FFCP PHASE1:Hg19::chr6:30043497..30043501,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80352 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18064 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=64bp_to_AB464177,BC111601_5end | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_4_at_RNF39_5end | |||
|id=chr6:30043497..30043501,- | |||
|ontology_enrichment_celltype=CL:0002368!1.19e-12!13;CL:0002076!3.79e-11!43;CL:0002328!4.00e-10!3;CL:0002336!3.83e-08!1;CL:0002261!3.83e-08!1;CL:0002170!3.83e-08!1;CL:0000223!9.58e-08!59;CL:0002202!2.95e-07!9;CL:0002632!2.95e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000244;7.14e-26;4!CL:0000731;7.14e-26;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,7.14e-26,4;CL:0000731,7.14e-26,4 | |||
|ontology_enrichment_development_v019=UBERON:0009143;9.37e-99;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!7.15e-11!53;UBERON:0004815!4.00e-10!3;UBERON:0002031!4.00e-10!3;UBERON:0001004!3.18e-09!72;UBERON:0005178!5.12e-09!34;UBERON:0002224!5.12e-09!34;UBERON:0005181!9.80e-09!35;UBERON:0007029!2.52e-08!1;UBERON:0002372!3.34e-08!1;UBERON:0001961!3.34e-08!1;UBERON:0001744!3.34e-08!1;UBERON:0001735!3.34e-08!1;UBERON:0001043!4.72e-08!4;UBERON:0009143!4.72e-08!4;UBERON:0007196!8.02e-08!14;UBERON:0001558!8.02e-08!14;UBERON:0002185!8.42e-08!4;UBERON:0000915!2.97e-07!52;UBERON:0004119!5.87e-07!169;UBERON:0000925!5.87e-07!169;UBERON:0006595!5.87e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001043;4.27e-34;3!UBERON:0000365;5.15e-21;5!UBERON:0005910;9.07e-18;6!UBERON:0000486;1.33e-09;12!UBERON:0001041;1.86e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001043,4.27e-34,3;UBERON:0009143,4.27e-34,3;UBERON:0000365,5.15e-21,5;UBERON:0005910,9.07e-18,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,1.33029046061003,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.230850775511391,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81268147816416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.852935927603924,0,0,0.0620747142958579,0,0,0,0,0.342233301085281,0.336760265072938,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@RNF39 | |||
}} |
Revision as of 10:47, 22 January 2014
Short description: | p4@RNF39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RNF39_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 64bp_to_AB464177, BC111601_5end |
EntrezGene: | RNF39 |
HGNC: | 18064 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 7.14e-26 | 4 |
urothelial cell | 7.14e-26 | 4 |
Ontology term | p-value | n |
---|---|---|
esophagus | 4.27e-34 | 3 |
esophageal region | 4.27e-34 | 3 |
urothelium | 5.15e-21 | 5 |
transitional epithelium | 9.07e-18 | 6 |