FFCP PHASE1:Hg19::chr6:72313654..72313701,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-81bp_to_BC038189_5end | |||
|description=CAGE_peak_1_at_BC038189_5end | |||
|id=chr6:72313654..72313701,+ | |||
|ontology_enrichment_celltype=CL:0002620!3.28e-08!23;CL:0000057!6.38e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.42e-15;23!CL:0002573;1.40e-08;2!CL:0000135;7.96e-08;3!CL:0000388;7.96e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.57e-15,23;CL:0000057,4.71e-12,76;CL:0002573,1.18e-08,2;CL:0000135,1.01e-07,3;CL:0000388,1.01e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.06e-07!5;DOID:450!3.06e-07!5;DOID:66!3.06e-07!5;DOID:423!3.06e-07!5;DOID:0080000!3.06e-07!5;DOID:11722!3.06e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.17e-12;5!DOID:450;1.17e-12;5!DOID:66;1.17e-12;5!DOID:423;1.17e-12;5!DOID:0080000;1.17e-12;5!DOID:11722;1.17e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.05e-12,5;DOID:450,1.05e-12,5;DOID:66,1.05e-12,5;DOID:423,1.05e-12,5;DOID:0080000,1.05e-12,5;DOID:11722,1.05e-12,5 | |||
|ontology_enrichment_uberon=UBERON:0002616!2.19e-15!59;UBERON:0002020!2.08e-14!34;UBERON:0003528!2.08e-14!34;UBERON:0001049!3.46e-14!57;UBERON:0005068!3.46e-14!57;UBERON:0006241!3.46e-14!57;UBERON:0007135!3.46e-14!57;UBERON:0000955!9.38e-14!69;UBERON:0006238!9.38e-14!69;UBERON:0001869!1.82e-13!32;UBERON:0001893!2.49e-13!34;UBERON:0003075!2.72e-13!86;UBERON:0007284!2.72e-13!86;UBERON:0002346!8.63e-13!90;UBERON:0002791!1.27e-12!33;UBERON:0001950!4.94e-12!20;UBERON:0002619!6.22e-12!22;UBERON:0000956!4.22e-11!25;UBERON:0000203!4.22e-11!25;UBERON:0002780!6.98e-11!41;UBERON:0001890!6.98e-11!41;UBERON:0006240!6.98e-11!41;UBERON:0003080!1.88e-10!42;UBERON:0000073!7.52e-10!94;UBERON:0001016!7.52e-10!94;UBERON:0001017!7.74e-10!82;UBERON:0000033!1.82e-09!123;UBERON:0005743!1.91e-09!86;UBERON:0000475!6.41e-09!365;UBERON:0003056!8.51e-09!61;UBERON:0000153!2.02e-08!129;UBERON:0007811!2.02e-08!129;UBERON:0004733!6.57e-07!12;UBERON:0002028!6.57e-07!12;UBERON:0007277!6.57e-07!12;UBERON:0004121!7.47e-07!169;UBERON:0001871!8.11e-07!7;UBERON:0000924!9.77e-07!173;UBERON:0006601!9.77e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;6.85e-08;41!UBERON:0007846;7.96e-08;3!UBERON:0000043;7.96e-08;3!UBERON:0007845;7.96e-08;3!UBERON:0002199;5.16e-07;46!UBERON:0002416;5.16e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,3.49e-10,41;UBERON:0002199,1.12e-08,46;UBERON:0002416,1.12e-08,46;UBERON:0007846,1.01e-07,3;UBERON:0000043,1.01e-07,3;UBERON:0007845,1.01e-07,3 | |||
|phase1_expression=0.181678379270557,2.5692062866918,0,4.00293193412522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0.408001382488506,0.313454721478088,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,0,0.144846518960824,0,0.973269740605272,0.189069634328136,0.443458794925128,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,10.4364109856017,2.5326102332916,12.0492354540029,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83892677479412,0.150238058906597,0.113432183160021,2.87023417102179,2.13557388818567,12.7159140695737,4.80145753735044,9.58388521917482,12.1091053821446,8.18914167858995,24.9788971717074,20.0720230632069,0,0,8.89053312503465,1.42003837006646,2.11579406278045,0,0,0,0,0,0,0,0,0,0,0,3.85944562915731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0.871533458600294,0,0,0,0,1.4377491329495,2.29723871668228,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03329280955175,24.6015767452938,1.17141414992713,0,2.27407504055985,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0.744323423456331,6.29194090481056,1.96462066103151,0,3.07024349440022,1.12597744800525,0,0,0.355123450626254,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,1.6068392984416,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,1