250867562184,0.461701551022782,0,0.46112780877612,1.88491053260521,3.36806852958225,0.957003479195758,0.0915975934018623,3.19820865611181,0,0,0,0,0,0,0.189753732724185,0,0,0.326465616318295,0.282706142867882,0.432777279484182,0,0.353830258013357,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0.391329237864179,0,0,0,0,0.063186579628488,0,0.207376382794494,0,0,0,0,0,0,1.73559738335131,0.881931576729399,0.34823682632161,0.17472666824203,0,0.387025325156341,0.146178634172371,0.164230914106418,1.84279131327997,0,0.451961481561065,0,0,0,0.586654148204409,0,0.213452994739353,1.19885765749278,0.864542502924636,0.229073192331831,1.02956998717179,0.14405479798815,0,2.12124631155116,0,0.313808538937,0,0,0,0,0,0.859530882839914,0,0.837847203816763,1.3749625440701,0,1.19807400299395,0,0.446342914883745,0.53746777989381,0,0,0.709048640765013,0.412079291905832,0.943649613958588,0.295282444544246,0,0,0,0,0,0,0,0,0,3.01891218839339,0.0788057072991982,0,0,0,0.767660789277781,0,3.31045985182716,0,0,0,0,0,0,0,0,0.293104467356165,1.32506888912221,0,0,0,0,0,0.471612915298998,0,0,0,0,0.638341257770182,0,0,0,0,0.785270481251171,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0.521745061811734,0,0,0,0,0,0.464033759878494,0.796191777397232,0,0.343395705182793,0,0,0,0,0,0.680117776536817,0.926089897295336,0.97894681802587,0,0.308801447160972,0,0.176689145945881,0,0,0.512483037175893,0,0.911579868532147,0,0,0.132864840313363,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,1.24415452006595,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0,0,0,0.319267718114302,0,0,0,0.161475645631851,0,0.588886311006154,0,5.68628655417205,1.15525666150338,0,0,0,0,0,0,0.785720083444267,0.982631505060581,0.591424344868181,0,0,0,0,0,0.548257766857182,1.48863353516788,0,1.53314913167514,0,0,0,0.227662191351298,0.532214220975833,0,0,0.0679697329768317,0,0.118193840883968,0.222462803784138,0,0,0.280272163313789,0,0,0.47775168788705,0,0.47404083519818,0,0,0,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| |||
|short_description=p@chr6:7580331..7580352,+ | |||
}} |
Revision as of 09:52, 22 January 2014
Short description: | p@chr6:7580331..7580352, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:7580331..7580352, + |
Coexpression cluster: | C324_tongue_salivary_oral_Prostate_amniotic_chorionic_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 4.11e-13 | 3 |
epithelial cell of alimentary canal | 2.00e-11 | 20 |
stratified squamous epithelial cell | 4.30e-11 | 6 |
keratin accumulating cell | 4.30e-11 | 6 |
stratified epithelial cell | 4.30e-11 | 6 |
keratinizing barrier epithelial cell | 4.30e-11 | 6 |
epithelial fate stem cell | 4.30e-11 | 6 |
stratified epithelial stem cell | 4.30e-11 | 6 |
surface ectodermal cell | 4.30e-11 | 6 |
general ecto-epithelial cell | 1.22e-09 | 14 |
endo-epithelial cell | 3.44e-09 | 42 |
acinar cell | 4.99e-08 | 5 |
keratinocyte | 5.35e-08 | 5 |
epithelial cell | 1.59e-07 | 253 |
protein secreting cell | 9.50e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 5.16e-11 | 6 |
gland of oral region | 5.16e-11 | 6 |
gland of foregut | 5.16e-11 | 6 |
oral gland | 5.16e-11 | 6 |
oral cavity | 5.16e-11 | 6 |
oral opening | 4.23e-08 | 22 |
surface structure | 1.05e-07 | 99 |
mouth | 1.26e-07 | 29 |
stomodeum | 1.26e-07 | 29 |