.39453664789186,0.31481234683064,0,0,0,0,1.11194531462352,2.86249773483982,0,0,1.71567174531442,0,0,0.95460974377781,0,0,0,0,0.202182481573316,1.58510321173008,0,0,0,2.11300293513511,0,0,0,0,0,3.94605796728386,0,0,0.608731130888112,0.30982349809975,0,0,0,0.35667105148125,0,2.53329162357197,1.97576935775941,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,1.21360521749513,0,0,0,0,0.307160702099232,0,0.703347082052564,0,0,0,0,0,0,0,0,38.2578692824023,0,0,0,0,0,0,0,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.844175070377856,1.52581736317083,0.442317039724898,0,0,0,0,0,91.723354956836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.843992258112108,3.4278889713421,0,11.901375185815,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0.91821828489147,0,0,0,0,0,0,0,2.84609546029793,0,3.47119476670262,0,0,0,0.343972064943233,0,0,0,0.193978032976839,0,0,0,0,0.633107959558787,0,0.160317640503067,0,0,0,0,0,0.14405479798815,1.61528296235062,0,0.135904206073614,0.418411385249333,0,0,0,0.958337652243951,0,8.16554338697919,0,0.279282401272254,0.687481272035051,0.717873024576814,0.599037001496973,1.71690419254628,0,0,0.720599767084807,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.485996453264197,0,0,0.0524545881349981,0,0,0,0,0,0,0,2.5926644736038,0,1.19730191562487,0,0,0,0,0,0.258565912723101,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,5.75878281249899,0,1.10929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0.233713309847224,0,0.568209015825267,0.251567901752575,0,0,0,0,0,0.318593534327405,0,0,0,0.265841714557995,3.1304703708704,0,0,0,0,0.107410557042488,0,0.398095888698616,2.00013882331577,0.686791410365586,0.336749488765919,15.1421877874381,0,0,0.521988583930423,0,14.3543934080777,0,0.358177682162975,0,0.219284049578707,4.06385035675526,0,0,0,0,0,7.46595555219346,0,0,0,2.94848863961771,0.245772908753719,5.28280308396568,0,0,0,1.13503190713367,0,0,0,0,0,0,0,0,0,0.123935764259002,0,2.86203915588077,0,0,0,0,0.770750701157514,1.41696576325585,8.93949610720047,0.41023272848151,0,0.899044282034833,0.484426936895553,0,0,0,0,0,44.6217051696586,0,0,0,0,0,0,3.27543835020193,0,0.810451015420736,0.781078098613847,6.40729069153671,0.634158101939068,0,0,0,0,0,0,0,0,0,0,0,4.97315227368514,1.56330385846713,0.263091094251396,0,0,0,0,0,0,41.8899526964125,0.47775168788705,0.0714765441766563,0,0,0,0,0,0,0,0,16.4481481015486,14.571492213816,0,1.3746412112643,2.17144469965024,0.955538938977433,0,0,0,0,2.05325613712494,5.799072156691,0,0,0,0.118920090777569,0,0,0,0.231522474323834,0,0,0,0,0,0,0,2.37897960562944,0,0.386747327841463,0,0,0,0,0,0,0.143339583151451,0,1.08786384305464,0,0,1.11598505450025,2.31087814315709,11.6809171773423,0,0,0,0,0,0,0,0,0,0,0.724030971033267,0,0,0,0,0.112131862580613,0,0.202117188958219,0.435433495793923,0,0.0673520530145875,0.0717222053926763,0,0,7.15073217380694,0,0,0,0,0,0,0,0 | |||
|short_description=p1@BC038189 | |||
}} |
Revision as of 12:36, 22 January 2014
Short description: | p1@BC038189 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC038189_5end |
Coexpression cluster: | NA |
Association with transcript: | -81bp_to_BC038189_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.57e-15 | 23 |
fibroblast | 4.71e-12 | 76 |
Schwann cell | 1.18e-08 | 2 |
fibrocyte | 1.01e-07 | 3 |
tendon cell | 1.01e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 3.49e-10 | 41 |
integument | 1.12e-08 | 46 |
integumental system | 1.12e-08 | 46 |
dense regular connective tissue | 1.01e-07 | 3 |
tendon | 1.01e-07 | 3 |
regular connective tissue | 1.01e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.05e-12 | 5 |
myotonic disease | 1.05e-12 | 5 |
muscle tissue disease | 1.05e-12 | 5 |
myopathy | 1.05e-12 | 5 |
muscular disease | 1.05e-12 | 5 |
myotonic dystrophy | 1.05e-12 | 5 |